PDB Chemical Component AT3
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for AT3
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N1 |
C2 |
1.475 |
1.470 |
| N1 |
C8 |
1.472 |
1.469 |
| N1 |
C9 |
1.468 |
1.468 |
| N1 |
C10 |
1.467 |
1.469 |
| C2 |
C3 |
1.530 |
1.530 |
| C2 |
H2C1 |
1.101 |
1.090 |
| C2 |
H2C2 |
1.100 |
1.090 |
| C3 |
S24 |
1.810 |
1.810 |
| C3 |
H3C1 |
1.100 |
1.090 |
| C3 |
H3C2 |
1.100 |
1.090 |
| C5 |
O7 |
1.431 |
1.213 |
| C5 |
C6 |
1.527 |
1.508 |
| C5 |
S24 |
1.763 |
1.712 |
| C6 |
H6C1 |
1.100 |
1.090 |
| C6 |
H6C2 |
1.100 |
1.090 |
| C6 |
H6C3 |
1.100 |
1.090 |
| C8 |
H8C1 |
1.100 |
1.090 |
| C8 |
H8C2 |
1.100 |
1.091 |
| C8 |
H8C3 |
1.100 |
1.089 |
| C9 |
H9C1 |
1.100 |
1.090 |
| C9 |
H9C2 |
1.100 |
1.090 |
| C9 |
H9C3 |
1.100 |
1.090 |
| C10 |
H103 |
1.100 |
1.090 |
| C10 |
H101 |
1.100 |
1.090 |
| C10 |
H102 |
1.100 |
1.090 |
Bond Angles for AT3
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
N1 |
C8 |
109.9 |
109.4 |
| C2 |
N1 |
C9 |
108.2 |
109.5 |
| C2 |
N1 |
C10 |
111.8 |
109.5 |
| N1 |
C2 |
C3 |
112.6 |
109.5 |
| N1 |
C2 |
H2C1 |
107.7 |
109.4 |
| N1 |
C2 |
H2C2 |
108.4 |
109.4 |
| C8 |
N1 |
C9 |
108.8 |
109.5 |
| C8 |
N1 |
C10 |
110.2 |
109.5 |
| N1 |
C8 |
H8C1 |
109.4 |
109.5 |
| N1 |
C8 |
H8C2 |
109.5 |
109.4 |
| N1 |
C8 |
H8C3 |
109.5 |
109.5 |
| C9 |
N1 |
C10 |
107.8 |
109.5 |
| N1 |
C9 |
H9C1 |
109.5 |
109.5 |
| N1 |
C9 |
H9C2 |
109.4 |
109.5 |
| N1 |
C9 |
H9C3 |
109.5 |
109.5 |
| N1 |
C10 |
H103 |
109.5 |
109.5 |
| N1 |
C10 |
H101 |
109.4 |
109.5 |
| N1 |
C10 |
H102 |
109.5 |
109.5 |
| C3 |
C2 |
H2C1 |
107.7 |
109.5 |
| C3 |
C2 |
H2C2 |
108.4 |
109.5 |
| C2 |
C3 |
S24 |
112.5 |
109.4 |
| C2 |
C3 |
H3C1 |
107.8 |
109.5 |
| C2 |
C3 |
H3C2 |
108.5 |
109.5 |
| H2C1 |
C2 |
H2C2 |
112.0 |
109.5 |
| S24 |
C3 |
H3C1 |
107.8 |
109.5 |
| S24 |
C3 |
H3C2 |
108.5 |
109.5 |
| C3 |
S24 |
C5 |
102.7 |
100.0 |
| H3C1 |
C3 |
H3C2 |
111.8 |
109.5 |
| O7 |
C5 |
C6 |
119.9 |
