PDB Chemical Component AS1
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for AS1
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O51 |
C5 |
1.222 |
1.208 |
| O52 |
C5 |
1.245 |
1.342 |
| O52 |
HO |
0.950 |
0.967 |
| C5 |
C4 |
1.534 |
1.507 |
| C4 |
N4 |
1.407 |
1.469 |
| C4 |
C3 |
1.550 |
1.530 |
| C4 |
H4 |
1.100 |
1.090 |
| N4 |
HN41 |
1.000 |
1.010 |
| N4 |
HN42 |
1.000 |
1.009 |
| C3 |
C2 |
1.516 |
1.530 |
| C3 |
H31 |
1.100 |
1.089 |
| C3 |
H32 |
1.100 |
1.090 |
| C2 |
C1 |
1.531 |
1.530 |
| C2 |
H21 |
1.100 |
1.090 |
| C2 |
H22 |
1.100 |
1.090 |
| C1 |
N2 |
1.422 |
1.465 |
| C1 |
H11 |
1.100 |
1.091 |
| C1 |
H12 |
1.100 |
1.089 |
| N2 |
C |
1.429 |
1.375 |
| N2 |
HN2 |
1.000 |
0.970 |
| C |
N3 |
1.464 |
1.303 |
| C |
N1 |
1.453 |
1.375 |
| N3 |
HN3 |
1.000 |
0.970 |
| N1 |
CA |
1.512 |
1.465 |
| N1 |
HN1 |
1.000 |
0.970 |
| CA |
CG |
1.530 |
1.507 |
| CA |
CB |
1.535 |
1.530 |
| CA |
HA |
1.100 |
1.090 |
| CG |
OG2 |
1.304 |
1.209 |
| CG |
OG1 |
1.246 |
1.343 |
| OG1 |
HO1 |
0.950 |
0.967 |
| CB |
CD |
1.533 |
1.506 |
| CB |
HB1 |
1.099 |
1.090 |
| CB |
HB2 |
1.100 |
1.090 |
| CD |
OD1 |
1.302 |
1.208 |
| CD |
OD2 |
1.254 |
1.342 |
| OD2 |
HO2 |
0.950 |
0.968 |
Bond Angles for AS1
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O51 |
C5 |
O52 |
122.6 |
120.0 |
| O51 |
C5 |
C4 |
112.8 |
120.0 |
| C5 |
O52 |
HO |
109.5 |
120.0 |
| O52 |
C5 |
C4 |
124.7 |
120.0 |
| C5 |
C4 |
N4 |
113.2 |
109.5 |
| C5 |
C4 |
C3 |
111.5 |
109.4 |
| C5 |
C4 |
H4 |
104.6 |
109.5 |
| N4 |
C4 |
C3 |
106.6 |
109.5 |
| N4 |
C4 |
H4 |
109.7 |
109.5 |
| C4 |
N4 |
HN41 |
109.5 |
106.7 |
| C4 |
N4 |
HN42 |
109.5 |
106.7 |
| C3 |
C4 |
H4 |
111.3 |
109.4 |
| C4 |
C3 |
C2 |
104.9 |
109.5 |
| C4 |
C3 |
H31 |
112.0 |
109.5 |
| C4 |
C3 |
H32 |
111.0 |
109.5 |
| HN41 |
N4 |
HN42 |
109.4 |
106.7 |
| C2 |
C3 |
H31 |
112.0 |
109.5 |
| C2 |
C3 |
H32 |
111.0 |
109.4 |
| C3 |
C2 |
C1 |
126.1 |
109.5 |
| C3 |
C2 |
H21 |
100.4 |
109.5 |
| C3 |
C2 |
H22 |
104.3 |
109.5 |
| H31 |
C3 |
