PDB Chemical Component ARO
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for ARO
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N |
CA |
1.465 |
1.468 |
N |
H |
1.020 |
1.009 |
N |
H2 |
1.020 |
1.009 |
CA |
C |
1.536 |
1.507 |
CA |
CB |
1.539 |
1.530 |
CA |
HA |
1.115 |
1.090 |
C |
O |
1.235 |
1.342 |
C |
OXT |
1.334 |
1.208 |
CB |
CG |
1.525 |
1.530 |
CB |
HB2 |
1.116 |
1.091 |
CB |
HB3 |
1.114 |
1.090 |
CG |
OH |
1.301 |
1.429 |
CG |
CD |
1.528 |
1.530 |
CG |
HG |
1.115 |
1.090 |
OH |
HH |
0.949 |
0.968 |
CD |
NE |
1.461 |
1.465 |
CD |
HD2 |
1.115 |
1.090 |
CD |
HD3 |
1.114 |
1.090 |
NE |
CZ |
1.333 |
1.375 |
NE |
HE |
1.021 |
0.969 |
CZ |
NH1 |
1.329 |
1.339 |
CZ |
NH2 |
1.329 |
1.338 |
NH1 |
HH11 |
1.020 |
0.970 |
NH1 |
HH12 |
1.020 |
0.970 |
NH2 |
HH21 |
1.021 |
0.970 |
NH2 |
HH22 |
1.020 |
0.970 |
OXT |
HXT |
0.950 |
|
Bond Angles for ARO
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
CA |
N |
H |
114.1 |
106.7 |
CA |
N |
H2 |
110.5 |
106.7 |
N |
CA |
C |
114.1 |
109.5 |
N |
CA |
CB |
110.3 |
109.5 |
N |
CA |
HA |
105.4 |
109.5 |
H |
N |
H2 |
110.6 |
106.6 |
C |
CA |
CB |
108.8 |
109.5 |
C |
CA |
HA |
107.0 |
109.4 |
CA |
C |
O |
119.9 |
120.0 |
CA |
C |
OXT |
117.6 |
120.0 |
CB |
CA |
HA |
111.2 |
109.4 |
CA |
CB |
CG |
113.1 |
109.5 |
CA |
CB |
HB2 |
110.8 |
109.4 |
CA |
CB |
HB3 |
110.9 |
109.5 |
O |
C |
OXT |
122.4 |
120.0 |
C |
OXT |
HXT |
117.6 |
|
CG |
CB |
HB2 |
110.9 |
109.5 |
CG |
CB |
HB3 |
110.9 |
109.5 |
CB |
CG |
OH |
116.5 |
109.5 |
CB |
CG |
CD |
112.6 |
109.5 |
CB |
CG |
HG |
104.7 |
109.4 |
HB2 |
CB |
HB3 |
99.4 |
109.5 |
OH |
CG |
CD |
116.8 |
109.5 |
OH |
CG |
HG |
99.0 |
109.5 |
CG |
OH |
HH |
116.6 |
106.8 |
CD |
CG |
HG |
104.5 |
109.5 |
CG |
CD |
NE |
115.2 |
109.4 |
CG |
CD |
HD2 |
110.0 |
109.5 |
CG |
CD |
HD3 |
110.1 |
109.5 |
NE |
CD |
HD2 |
110.1 |
109.5 |
NE |
CD |
HD3 |
110.2 |
109.5 |
CD |
NE |
CZ |
125.8 |
120.0 |
CD |
NE |
HE |
106.4 |
120.0 |
HD2 |
CD |
HD3 |
100.1 |
109.4 |
CZ |
NE |
HE |
106.5 |
120.0 |
NE |
CZ |
NH1 |
121.3 |
120.0 |
NE |