120.0 |
| O7 |
C5 |
S24 |
120.2 |
120.0 |
| C6 |
C5 |
S24 |
119.9 |
120.0 |
| C5 |
C6 |
H6C1 |
109.4 |
109.5 |
| C5 |
C6 |
H6C2 |
109.5 |
109.5 |
| C5 |
C6 |
H6C3 |
109.5 |
109.5 |
| H6C1 |
C6 |
H6C2 |
109.5 |
109.5 |
| H6C1 |
C6 |
H6C3 |
109.5 |
109.5 |
| H6C2 |
C6 |
H6C3 |
109.5 |
109.4 |
| H8C1 |
C8 |
H8C2 |
109.5 |
109.4 |
| H8C1 |
C8 |
H8C3 |
109.4 |
109.5 |
| H8C2 |
C8 |
H8C3 |
109.5 |
109.5 |
| H9C1 |
C9 |
H9C2 |
109.5 |
109.5 |
| H9C1 |
C9 |
H9C3 |
109.5 |
109.5 |
| H9C2 |
C9 |
H9C3 |
109.5 |
109.5 |
| H103 |
C10 |
H101 |
109.5 |
109.4 |
| H103 |
C10 |
H102 |
109.5 |
109.5 |
| H101 |
C10 |
H102 |
109.5 |
109.5 |
Torsion Angles for AT3
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C8 |
N1 |
C2 |
C9 |
118.7 |
240.0 |
| C8 |
N1 |
C2 |
C10 |
237.3 |
120.0 |
| C2 |
N1 |
C8 |
H8C1 |
256.2 |
60.0 |
| C2 |
N1 |
C8 |
H8C2 |
136.2 |
180.0 |
| C2 |
N1 |
C8 |
H8C3 |
16.1 |
300.0 |
| C9 |
N1 |
C2 |
C10 |
118.6 |
240.0 |
| C2 |
N1 |
C9 |
H9C1 |
235.2 |
60.0 |
| C2 |
N1 |
C9 |
H9C2 |
115.2 |
180.0 |
| C2 |
N1 |
C9 |
H9C3 |
355.2 |
300.0 |
| C2 |
N1 |
C10 |
H103 |
184.3 |
300.0 |
| C2 |
N1 |
C10 |
H101 |
64.3 |
60.0 |
| C2 |
N1 |
C10 |
H102 |
304.3 |
180.0 |
| C3 |
C2 |
N1 |
H2C1 |
118.6 |
120.0 |
| C3 |
C2 |
N1 |
H2C2 |
240.0 |
240.0 |
| N1 |
C2 |
C3 |
S24 |
208.6 |
180.0 |
| N1 |
C2 |
C3 |
H3C1 |
89.9 |
60.0 |
| N1 |
C2 |
C3 |
H3C2 |
328.6 |
300.0 |
| H2C1 |
C2 |
N1 |
H2C2 |
121.3 |
120.0 |
| C2 |
N1 |
C8 |
C9 |
241.7 |
120.0 |
| C2 |
N1 |
C8 |
C10 |
123.7 |
240.0 |
| C8 |
N1 |
C2 |
C3 |
288.2 |
60.0 |
| C8 |
N1 |
C2 |
H2C1 |
169.5 |
300.0 |
| C8 |
N1 |
C2 |
H2C2 |
48.2 |
180.0 |
| C9 |
N1 |
C8 |
C10 |
242.0 |
120.0 |
| C8 |
N1 |
C9 |
H9C1 |
115.9 |
180.0 |
| C8 |
N1 |
C9 |
H9C2 |
355.8 |
300.0 |
| C8 |
N1 |
C9 |
H9C3 |
235.9 |
60.0 |
| C8 |
N1 |
C10 |
H103 |
306.9 |
180.1 |
| C8 |
N1 |
C10 |
H101 |
186.9 |
300.0 |
| C8 |
N1 |
C10 |
H102 |
66.9 |
60.0 |
| H8C1 |
C8 |
N1 |
H8C2 |
120.0 |
240.1 |
| H8C1 |
C8 |
N1 |
