PDB Chemical Component ARL

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for ARL

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C16 C9 1.556 1.507
C16 H161 1.115 1.090
C16 H162 1.115 1.090
C16 H163 1.115 1.090
C9 C13 1.496 1.406
C9 C14 1.372 1.361
C13 C8 1.342 1.361
C13 H13 1.103 1.080
C8 C44 1.466 1.410
C8 H8 1.103 1.080
C44 C42 1.392 1.353
C44 H44 1.102 1.080
C42 C7 1.563 1.507
C42 C3 1.543 1.469
C7 H71 1.115 1.090
C7 H72 1.115 1.090
C7 H73 1.115 1.090
C3 C4 1.462 1.400
C3 C2 1.465 1.399
C4 C5 1.479 1.378
C4 H4 1.103 1.080
C5 C6 1.460 1.384
C5 C23 1.590 1.507
C6 C1 1.464 1.384
C6 H6 1.102 1.081
C1 C2 1.469 1.378
C1 C10 1.590 1.507
C2 H2 1.103 1.080
C10 C11 1.560 1.530
C10 C15 1.534 1.529
C10 C19 1.550 1.530
C11 H111 1.115 1.089
C11 H112 1.115 1.090
C11 H113 1.115 1.090
C15 H151 1.115 1.091
C15 H152 1.115 1.091
C15 H153 1.115 1.089
C19 H191 1.115 1.090
C19 H192 1.115 1.089
C19 H193 1.115 1.090
C23 C24 1.543 1.530
C23 C28 1.537 1.530
C23 C32 1.522 1.530
C24 H241 1.114 1.089
C24 H242 1.115 1.090
C24 H243 1.115 1.090
C28 H281 1.115 1.091
C28 H282 1.115 1.090
C28 H283 1.115 1.090
C32 H321 1.115 1.090
C32 H322 1.115 1.090
C32 H323 1.115 1.090
C14 C12 1.506 1.412
C14 H14 1.103 1.080
C12 O2 1.192 1.349
C12 O3 1.212 1.216
O2 HO2 0.950 0.967

Bond Angles for ARL

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C9 C16 H161 109.7 109.4
C9 C16 H162 116.4 109.4
C9 C16 H163 109.7 109.4
C16 C9 C13 116.4 120.0
C16 C9 C14 126.1 120.0
H161 C16 H162 109.7 109.5
H161 C16 H163 100.5 109.5
H162 C16 H163 109.7 109.5
C13 C9 C14 117.6 120.0
C9 C13 C8 127.5 120.0
C9 C13 H13 122.5 120.0
C9 C14 C12 130.3 120.1
C9 C14 H14 109.1 120.0
C8 C13 H13 110.0 119.9
C13 C8 C44 127.6 120.1
C13 C8 H8 111.0 119.9
C44 C8 H8 121.4 120.0
C8 C44 C42 128.7 120.1
C8 C44 H44 118.8 119.9
C42 C44 H44 112.6 120.0
C44 C42 C7 120.7 120.0
C44 C42 C3 121.2 120.0
C7 C42 C3 118.1 120.0
C42 C7 H71 108.2 109.4
C42 C7 H72 120.7 109.4
C42 C7 H73 108.2 109.5
C42 C3 C4 122.5 120.2
C42 C3 C2 121.2 120.2
H71 C7 H72 108.2 109.5
H71 C7 H73 101.7 109.5
H72 C7 H73 108.2 109.5
C4 C3 C2 116.3 119.6
C3 C4 C5 123.6 119.9
C3 C4 H4 117.5 120.0
C3 C2 C1 123.9 119.9
C3 C2 H2 117.9 120.0