H32 |
106.0 |
109.5 |
| C1 |
C2 |
H21 |
100.4 |
109.5 |
| C1 |
C2 |
H22 |
104.3 |
109.5 |
| C2 |
C1 |
N2 |
127.0 |
109.5 |
| C2 |
C1 |
H11 |
99.9 |
109.4 |
| C2 |
C1 |
H12 |
104.0 |
109.5 |
| H21 |
C2 |
H22 |
123.7 |
109.4 |
| N2 |
C1 |
H11 |
99.9 |
109.4 |
| N2 |
C1 |
H12 |
104.0 |
109.5 |
| C1 |
N2 |
C |
124.7 |
120.0 |
| C1 |
N2 |
HN2 |
117.6 |
120.0 |
| H11 |
C1 |
H12 |
124.5 |
109.5 |
| C |
N2 |
HN2 |
117.6 |
120.0 |
| N2 |
C |
N3 |
118.2 |
120.0 |
| N2 |
C |
N1 |
129.4 |
120.0 |
| N3 |
C |
N1 |
112.3 |
120.0 |
| C |
N3 |
HN3 |
107.4 |
120.0 |
| C |
N1 |
CA |
148.8 |
120.0 |
| C |
N1 |
HN1 |
105.6 |
120.0 |
| CA |
N1 |
HN1 |
105.6 |
120.0 |
| N1 |
CA |
CG |
121.5 |
109.5 |
| N1 |
CA |
CB |
126.6 |
109.5 |
| N1 |
CA |
HA |
22.8 |
109.5 |
| CG |
CA |
CB |
111.9 |
109.5 |
| CG |
CA |
HA |
144.0 |
109.5 |
| CA |
CG |
OG2 |
120.6 |
120.0 |
| CA |
CG |
OG1 |
119.3 |
120.0 |
| CB |
CA |
HA |
104.0 |
109.4 |
| CA |
CB |
CD |
105.9 |
109.5 |
| CA |
CB |
HB1 |
111.5 |
109.5 |
| CA |
CB |
HB2 |
110.7 |
109.4 |
| OG2 |
CG |
OG1 |
120.1 |
120.0 |
| CG |
OG1 |
HO1 |
109.5 |
119.9 |
| CD |
CB |
HB1 |
111.5 |
109.5 |
| CD |
CB |
HB2 |
110.7 |
109.5 |
| CB |
CD |
OD1 |
114.4 |
120.0 |
| CB |
CD |
OD2 |
96.6 |
120.0 |
| HB1 |
CB |
HB2 |
106.7 |
109.4 |
| OD1 |
CD |
OD2 |
118.0 |
120.0 |
| CD |
OD2 |
HO2 |
109.5 |
120.0 |
Torsion Angles for AS1
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O51 |
C5 |
O52 |
HO |
0.0 |
0.0 |
| O52 |
C5 |
O51 |
C4 |
180.0 |
180.1 |
| O51 |
C5 |
C4 |
N4 |
335.7 |
340.0 |
| O51 |
C5 |
C4 |
C3 |
96.0 |
100.0 |
| O51 |
C5 |
C4 |
H4 |
216.4 |
220.0 |
| O51 |
C5 |
O52 |
C4 |
179.9 |
179.9 |
| O52 |
C5 |
C4 |
N4 |
155.7 |
160.0 |
| O52 |
C5 |
C4 |
C3 |
275.9 |
280.0 |
| O52 |
C5 |
C4 |
H4 |
36.4 |
39.9 |
| HO |
O52 |
C5 |
C4 |
180.1 |
180.1 |
| O51 |
C5 |
C4 |
O52 |
180.1 |
180.1 |
| C4 |
C5 |
O52 |
HO |
180.1 |
180.1 |
| N4 |
C4 |
C5 |
C3 |
239.8 |
240.0 |
| N4 |
C4 |
C5 |
H4 |
119.3 |
120.0 |
| C5 |
C4 |
N4 |
HN41 |
188.2 |
60.0 |
| C5 |
C4 |