H8C3 |
240.1 |
120.0 |
| H8C2 |
C8 |
N1 |
H8C3 |
120.0 |
240.0 |
| C2 |
N1 |
C9 |
C8 |
119.4 |
240.0 |
| C2 |
N1 |
C9 |
C10 |
238.9 |
120.0 |
| C9 |
N1 |
C2 |
C3 |
169.5 |
180.0 |
| C9 |
N1 |
C2 |
H2C1 |
50.9 |
60.0 |
| C9 |
N1 |
C2 |
H2C2 |
289.6 |
300.0 |
| C8 |
N1 |
C9 |
C10 |
119.6 |
240.0 |
| C9 |
N1 |
C8 |
H8C1 |
14.5 |
300.0 |
| C9 |
N1 |
C8 |
H8C2 |
254.5 |
60.0 |
| C9 |
N1 |
C8 |
H8C3 |
134.4 |
180.0 |
| C9 |
N1 |
C10 |
H103 |
65.5 |
60.0 |
| C9 |
N1 |
C10 |
H101 |
305.5 |
180.0 |
| C9 |
N1 |
C10 |
H102 |
185.5 |
300.0 |
| H9C1 |
C9 |
N1 |
H9C2 |
120.0 |
240.0 |
| H9C1 |
C9 |
N1 |
H9C3 |
240.0 |
120.0 |
| H9C2 |
C9 |
N1 |
H9C3 |
120.0 |
240.0 |
| C2 |
N1 |
C10 |
C8 |
237.5 |
119.9 |
| C2 |
N1 |
C10 |
C9 |
118.8 |
240.0 |
| C10 |
N1 |
C2 |
C3 |
50.9 |
300.0 |
| C10 |
N1 |
C2 |
H2C1 |
292.3 |
180.0 |
| C10 |
N1 |
C2 |
H2C2 |
171.0 |
60.0 |
| C8 |
N1 |
C10 |
C9 |
241.4 |
120.0 |
| C10 |
N1 |
C8 |
H8C1 |
132.5 |
180.0 |
| C10 |
N1 |
C8 |
H8C2 |
12.5 |
299.9 |
| C10 |
N1 |
C8 |
H8C3 |
252.5 |
60.0 |
| C10 |
N1 |
C9 |
H9C1 |
356.3 |
300.0 |
| C10 |
N1 |
C9 |
H9C2 |
236.3 |
60.0 |
| C10 |
N1 |
C9 |
H9C3 |
116.3 |
180.0 |
| H103 |
C10 |
N1 |
H101 |
120.0 |
240.1 |
| H103 |
C10 |
N1 |
H102 |
240.0 |
120.0 |
| H101 |
C10 |
N1 |
H102 |
120.0 |
240.0 |
| C3 |
C2 |
N1 |
C8 |
288.2 |
60.0 |
| C3 |
C2 |
N1 |
C9 |
169.5 |
180.0 |
| C3 |
C2 |
N1 |
C10 |
50.9 |
300.0 |
| N1 |
C2 |
C3 |
H2C1 |
241.4 |
240.0 |
| N1 |
C2 |
C3 |
H2C2 |
120.0 |
120.0 |
| H2C1 |
C2 |
C3 |
H2C2 |
238.6 |
240.0 |
| S24 |
C3 |
C2 |
H3C1 |
118.7 |
120.0 |
| S24 |
C3 |
C2 |
H3C2 |
240.0 |
240.0 |
| C2 |
C3 |
S24 |
C5 |
163.6 |
180.0 |
| H3C1 |
C3 |
C2 |
H3C2 |
121.3 |
120.0 |
| H2C1 |
C2 |
N1 |
C8 |
169.5 |
300.0 |
| H2C1 |
C2 |
N1 |
C9 |
50.9 |
60.0 |
| H2C1 |
C2 |
N1 |
C10 |
292.3 |
180.0 |
| N1 |
C2 |
H2C1 |
C3 |
121.8 |
120.0 |
| N1 |
C2 |
H2C1 |
H2C2 |
240.9 |
240.0 |
| C3 |
C2 |
H2C1 |
H2C2 |
119.1 |
120.0 |
| H2C1 |
C2 |
C3 |
S24 |
327.3 |