C5 C4 H4 118.8 120.1
C4 C5 C6 116.0 120.2
C4 C5 C23 121.9 119.9
C6 C5 C23 122.2 119.9
C5 C6 C1 124.2 120.4
C5 C6 H6 117.8 119.8
C5 C23 C24 115.4 109.5
C5 C23 C28 110.7 109.5
C5 C23 C32 111.4 109.5
C1 C6 H6 118.0 119.8
C6 C1 C2 116.0 120.2
C6 C1 C10 123.3 119.9
C2 C1 C10 120.6 119.9
C1 C2 H2 118.2 120.1
C1 C10 C11 115.8 109.5
C1 C10 C15 110.3 109.5
C1 C10 C19 109.9 109.5
C11 C10 C15 106.5 109.5
C11 C10 C19 104.8 109.4
C10 C11 H111 109.9 109.5
C10 C11 H112 115.7 109.5
C10 C11 H113 109.9 109.5
C15 C10 C19 109.2 109.4
C10 C15 H151 111.9 109.5
C10 C15 H152 110.3 109.5
C10 C15 H153 111.9 109.5
C10 C19 H191 112.0 109.4
C10 C19 H192 110.0 109.5
C10 C19 H193 112.1 109.5
H111 C11 H112 109.9 109.5
H111 C11 H113 100.3 109.5
H112 C11 H113 109.9 109.4
H151 C15 H152 111.9 109.4
H151 C15 H153 98.5 109.5
H152 C15 H153 111.8 109.5
H191 C19 H192 112.0 109.5
H191 C19 H193 98.3 109.5
H192 C19 H193 112.0 109.5
C24 C23 C28 105.6 109.5
C24 C23 C32 106.9 109.5
C23 C24 H241 110.0 109.5
C23 C24 H242 115.4 109.5
C23 C24 H243 110.0 109.5
C28 C23 C32 106.2 109.4
C23 C28 H281 111.7 109.5
C23 C28 H282 110.7 109.5
C23 C28 H283 111.8 109.5
C23 C32 H321 111.5 109.5
C23 C32 H322 111.4 109.4
C23 C32 H323 111.5 109.5
H241 C24 H242 110.1 109.5
H241 C24 H243 100.2 109.5
H242 C24 H243 110.1 109.5
H281 C28 H282 111.8 109.4
H281 C28 H283 98.6 109.4
H282 C28 H283 111.7 109.5
H321 C32 H322 111.5 109.4
H321 C32 H323 98.8 109.5
H322 C32 H323 111.5 109.5
C12 C14 H14 120.6 119.9
C14 C12 O2 124.8 120.0
C14 C12 O3 116.6 119.9
O2 C12 O3 118.7 120.0
C12 O2 HO2 124.8 106.8

Torsion Angles for ARL

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H161 C16 C9 H162 234.8 240.0
H161 C16 C9 H163 109.5 120.0
H162 C16 C9 H163 234.7 240.0
C13 C9 C16 C14 180.1 180.1
C16 C9 C13 C8 360.0 359.9
C16 C9 C13 H13 179.9 180.0
C16 C9 C14 C12 0.4 17.6
C16 C9 C14 H14 180.3 197.5
C9 C16 H161 H162 129.0 120.0
C9 C16 H161 H163 244.5 240.1
H161 C16 C9 C13 54.7 186.3
H161 C16 C9 C14 234.7 6.2
H162 C16 H161 H163 115.5 120.1
C9 C16 H162 H161 234.7 240.0
C9 C16 H162 H163 125.3 120.0
H162 C16 C9 C13 180.0 306.3
H162 C16 C9 C14 359.9 126.2
H161 C16 H162 H163 250.6 239.9
C9 C16 H163 H161 115.5 119.9