N4 |
HN42 |
68.2 |
173.7 |
| C3 |
C4 |
C5 |
H4 |
239.6 |
240.0 |
| C5 |
C4 |
C3 |
C2 |
85.0 |
175.0 |
| C5 |
C4 |
C3 |
H31 |
323.2 |
295.0 |
| C5 |
C4 |
C3 |
H32 |
205.0 |
55.0 |
| C5 |
C4 |
N4 |
C3 |
123.0 |
120.0 |
| C5 |
C4 |
N4 |
H4 |
243.6 |
239.9 |
| C3 |
C4 |
N4 |
H4 |
120.7 |
120.0 |
| N4 |
C4 |
C3 |
C2 |
208.9 |
295.0 |
| N4 |
C4 |
C3 |
H31 |
87.2 |
55.0 |
| N4 |
C4 |
C3 |
H32 |
328.9 |
175.0 |
| HN41 |
N4 |
C4 |
HN42 |
120.0 |
246.3 |
| C5 |
C4 |
C3 |
N4 |
236.0 |
240.0 |
| C5 |
C4 |
C3 |
H4 |
116.4 |
120.0 |
| N4 |
C4 |
C3 |
H4 |
240.4 |
240.0 |
| C3 |
C4 |
N4 |
HN41 |
65.2 |
300.1 |
| C3 |
C4 |
N4 |
HN42 |
305.2 |
53.8 |
| C2 |
C3 |
C4 |
H31 |
121.7 |
240.0 |
| C2 |
C3 |
C4 |
H32 |
240.0 |
120.0 |
| C4 |
C3 |
C2 |
C1 |
66.9 |
180.0 |
| C4 |
C3 |
C2 |
H21 |
315.9 |
300.0 |
| C4 |
C3 |
C2 |
H22 |
186.9 |
60.0 |
| H31 |
C3 |
C4 |
H32 |
118.3 |
239.9 |
| C5 |
C4 |
H4 |
N4 |
121.6 |
120.1 |
| C5 |
C4 |
H4 |
C3 |
239.4 |
240.1 |
| N4 |
C4 |
H4 |
C3 |
117.8 |
120.0 |
| H4 |
C4 |
N4 |
HN41 |
304.5 |
180.1 |
| H4 |
C4 |
N4 |
HN42 |
184.6 |
293.8 |
| H4 |
C4 |
C3 |
C2 |
328.5 |
55.0 |
| H4 |
C4 |
C3 |
H31 |
206.8 |
175.0 |
| H4 |
C4 |
C3 |
H32 |
88.6 |
295.0 |
| HN41 |
N4 |
C4 |
C3 |
65.2 |
300.1 |
| HN41 |
N4 |
C4 |
H4 |
304.5 |
180.1 |
| C4 |
N4 |
HN41 |
HN42 |
240.0 |
113.7 |
| HN42 |
N4 |
C4 |
C3 |
305.2 |
53.8 |
| HN42 |
N4 |
C4 |
H4 |
184.6 |
293.8 |
| C4 |
N4 |
HN42 |
HN41 |
120.0 |
246.3 |
| C2 |
C3 |
C4 |
H4 |
328.5 |
55.0 |
| C4 |
C3 |
C2 |
H31 |
238.3 |
120.0 |
| C4 |
C3 |
C2 |
H32 |
120.0 |
240.0 |
| H31 |
C3 |
C2 |
H32 |
241.7 |
120.0 |
| C1 |
C2 |
C3 |
H21 |
111.1 |
240.0 |
| C1 |
C2 |
C3 |
H22 |
240.0 |
120.1 |
| C3 |
C2 |
C1 |
N2 |
180.7 |
180.0 |
| C3 |
C2 |
C1 |
H11 |
70.2 |
300.0 |
| C3 |
C2 |
C1 |
H12 |
300.7 |
60.0 |
| H21 |
C2 |
C3 |
H22 |
128.9 |
240.0 |
| H31 |
C3 |
C4 |
H4 |
206.8 |
175.0 |
| C4 |
C3 |
H31 |
C2 |
117.6 |
240.0 |
| C4 |
C3 |
H31 |
H32 |
238.8 |
120.1 |
| C2 |
C3 |
H31 |
H32 |
121.2 |
240.0 |
| H31 |
C3 |
C2 |
C1 |
188.7 |