CZ |
NH2 |
119.2 |
120.0 |
NH1 |
CZ |
NH2 |
119.5 |
120.0 |
CZ |
NH1 |
HH11 |
121.3 |
120.0 |
CZ |
NH1 |
HH12 |
107.9 |
120.0 |
CZ |
NH2 |
HH21 |
119.5 |
120.0 |
CZ |
NH2 |
HH22 |
119.2 |
120.0 |
HH11 |
NH1 |
HH12 |
108.1 |
120.0 |
HH21 |
NH2 |
HH22 |
121.3 |
120.0 |
Torsion Angles for ARO
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
H |
N |
CA |
H2 |
125.4 |
246.3 |
C |
CA |
N |
CB |
122.8 |
120.0 |
C |
CA |
N |
HA |
242.8 |
240.0 |
N |
CA |
C |
O |
221.3 |
160.0 |
N |
CA |
C |
OXT |
45.0 |
340.0 |
CB |
CA |
N |
HA |
120.1 |
120.0 |
N |
CA |
CB |
CG |
299.3 |
293.7 |
N |
CA |
CB |
HB2 |
64.6 |
53.7 |
N |
CA |
CB |
HB3 |
174.0 |
173.7 |
CA |
N |
H |
H2 |
234.7 |
113.8 |
H |
N |
CA |
C |
180.0 |
69.5 |
H |
N |
CA |
CB |
57.3 |
309.5 |
H |
N |
CA |
HA |
297.2 |
189.5 |
CA |
N |
H2 |
H |
127.4 |
246.2 |
H2 |
N |
CA |
C |
54.7 |
183.2 |
H2 |
N |
CA |
CB |
291.9 |
63.2 |
H2 |
N |
CA |
HA |
171.8 |
303.2 |
C |
CA |
N |
H |
180.0 |
69.5 |
C |
CA |
N |
H2 |
54.7 |
183.2 |
N |
CA |
C |
CB |
236.4 |
240.0 |
N |
CA |
C |
HA |
116.2 |
120.0 |
CB |
CA |
C |
HA |
239.8 |
240.0 |
C |
CA |
CB |
CG |
173.5 |
173.7 |
C |
CA |
CB |
HB2 |
298.7 |
293.7 |
C |
CA |
CB |
HB3 |
48.2 |
53.7 |
O |
C |
CA |
OXT |
176.4 |
180.1 |
CA |
C |
OXT |
HXT |
180.0 |
|
CB |
CA |
N |
H |
57.3 |
309.5 |
CB |
CA |
N |
H2 |
291.9 |
63.2 |
N |
CA |
CB |
C |
125.8 |
120.0 |
N |
CA |
CB |
HA |
243.4 |
240.0 |
C |
CA |
CB |
HA |
117.6 |
120.0 |
CB |
CA |
C |
O |
344.9 |
280.1 |
CB |
CA |
C |
OXT |
168.5 |
100.0 |
CG |
CB |
CA |
HB2 |
234.7 |
240.0 |
CG |
CB |
CA |
HB3 |
125.3 |
120.1 |
CA |
CB |
CG |
OH |
67.0 |
66.5 |
CA |
CB |
CG |
CD |
205.9 |
186.5 |
CA |
CB |
CG |
HG |
318.8 |
306.4 |
HB2 |
CB |
CA |
HB3 |
250.6 |
240.0 |
HA |
CA |
N |
H |
297.2 |
189.5 |
HA |
CA |
N |
H2 |
171.8 |
303.2 |
N |
CA |
HA |
C |
238.2 |
240.0 |
N |
CA |
HA |
CB |
119.5 |
120.0 |
C |
CA |
HA |
CB |
241.3 |
240.0 |
HA |
CA |
C |
O |
105.1 |
40.0 |
HA |
CA |
C |
OXT |
288.7 |
220.0 |
HA |
CA |
CB |
CG |
55.9 |
53.8 |
HA |
CA |
CB |
HB2 |
181.1 |
173.7 |
HA |