C9 C16 H163 H162 231.0 240.0
H163 C16 C9 C13 305.3 66.3
H163 C16 C9 C14 125.2 246.2
H161 C16 H163 H162 115.4 120.1
C13 C9 C16 H161 54.7 186.3
C13 C9 C16 H162 180.0 306.3
C13 C9 C16 H163 305.3 66.3
C16 C9 C13 C14 179.9 179.9
C13 C9 C14 C12 180.3 197.5
C13 C9 C14 H14 0.3 17.4
C8 C13 C9 H13 180.0 180.0
C9 C13 C8 C44 180.7 180.0
C9 C13 C8 H8 0.7 0.0
C14 C9 C16 H161 234.7 6.2
C14 C9 C16 H162 359.9 126.2
C14 C9 C16 H163 125.2 246.2
C16 C9 C14 C13 180.1 180.1
C14 C9 C13 C8 180.0 180.0
C14 C9 C13 H13 0.0 0.1
C12 C14 C9 H14 180.0 180.1
C9 C14 C12 O2 0.3 186.8
C9 C14 C12 O3 180.8 6.8
C8 C13 C9 C14 180.0 180.0
C9 C13 C8 H13 180.0 180.0
C44 C8 C13 H8 180.0 179.9
C13 C8 C44 C42 207.0 185.4
C13 C8 C44 H44 27.0 5.6
H13 C13 C9 C14 0.0 0.1
C9 C13 H13 C8 180.0 180.0
H13 C13 C8 C44 0.7 359.9
H13 C13 C8 H8 180.7 180.0
C44 C8 C13 H13 0.7 359.9
C13 C8 C44 H8 180.0 180.1
C42 C44 C8 H44 180.0 179.8
C8 C44 C42 C7 0.1 354.1
C8 C44 C42 C3 181.3 174.1
H8 C8 C13 H13 180.7 180.0
C13 C8 H8 C44 180.0 179.9
H8 C8 C44 C42 27.0 5.4
H8 C8 C44 H44 207.1 185.6
C42 C44 C8 H8 27.0 5.4
C8 C44 C42 H44 180.0 180.2
C7 C42 C44 C3 178.9 180.0
C44 C42 C7 H71 54.7 5.5
C44 C42 C7 H72 180.0 125.4
C44 C42 C7 H73 305.3 245.5
C44 C42 C3 C4 353.4 120.0
C44 C42 C3 C2 173.0 299.8
H44 C44 C8 H8 207.1 185.6
C8 C44 H44 C42 180.0 179.8
H44 C44 C42 C7 180.1 173.9
H44 C44 C42 C3 1.2 353.9
C7 C42 C44 H44 180.1 173.9
C44 C42 C7 C3 181.1 180.0
C7 C42 C3 C4 174.5 300.0
C7 C42 C3 C2 354.1 119.8
H71 C7 C42 H72 234.7 240.1
H71 C7 C42 H73 109.5 120.0
H72 C7 C42 H73 234.8 239.9
C3 C42 C44 H44 1.2 353.9
C44 C42 C3 C7 178.9 180.0
C3 C42 C7 H71 233.6 185.5
C3 C42 C7 H72 358.9 305.4
C3 C42 C7 H73 124.2 65.5
C4 C3 C42 C2 180.4 180.2
C42 C3 C4 C5 179.3 180.0
C42 C3 C4 H4 359.3 0.0
C42 C3 C2 C1 180.6 179.7
C42 C3 C2 H2 0.6 0.2
H71 C7 C42 C3 233.6 185.5
C42 C7 H71 H72 132.4 119.9
C42 C7 H71 H73 246.2 240.0
H72 C7 H71 H73 113.8 120.0
H72 C7 C42 C3 358.9 305.4
C42 C7 H72 H71 234.7 240.1
C42 C7 H72 H73 125.2 120.1
H71 C7 H72 H73 250.5 240.0
H73 C7 C42 C3 124.2 65.5
C42 C7 H73 H71 113.8 120.0
C42 C7 H73 H72 227.7 240.0
H71 C7 H73 H72 113.8 120.0
C42 C3 C4 C2 179.7 179.8
C4 C3 C2 C1 0.3 359.5
C4 C3 C2 H2 180.2 180.0