60.0 |
| H31 |
C3 |
C2 |
H21 |
77.6 |
180.0 |
| H31 |
C3 |
C2 |
H22 |
308.7 |
300.0 |
| H32 |
C3 |
C4 |
H4 |
88.6 |
295.0 |
| C4 |
C3 |
H32 |
C2 |
243.7 |
120.0 |
| C4 |
C3 |
H32 |
H31 |
121.8 |
240.0 |
| C2 |
C3 |
H32 |
H31 |
238.1 |
120.0 |
| H32 |
C3 |
C2 |
C1 |
306.9 |
300.0 |
| H32 |
C3 |
C2 |
H21 |
195.9 |
60.0 |
| H32 |
C3 |
C2 |
H22 |
66.9 |
180.0 |
| C1 |
C2 |
C3 |
H31 |
188.7 |
60.0 |
| C1 |
C2 |
C3 |
H32 |
306.9 |
300.0 |
| C3 |
C2 |
C1 |
H21 |
248.9 |
120.0 |
| C3 |
C2 |
C1 |
H22 |
120.0 |
239.9 |
| H21 |
C2 |
C1 |
H22 |
231.1 |
119.9 |
| N2 |
C1 |
C2 |
H11 |
110.5 |
240.1 |
| N2 |
C1 |
C2 |
H12 |
240.0 |
120.0 |
| C2 |
C1 |
N2 |
C |
180.2 |
180.0 |
| C2 |
C1 |
N2 |
HN2 |
0.2 |
359.9 |
| H11 |
C1 |
C2 |
H12 |
129.5 |
240.0 |
| H21 |
C2 |
C3 |
H31 |
77.6 |
180.0 |
| H21 |
C2 |
C3 |
H32 |
195.9 |
60.0 |
| C3 |
C2 |
H21 |
C1 |
130.0 |
240.0 |
| C3 |
C2 |
H21 |
H22 |
245.0 |
120.0 |
| C1 |
C2 |
H21 |
H22 |
115.0 |
240.0 |
| H21 |
C2 |
C1 |
N2 |
291.8 |
60.0 |
| H21 |
C2 |
C1 |
H11 |
181.3 |
180.0 |
| H21 |
C2 |
C1 |
H12 |
51.8 |
300.0 |
| H22 |
C2 |
C3 |
H31 |
308.7 |
300.0 |
| H22 |
C2 |
C3 |
H32 |
66.9 |
180.0 |
| C3 |
C2 |
H22 |
C1 |
226.2 |
120.0 |
| C3 |
C2 |
H22 |
H21 |
113.1 |
240.0 |
| C1 |
C2 |
H22 |
H21 |
246.9 |
120.0 |
| H22 |
C2 |
C1 |
N2 |
60.7 |
300.1 |
| H22 |
C2 |
C1 |
H11 |
310.2 |
60.0 |
| H22 |
C2 |
C1 |
H12 |
180.7 |
180.0 |
| N2 |
C1 |
C2 |
H21 |
291.8 |
60.0 |
| N2 |
C1 |
C2 |
H22 |
60.7 |
300.1 |
| C2 |
C1 |
N2 |
H11 |
249.6 |
119.9 |
| C2 |
C1 |
N2 |
H12 |
120.0 |
240.0 |
| H11 |
C1 |
N2 |
H12 |
230.5 |
120.1 |
| C |
N2 |
C1 |
HN2 |
180.0 |
180.1 |
| C1 |
N2 |
C |
N3 |
360.0 |
360.0 |
| C1 |
N2 |
C |
N1 |
180.0 |
180.0 |
| H11 |
C1 |
C2 |
H21 |
181.3 |
180.0 |
| H11 |
C1 |
C2 |
H22 |
310.2 |
60.0 |
| C2 |
C1 |
H11 |
N2 |
130.6 |
240.1 |
| C2 |
C1 |
H11 |
H12 |
245.3 |
120.0 |
| N2 |
C1 |
H11 |
H12 |
114.7 |
239.9 |
| H11 |
C1 |
N2 |
C |
290.6 |
60.1 |
| H11 |
C1 |
N2 |
HN2 |
110.6 |
240.0 |
| H12 |
C1 |
C2 |
H21 |
51.8 |
300.0 |