300.0 |
| H2C1 |
C2 |
C3 |
H3C1 |
208.5 |
180.0 |
| H2C1 |
C2 |
C3 |
H3C2 |
87.3 |
60.0 |
| H2C2 |
C2 |
N1 |
C8 |
48.2 |
180.0 |
| H2C2 |
C2 |
N1 |
C9 |
289.6 |
300.0 |
| H2C2 |
C2 |
N1 |
C10 |
171.0 |
60.0 |
| N1 |
C2 |
H2C2 |
C3 |
237.4 |
240.0 |
| N1 |
C2 |
H2C2 |
H2C1 |
118.7 |
120.0 |
| C3 |
C2 |
H2C2 |
H2C1 |
241.3 |
240.0 |
| H2C2 |
C2 |
C3 |
S24 |
88.6 |
60.0 |
| H2C2 |
C2 |
C3 |
H3C1 |
329.9 |
300.0 |
| H2C2 |
C2 |
C3 |
H3C2 |
208.6 |
180.0 |
| S24 |
C3 |
C2 |
H2C1 |
327.3 |
300.0 |
| S24 |
C3 |
C2 |
H2C2 |
88.6 |
60.0 |
| C2 |
C3 |
S24 |
H3C1 |
241.3 |
240.0 |
| C2 |
C3 |
S24 |
H3C2 |
120.0 |
120.0 |
| H3C1 |
C3 |
S24 |
H3C2 |
238.7 |
240.0 |
| O7 |
C5 |
S24 |
C3 |
80.8 |
-0.0 |
| C6 |
C5 |
S24 |
C3 |
261.0 |
180.0 |
| H3C1 |
C3 |
C2 |
H2C1 |
208.5 |
180.0 |
| H3C1 |
C3 |
C2 |
H2C2 |
329.9 |
300.0 |
| C2 |
C3 |
H3C1 |
S24 |
121.7 |
120.0 |
| C2 |
C3 |
H3C1 |
H3C2 |
240.8 |
240.0 |
| S24 |
C3 |
H3C1 |
H3C2 |
119.2 |
120.0 |
| H3C1 |
C3 |
S24 |
C5 |
282.3 |
300.0 |
| H3C2 |
C3 |
C2 |
H2C1 |
87.3 |
60.0 |
| H3C2 |
C3 |
C2 |
H2C2 |
208.6 |
180.0 |
| C2 |
C3 |
H3C2 |
S24 |
237.5 |
240.0 |
| C2 |
C3 |
H3C2 |
H3C1 |
118.8 |
120.0 |
| S24 |
C3 |
H3C2 |
H3C1 |
241.2 |
240.0 |
| H3C2 |
C3 |
S24 |
C5 |
43.5 |
60.0 |
| C3 |
S24 |
C5 |
O7 |
80.8 |
-0.0 |
| C6 |
C5 |
O7 |
S24 |
179.7 |
180.0 |
| O7 |
C5 |
C6 |
H6C1 |
123.0 |
-0.0 |
| O7 |
C5 |
C6 |
H6C2 |
3.0 |
120.0 |
| O7 |
C5 |
C6 |
H6C3 |
243.0 |
240.0 |
| C3 |
S24 |
C5 |
C6 |
261.0 |
180.0 |
| O7 |
C5 |
C6 |
S24 |
180.3 |
180.0 |
| H6C1 |
C6 |
C5 |
H6C2 |
120.0 |
240.0 |
| H6C1 |
C6 |
C5 |
H6C3 |
240.0 |
120.0 |
| H6C2 |
C6 |
C5 |
H6C3 |
120.0 |
240.0 |
| C5 |
S24 |
C3 |
H3C1 |
282.3 |
300.0 |
| C5 |
S24 |
C3 |
H3C2 |
43.5 |
60.0 |
| O7 |
C5 |
S24 |
C6 |
179.7 |
180.0 |
| S24 |
C5 |
C6 |
H6C1 |
302.7 |
180.0 |
| S24 |
C5 |
C6 |
H6C2 |
182.7 |
300.0 |
| S24 |
C5 |
C6 |
H6C3 |
62.7 |
60.0 |
| H6C1 |
C6 |
C5 |
S24 |
302.7 |
180.0 |
| C5 |
C6 |
H6C1 |
H6C2 |
240.0 |