C5 C4 C3 H4 180.0 179.9
C3 C4 C5 C6 0.4 0.1
C3 C4 C5 C23 180.1 180.0
C42 C3 C2 C4 180.3 180.2
C2 C3 C4 C5 359.7 0.2
C2 C3 C4 H4 179.7 180.3
C6 C1 C2 C3 359.7 0.6
C3 C2 C1 C10 179.9 180.3
C1 C2 C3 H2 180.0 179.5
C5 C4 C3 C2 359.7 0.2
C3 C4 C5 H4 180.0 180.1
C6 C5 C4 C23 180.3 180.1
C4 C5 C6 C1 359.6 360.0
C4 C5 C6 H6 179.6 179.9
C4 C5 C23 C24 237.6 0.1
C4 C5 C23 C28 117.8 120.1
C4 C5 C23 C32 359.8 240.0
H4 C4 C3 C2 179.7 180.3
C3 C4 H4 C5 180.0 179.9
H4 C4 C5 C6 180.4 180.0
H4 C4 C5 C23 0.1 359.9
C6 C5 C4 H4 180.4 180.0
C4 C5 C6 C23 179.7 179.9
C6 C5 C23 C24 57.3 180.0
C6 C5 C23 C28 297.5 300.0
C6 C5 C23 C32 179.5 59.9
C1 C6 C5 H6 180.0 180.1
C5 C6 C1 C2 0.3 359.7
C5 C6 C1 C10 180.2 180.0
C23 C5 C4 H4 0.1 359.9
C4 C5 C23 C6 180.3 180.1
C23 C5 C6 C1 179.9 180.1
C23 C5 C6 H6 359.9 360.0
C24 C23 C5 C28 119.8 240.0
C24 C23 C5 C32 237.8 120.0
C5 C23 C24 H241 54.7 180.0
C5 C23 C24 H242 180.0 300.0
C5 C23 C24 H243 305.3 60.0
C28 C23 C5 C32 118.0 240.1
C5 C23 C28 H281 54.7 300.0
C5 C23 C28 H282 180.0 60.0
C5 C23 C28 H283 305.3 180.0
C5 C23 C32 H321 54.7 60.1
C5 C23 C32 H322 180.0 180.0
C5 C23 C32 H323 305.3 300.0
C3 C2 C1 C6 359.7 0.6
C1 C6 C5 C23 179.9 180.1
C5 C6 C1 H6 180.0 179.9
C2 C1 C6 C10 180.2 179.7
C6 C1 C2 H2 179.8 180.1
C6 C1 C10 C11 5.8 179.9
C6 C1 C10 C15 244.8 300.0
C6 C1 C10 C19 124.4 60.0
H6 C6 C5 C23 359.9 360.0
C5 C6 H6 C1 180.0 180.1
H6 C6 C1 C2 180.4 179.7
H6 C6 C1 C10 0.2 0.1
C3 C2 C1 H2 180.0 180.5
C2 C1 C6 H6 180.4 179.7
C6 C1 C2 C10 179.8 180.3
C2 C1 C10 C11 185.7 0.2
C2 C1 C10 C15 64.7 120.3
C2 C1 C10 C19 304.2 240.3
C10 C1 C6 H6 0.2 0.1
C6 C1 C10 C2 180.2 179.7
C10 C1 C2 H2 359.9 359.7
C11 C10 C1 C15 121.0 240.0
C11 C10 C1 C19 241.5 120.0
C1 C10 C11 H111 54.8 180.0
C1 C10 C11 H112 180.0 300.0
C1 C10 C11 H113 305.3 60.0
C15 C10 C1 C19 120.5 240.0
C1 C10 C15 H151 54.8 300.0
C1 C10 C15 H152 180.0 59.9
C1 C10 C15 H153 305.2 180.0
C1 C10 C19 H191 54.7 60.0
C1 C10 C19 H192 180.0 180.0
C1 C10 C19 H193 305.3 300.0
C3 C2 H2 C1 180.0 179.5
H2 C2 C1 C10 359.9 359.7
C1 C10 C11 C15 236.9 120.1
C1 C10 C11 C19 121.3 240.0
C15 C10 C11 C19 244.4 119.9
C11 C10 C15 H151 288.4 60.0
C11 C10 C15 H152 53.6 180.0
C11 C10 C15 H153 178.9 300.0