CA |
CB |
HB3 |
290.6 |
293.7 |
O |
C |
CA |
CB |
344.9 |
280.1 |
O |
C |
CA |
HA |
105.1 |
40.0 |
CA |
C |
O |
OXT |
183.8 |
179.9 |
O |
C |
OXT |
HXT |
3.8 |
|
OXT |
C |
CA |
CB |
168.5 |
100.0 |
OXT |
C |
CA |
HA |
288.7 |
220.0 |
CA |
C |
OXT |
O |
176.3 |
180.1 |
CG |
CB |
CA |
HA |
55.9 |
53.8 |
CA |
CB |
CG |
HB2 |
125.2 |
119.9 |
CA |
CB |
CG |
HB3 |
234.7 |
240.0 |
HB2 |
CB |
CG |
HB3 |
109.5 |
120.0 |
OH |
CG |
CB |
CD |
221.1 |
240.0 |
OH |
CG |
CB |
HG |
108.1 |
120.0 |
CB |
CG |
OH |
HH |
180.0 |
60.0 |
CD |
CG |
CB |
HG |
247.1 |
240.0 |
CB |
CG |
CD |
NE |
207.0 |
180.0 |
CB |
CG |
CD |
HD2 |
332.3 |
300.0 |
CB |
CG |
CD |
HD3 |
81.7 |
60.0 |
HB2 |
CB |
CA |
HA |
181.1 |
173.7 |
CA |
CB |
HB2 |
CG |
233.5 |
240.0 |
CA |
CB |
HB2 |
HB3 |
116.7 |
120.0 |
CG |
CB |
HB2 |
HB3 |
243.2 |
240.0 |
HB2 |
CB |
CG |
OH |
301.7 |
306.5 |
HB2 |
CB |
CG |
CD |
80.6 |
66.5 |
HB2 |
CB |
CG |
HG |
193.6 |
186.5 |
HB3 |
CB |
CA |
HA |
290.6 |
293.7 |
CA |
CB |
HB3 |
CG |
126.5 |
120.0 |
CA |
CB |
HB3 |
HB2 |
243.3 |
240.0 |
CG |
CB |
HB3 |
HB2 |
116.8 |
120.0 |
HB3 |
CB |
CG |
OH |
192.2 |
186.5 |
HB3 |
CB |
CG |
CD |
331.2 |
306.5 |
HB3 |
CB |
CG |
HG |
84.1 |
66.5 |
OH |
CG |
CB |
HB2 |
301.7 |
306.5 |
OH |
CG |
CB |
HB3 |
192.2 |
186.5 |
CB |
CG |
OH |
CD |
137.2 |
120.0 |
CB |
CG |
OH |
HG |
248.5 |
240.0 |
CD |
CG |
OH |
HG |
111.3 |
120.0 |
OH |
CG |
CD |
NE |
345.8 |
300.0 |
OH |
CG |
CD |
HD2 |
111.1 |
60.0 |
OH |
CG |
CD |
HD3 |
220.5 |
180.0 |
CD |
CG |
CB |
HB2 |
80.6 |
66.5 |
CD |
CG |
CB |
HB3 |
331.2 |
306.5 |
CB |
CG |
CD |
OH |
221.2 |
240.0 |
CB |
CG |
CD |
HG |
113.1 |
119.9 |
OH |
CG |
CD |
HG |
251.9 |
239.9 |
CD |
CG |
OH |
HH |
42.8 |
300.0 |
NE |
CD |
CG |
HD2 |
234.8 |
240.0 |
NE |
CD |
CG |
HD3 |
125.3 |
120.0 |
CG |
CD |
NE |
CZ |
201.6 |
180.0 |
CG |
CD |
NE |
HE |
76.3 |
360.0 |
HD2 |
CD |
CG |
HD3 |
250.5 |
240.0 |
HG |
CG |
CB |
HB2 |
193.6 |
186.5 |
HG |
CG |
CB |
HB3 |
84.1 |
66.5 |
CB |
CG |
HG |
OH |
120.6 |
120.0 |
CB |
CG |
HG |
CD |
241.4 |
240.1 |
OH |
CG |
HG |
CD |