120.0 |
| C5 |
C6 |
H6C1 |
H6C3 |
120.0 |
240.0 |
| H6C2 |
C6 |
H6C1 |
H6C3 |
240.0 |
120.0 |
| H6C2 |
C6 |
C5 |
S24 |
182.7 |
300.0 |
| C5 |
C6 |
H6C2 |
H6C1 |
120.0 |
240.0 |
| C5 |
C6 |
H6C2 |
H6C3 |
240.0 |
120.0 |
| H6C1 |
C6 |
H6C2 |
H6C3 |
120.0 |
240.0 |
| H6C3 |
C6 |
C5 |
S24 |
62.7 |
60.0 |
| C5 |
C6 |
H6C3 |
H6C1 |
240.0 |
120.0 |
| C5 |
C6 |
H6C3 |
H6C2 |
120.0 |
240.0 |
| H6C1 |
C6 |
H6C3 |
H6C2 |
240.0 |
120.0 |
| H8C1 |
C8 |
N1 |
C9 |
14.5 |
300.0 |
| H8C1 |
C8 |
N1 |
C10 |
132.5 |
180.0 |
| N1 |
C8 |
H8C1 |
H8C2 |
240.0 |
119.9 |
| N1 |
C8 |
H8C1 |
H8C3 |
120.0 |
239.9 |
| H8C2 |
C8 |
H8C1 |
H8C3 |
240.0 |
120.0 |
| H8C2 |
C8 |
N1 |
C9 |
254.5 |
60.0 |
| H8C2 |
C8 |
N1 |
C10 |
12.5 |
299.9 |
| N1 |
C8 |
H8C2 |
H8C1 |
120.0 |
240.0 |
| N1 |
C8 |
H8C2 |
H8C3 |
240.0 |
120.0 |
| H8C1 |
C8 |
H8C2 |
H8C3 |
120.0 |
240.0 |
| H8C3 |
C8 |
N1 |
C9 |
134.4 |
180.0 |
| H8C3 |
C8 |
N1 |
C10 |
252.5 |
60.0 |
| N1 |
C8 |
H8C3 |
H8C1 |
240.1 |
120.0 |
| N1 |
C8 |
H8C3 |
H8C2 |
120.0 |
240.0 |
| H8C1 |
C8 |
H8C3 |
H8C2 |
240.0 |
120.0 |
| H9C1 |
C9 |
N1 |
C10 |
356.3 |
300.0 |
| N1 |
C9 |
H9C1 |
H9C2 |
240.0 |
120.0 |
| N1 |
C9 |
H9C1 |
H9C3 |
120.0 |
240.0 |
| H9C2 |
C9 |
H9C1 |
H9C3 |
240.0 |
120.0 |
| H9C2 |
C9 |
N1 |
C10 |
236.3 |
60.0 |
| N1 |
C9 |
H9C2 |
H9C1 |
120.0 |
240.0 |
| N1 |
C9 |
H9C2 |
H9C3 |
240.0 |
120.0 |
| H9C1 |
C9 |
H9C2 |
H9C3 |
120.0 |
240.0 |
| H9C3 |
C9 |
N1 |
C10 |
116.3 |
180.0 |
| N1 |
C9 |
H9C3 |
H9C1 |
240.0 |
120.0 |
| N1 |
C9 |
H9C3 |
H9C2 |
120.0 |
240.0 |
| H9C1 |
C9 |
H9C3 |
H9C2 |
240.0 |
120.0 |
| N1 |
C10 |
H103 |
H101 |
240.0 |
120.0 |
| N1 |
C10 |
H103 |
H102 |
120.0 |
240.0 |
| H101 |
C10 |
H103 |
H102 |
240.0 |
120.0 |
| N1 |
C10 |
H101 |
H103 |
120.0 |
240.0 |
| N1 |
C10 |
H101 |
H102 |
240.0 |
120.0 |
| H103 |
C10 |
H101 |
H102 |
120.0 |
240.0 |
| N1 |
C10 |
H102 |
H103 |
240.0 |
120.0 |
| N1 |
C10 |
H102 |
H101 |
120.0 |
240.0 |
| H103 |
C10 |
H102 |
H101 |
240.0 |
120.0 |