PDB Chemical Component AS

Ideal Model

Chemical Description

Name 2-DEOXY-ADENOSINE -5'-THIO-MONOPHOSPHATE
Formula C10 H14 N5 O5 P S
Formal charge 0
Molecular weight 347.287 g/mol
Component type DNA LINKING
Nonstandard Parent Id DA

Chemical features

Atom count 36
Chiral atom count 3
Chiral atoms C4' C3' C1'
Observed leaving atoms OP3 HO3'
Bond count 38
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) 2'-deoxy-5'-O-thiophosphonoadenosine
Systematic name (OpenEye OEToolkits) (2R,3S,5R)-5-(6-aminopurin-9-yl)-2-(dihydroxyphosphinothioyloxymethyl)oxolan-3-ol

Chemical Descriptors

Stereo SMILES (CACTVS) Nc1ncnc2n(cnc12)[C@H]3C[C@H](O)[C@@H](CO[P](O)(O)=S)O3
SMILES (CACTVS) Nc1ncnc2n(cnc12)[CH]3C[CH](O)[CH](CO[P](O)(O)=S)O3
Stereo SMILES (OpenEye) c1nc(c2c(n1)n(cn2)[C@H]3C[C@@H]([C@H](O3)COP(=S)(O)O)O)N
InChI descriptor InChI=1S/C10H14N5O5PS/c11-9-8-10(13-3-12-9)15(4-14-8)7-1-5(16)6(20-7)2-19-21(17,18)22/h3-7,16H,1-2H2,(H2,11,12,13)(H2,17,18,22)/t5-,6+,7+/m0/s1
InChIKey descriptor ULJYSQHUKIZEGB-RRKCRQDMSA-N

Status Information

Last modified 2011-06-04
Created 1999-07-08
Release status REL
Model PDB code 8PSH
Processing site RCSB