120.8 |
120.0 |
HG |
CG |
OH |
HH |
291.5 |
180.0 |
HG |
CG |
CD |
NE |
93.9 |
60.1 |
HG |
CG |
CD |
HD2 |
219.2 |
180.0 |
HG |
CG |
CD |
HD3 |
328.6 |
300.0 |
HH |
OH |
CG |
CD |
42.8 |
300.0 |
HH |
OH |
CG |
HG |
291.5 |
180.0 |
NE |
CD |
CG |
HG |
93.9 |
60.1 |
CG |
CD |
NE |
HD2 |
125.2 |
120.0 |
CG |
CD |
NE |
HD3 |
234.7 |
240.0 |
HD2 |
CD |
NE |
HD3 |
109.5 |
120.0 |
CZ |
NE |
CD |
HE |
125.3 |
180.1 |
CD |
NE |
CZ |
NH1 |
0.6 |
360.0 |
CD |
NE |
CZ |
NH2 |
183.5 |
180.0 |
HD2 |
CD |
CG |
HG |
219.2 |
180.0 |
CG |
CD |
HD2 |
NE |
231.9 |
240.0 |
CG |
CD |
HD2 |
HD3 |
115.9 |
120.0 |
NE |
CD |
HD2 |
HD3 |
244.0 |
240.0 |
HD2 |
CD |
NE |
CZ |
76.4 |
60.0 |
HD2 |
CD |
NE |
HE |
311.1 |
239.9 |
HD3 |
CD |
CG |
HG |
328.6 |
300.0 |
CG |
CD |
HD3 |
NE |
128.2 |
120.0 |
CG |
CD |
HD3 |
HD2 |
244.1 |
240.0 |
NE |
CD |
HD3 |
HD2 |
116.0 |
120.0 |
HD3 |
CD |
NE |
CZ |
326.9 |
300.0 |
HD3 |
CD |
NE |
HE |
201.6 |
120.0 |
CZ |
NE |
CD |
HD2 |
76.4 |
60.0 |
CZ |
NE |
CD |
HD3 |
326.9 |
300.0 |
CD |
NE |
CZ |
HE |
234.7 |
179.9 |
NH1 |
CZ |
NE |
NH2 |
177.1 |
180.0 |
NE |
CZ |
NH1 |
HH11 |
180.0 |
360.0 |
NE |
CZ |
NH1 |
HH12 |
54.7 |
180.1 |
NE |
CZ |
NH2 |
HH21 |
357.2 |
180.0 |
NE |
CZ |
NH2 |
HH22 |
180.0 |
360.0 |
HE |
NE |
CD |
HD2 |
311.1 |
239.9 |
HE |
NE |
CD |
HD3 |
201.6 |
120.0 |
CD |
NE |
HE |
CZ |
136.3 |
180.1 |
HE |
NE |
CZ |
NH1 |
125.9 |
180.0 |
HE |
NE |
CZ |
NH2 |
308.7 |
0.1 |
NH1 |
CZ |
NE |
HE |
125.9 |
180.0 |
NE |
CZ |
NH1 |
NH2 |
182.9 |
180.0 |
NH1 |
CZ |
NH2 |
HH21 |
180.0 |
0.0 |
NH1 |
CZ |
NH2 |
HH22 |
2.8 |
180.0 |
HH11 |
NH1 |
CZ |
HH12 |
125.3 |
179.9 |
NH2 |
CZ |
NE |
HE |
308.7 |
0.1 |
NE |
CZ |
NH2 |
NH1 |
177.2 |
180.0 |
NH2 |
CZ |
NH1 |
HH11 |
357.1 |
180.0 |
NH2 |
CZ |
NH1 |
HH12 |
231.8 |
0.0 |
HH21 |
NH2 |
CZ |
HH22 |
177.2 |
180.0 |
HH11 |
NH1 |
CZ |
NH2 |
357.1 |
180.0 |
CZ |
NH1 |
HH11 |
HH12 |
234.8 |
180.1 |
HH12 |
NH1 |
CZ |
NH2 |
231.8 |
0.0 |
CZ |
NH1 |
HH12 |
HH11 |
132.8 |
179.9 |
CZ |
NH2 |
HH21 |
HH22 |
182.8 |
180.0 |
CZ |
NH2 |
HH22 |
HH21 |
177.2 |
180.0 |