C11 C10 C19 H191 179.8 300.0
C11 C10 C19 H192 305.0 60.0
C11 C10 C19 H193 70.3 180.0
H111 C11 C10 H112 234.8 239.9
H111 C11 C10 H113 109.5 120.0
H112 C11 C10 H113 234.7 240.0
C1 C10 C15 C11 126.4 240.0
C1 C10 C15 C19 239.1 120.0
C11 C10 C15 C19 112.7 240.1
C15 C10 C11 H111 177.8 59.9
C15 C10 C11 H112 303.0 180.0
C15 C10 C11 H113 68.3 299.9
C15 C10 C19 H191 293.5 180.0
C15 C10 C19 H192 58.8 300.0
C15 C10 C19 H193 184.1 60.0
H151 C15 C10 H152 234.7 240.1
H151 C15 C10 H153 109.5 120.0
H152 C15 C10 H153 234.8 239.9
C1 C10 C19 C11 234.9 120.0
C1 C10 C19 C15 121.2 240.0
C11 C10 C19 C15 246.2 120.0
C19 C10 C11 H111 293.4 300.0
C19 C10 C11 H112 58.7 60.0
C19 C10 C11 H113 184.0 180.0
C19 C10 C15 H151 175.7 180.0
C19 C10 C15 H152 301.0 299.9
C19 C10 C15 H153 66.2 60.0
H191 C19 C10 H192 234.7 240.0
H191 C19 C10 H193 109.4 120.0
H192 C19 C10 H193 234.7 240.0
H111 C11 C10 C15 177.8 59.9
H111 C11 C10 C19 293.4 300.0
C10 C11 H111 H112 128.5 120.0
C10 C11 H111 H113 244.3 240.0
H112 C11 H111 H113 115.7 120.0
H112 C11 C10 C15 303.0 180.0
H112 C11 C10 C19 58.7 60.0
C10 C11 H112 H111 234.7 240.0
C10 C11 H112 H113 125.3 120.0
H111 C11 H112 H113 250.5 240.0
H113 C11 C10 C15 68.3 299.9
H113 C11 C10 C19 184.0 180.0
C10 C11 H113 H111 115.8 120.0
C10 C11 H113 H112 231.5 240.0
H111 C11 H113 H112 115.7 120.0
H151 C15 C10 C19 175.7 180.0
C10 C15 H151 H152 124.4 120.0
C10 C15 H151 H153 242.2 240.0
H152 C15 H151 H153 117.8 120.0
H152 C15 C10 C19 301.0 299.9
C10 C15 H152 H151 234.7 240.0
C10 C15 H152 H153 125.3 120.1
H151 C15 H152 H153 250.5 240.0
H153 C15 C10 C19 66.2 60.0
C10 C15 H153 H151 117.8 120.0
C10 C15 H153 H152 235.6 239.9
H151 C15 H153 H152 117.8 119.9
C10 C19 H191 H192 124.1 120.0
C10 C19 H191 H193 242.0 240.0
H192 C19 H191 H193 117.9 120.0
C10 C19 H192 H191 234.7 240.0
C10 C19 H192 H193 125.3 120.0
H191 C19 H192 H193 250.6 240.0
C10 C19 H193 H191 117.9 119.9
C10 C19 H193 H192 235.9 239.9
H191 C19 H193 H192 117.9 120.0
C5 C23 C24 C28 237.4 120.0
C5 C23 C24 C32 124.5 240.0
C28 C23 C24 C32 247.2 119.9
C24 C23 C28 H281 289.1 60.0
C24 C23 C28 H282 54.5 180.0
C24 C23 C28 H283 179.7 300.1
C24 C23 C32 H321 181.7 300.0
C24 C23 C32 H322 306.9 60.0
C24 C23 C32 H323 72.2 180.0