| H12 |
C1 |
C2 |
H22 |
180.7 |
180.0 |
| C2 |
C1 |
H12 |
N2 |
225.4 |
120.0 |
| C2 |
C1 |
H12 |
H11 |
112.7 |
240.0 |
| N2 |
C1 |
H12 |
H11 |
247.3 |
120.0 |
| H12 |
C1 |
N2 |
C |
60.2 |
300.0 |
| H12 |
C1 |
N2 |
HN2 |
240.2 |
120.0 |
| C |
N2 |
C1 |
H11 |
290.6 |
60.1 |
| C |
N2 |
C1 |
H12 |
60.2 |
300.0 |
| C1 |
N2 |
C |
HN2 |
180.0 |
179.9 |
| N3 |
C |
N2 |
N1 |
179.9 |
180.0 |
| N2 |
C |
N3 |
HN3 |
180.0 |
180.1 |
| N2 |
C |
N1 |
CA |
165.1 |
180.0 |
| N2 |
C |
N1 |
HN1 |
345.0 |
360.0 |
| HN2 |
N2 |
C1 |
H11 |
110.6 |
240.0 |
| HN2 |
N2 |
C1 |
H12 |
240.2 |
120.0 |
| C1 |
N2 |
HN2 |
C |
180.0 |
180.1 |
| HN2 |
N2 |
C |
N3 |
180.0 |
180.0 |
| HN2 |
N2 |
C |
N1 |
0.0 |
0.0 |
| N3 |
C |
N2 |
HN2 |
180.0 |
180.0 |
| N2 |
C |
N3 |
N1 |
180.0 |
180.0 |
| N3 |
C |
N1 |
CA |
345.1 |
360.0 |
| N3 |
C |
N1 |
HN1 |
165.1 |
180.0 |
| N1 |
C |
N2 |
HN2 |
0.0 |
0.0 |
| N2 |
C |
N1 |
N3 |
179.9 |
180.0 |
| N1 |
C |
N3 |
HN3 |
360.0 |
0.1 |
| CA |
N1 |
C |
HN1 |
180.0 |
180.0 |
| C |
N1 |
CA |
CG |
34.2 |
85.0 |
| C |
N1 |
CA |
CB |
213.7 |
205.0 |
| C |
N1 |
CA |
HA |
222.9 |
325.0 |
| HN3 |
N3 |
C |
N1 |
360.0 |
0.1 |
| C |
N1 |
CA |
HN1 |
180.0 |
180.0 |
| CG |
CA |
N1 |
CB |
180.5 |
240.0 |
| CG |
CA |
N1 |
HA |
171.3 |
120.0 |
| N1 |
CA |
CG |
OG2 |
245.2 |
0.1 |
| N1 |
CA |
CG |
OG1 |
65.8 |
179.9 |
| CB |
CA |
N1 |
HA |
350.8 |
240.0 |
| N1 |
CA |
CB |
CD |
306.8 |
65.0 |
| N1 |
CA |
CB |
HB1 |
185.4 |
185.0 |
| N1 |
CA |
CB |
HB2 |
66.9 |
304.9 |
| C |
N1 |
HN1 |
CA |
180.0 |
180.0 |
| HN1 |
N1 |
CA |
CG |
214.2 |
265.0 |
| HN1 |
N1 |
CA |
CB |
33.7 |
25.0 |
| HN1 |
N1 |
CA |
HA |
42.9 |
145.0 |
| CG |
CA |
N1 |
HN1 |
214.2 |
265.0 |
| N1 |
CA |
CG |
CB |
179.5 |
120.0 |
| N1 |
CA |
CG |
HA |
354.3 |
240.0 |
| CB |
CA |
CG |
HA |
174.8 |
120.0 |
| CG |
CA |
CB |
CD |
126.3 |
185.0 |
| CG |
CA |
CB |
HB1 |
5.0 |
305.1 |
| CG |
CA |
CB |
HB2 |
246.4 |
65.0 |
| OG2 |
CG |
CA |
OG1 |
179.4 |
180.1 |
| CA |
CG |
OG1 |
HO1 |
179.4 |
180.0 |
| CB |
CA |
N1 |
HN1 |
33.7 |
25.0 |
| N1 |
CA |
CB |
CG |
180.5 |
240.0 |
| N1 |
CA |
CB |
HA |
3.7 |
120.0 |
| CG |
CA |
CB |
HA |
183.2 |
240.0 |
| CB |
CA |
CG |
OG2 |
65.6 |
240.0 |
| CB |
CA |
CG |
OG1 |
246.2 |
59.9 |
| CD |
CB |
CA |
HB1 |
121.4 |
240.0 |
| CD |
CB |
CA |
HB2 |
240.0 |
120.1 |
| CA |
CB |
CD |
OD1 |
234.7 |
360.0 |
| CA |
CB |
CD |
OD2 |
109.8 |
180.0 |
| HB1 |
CB |
CA |
HB2 |
118.6 |
240.1 |
| HA |
CA |
N1 |
HN1 |
42.9 |
145.0 |
| N1 |
CA |
HA |
CG |
12.6 |
120.0 |
| N1 |
CA |
HA |
CB |
187.6 |
240.0 |
| CG |
CA |
HA |
CB |
175.0 |
120.0 |
| HA |
CA |
CG |
OG2 |
250.9 |
120.1 |
| HA |
CA |
CG |
OG1 |
71.5 |
300.0 |
| HA |
CA |
CB |
CD |
303.2 |
305.0 |
| HA |
CA |
CB |
HB1 |
181.8 |
65.0 |
| HA |
CA |
CB |
HB2 |
63.2 |
184.9 |
| OG2 |
CG |
CA |
CB |
65.6 |
240.0 |
| OG2 |
CG |
CA |
HA |
250.9 |
120.1 |
| CA |
CG |
OG2 |
OG1 |
180.6 |
179.9 |
| OG2 |
CG |
OG1 |
HO1 |
360.0 |
359.9 |
| OG1 |
CG |
CA |
CB |
246.2 |
59.9 |
| OG1 |
CG |
CA |
HA |
71.5 |
300.0 |
| CA |
CG |
OG1 |
OG2 |
179.4 |
180.1 |
| CD |
CB |
CA |
HA |
303.2 |
305.0 |
| CA |
CB |
CD |
HB1 |
238.6 |
120.0 |
| CA |
CB |
CD |
HB2 |
120.0 |
240.0 |
| HB1 |
CB |
CD |
HB2 |
241.4 |
120.0 |
| OD1 |
CD |
CB |
OD2 |
124.9 |
180.0 |
| CB |
CD |
OD2 |
HO2 |
122.3 |
180.0 |
| HB1 |
CB |
CA |
HA |
181.8 |
65.0 |
| CA |
CB |
HB1 |
CD |
118.1 |
240.0 |
| CA |
CB |
HB1 |
HB2 |
239.0 |
119.9 |
| CD |
CB |
HB1 |
HB2 |
121.0 |
240.0 |
| HB1 |
CB |
CD |
OD1 |
356.1 |
239.9 |
| HB1 |
CB |
CD |
OD2 |
231.2 |
60.0 |
| HB2 |
CB |
CA |
HA |
63.2 |
184.9 |
| CA |
CB |
HB2 |
CD |
242.9 |
120.0 |
| CA |
CB |
HB2 |
HB1 |
121.5 |
240.1 |
| CD |
CB |
HB2 |
HB1 |
238.5 |
120.0 |
| HB2 |
CB |
CD |
OD1 |
114.7 |
120.0 |
| HB2 |
CB |
CD |
OD2 |
349.8 |
300.0 |
| OD1 |
CD |
CB |
HB1 |
356.1 |
239.9 |
| OD1 |
CD |
CB |
HB2 |
114.7 |
120.0 |
| CB |
CD |
OD1 |
OD2 |
247.3 |
180.0 |
| OD1 |
CD |
OD2 |
HO2 |
0.0 |
0.0 |
| OD2 |
CD |
CB |
HB1 |
231.2 |
60.0 |
| OD2 |
CD |
CB |
HB2 |
349.8 |
300.0 |
| CB |
CD |
OD2 |
OD1 |
122.3 |
180.0 |