H241 C24 C23 H242 234.7 240.0
H241 C24 C23 H243 109.4 120.0
H242 C24 C23 H243 234.7 240.0
C5 C23 C28 C24 125.6 240.0
C5 C23 C28 C32 238.9 120.0
C24 C23 C28 C32 113.3 240.0
C28 C23 C24 H241 177.3 60.0
C28 C23 C24 H242 302.6 180.0
C28 C23 C24 H243 67.9 300.0
C28 C23 C32 H321 294.0 180.0
C28 C23 C32 H322 59.3 300.0
C28 C23 C32 H323 184.6 60.0
H281 C28 C23 H282 234.7 240.0
H281 C28 C23 H283 109.4 120.0
H282 C28 C23 H283 234.8 239.9
C5 C23 C32 C24 233.0 120.0
C5 C23 C32 C28 120.7 240.0
C24 C23 C32 C28 247.6 120.0
C32 C23 C24 H241 290.2 300.0
C32 C23 C24 H242 55.5 60.0
C32 C23 C24 H243 180.7 180.0
C32 C23 C28 H281 175.8 180.0
C32 C23 C28 H282 301.1 300.0
C32 C23 C28 H283 66.3 60.1
H321 C32 C23 H322 234.7 240.1
H321 C32 C23 H323 109.4 120.0
H322 C32 C23 H323 234.7 240.0
H241 C24 C23 C28 177.3 60.0
H241 C24 C23 C32 290.2 300.0
C23 C24 H241 H242 128.3 120.0
C23 C24 H241 H243 244.2 240.0
H242 C24 H241 H243 115.9 120.0
H242 C24 C23 C28 302.6 180.0
H242 C24 C23 C32 55.5 60.0
C23 C24 H242 H241 234.7 240.0
C23 C24 H242 H243 125.2 120.0
H241 C24 H242 H243 250.5 240.0
H243 C24 C23 C28 67.9 300.0
H243 C24 C23 C32 180.7 180.0
C23 C24 H243 H241 115.8 120.0
C23 C24 H243 H242 231.7 240.0
H241 C24 H243 H242 115.9 120.0
H281 C28 C23 C32 175.8 180.0
C23 C28 H281 H282 124.7 120.0
C23 C28 H281 H283 242.4 240.0
H282 C28 H281 H283 117.6 120.0
H282 C28 C23 C32 301.1 300.0
C23 C28 H282 H281 234.7 240.0
C23 C28 H282 H283 125.3 120.1
H281 C28 H282 H283 250.6 240.0
H283 C28 C23 C32 66.3 60.1
C23 C28 H283 H281 117.6 120.0
C23 C28 H283 H282 235.3 239.9
H281 C28 H283 H282 117.7 120.0
C23 C32 H321 H322 125.2 119.9
C23 C32 H321 H323 242.6 239.9
H322 C32 H321 H323 117.4 120.0
C23 C32 H322 H321 234.7 240.1
C23 C32 H322 H323 125.3 120.1
H321 C32 H322 H323 250.5 240.0
C23 C32 H323 H321 117.4 120.0
C23 C32 H323 H322 234.8 240.0
H321 C32 H323 H322 117.4 120.0
C9 C14 C12 H14 180.0 179.9
O2 C12 C14 O3 179.5 180.0
C14 C12 O2 HO2 180.0 180.0
C9 C14 H14 C12 180.0 180.1
H14 C14 C12 O2 180.3 6.8
H14 C14 C12 O3 0.8 186.8
O2 C12 C14 H14 180.3 6.8
C14 C12 O2 O3 180.5 180.0
O3 C12 C14 H14 0.8 186.8
C14 C12 O3 O2 179.5 180.0
O3 C12 O2 HO2 359.5 360.0
HO2 O2 C12 O3 359.5 360.0