PDB Chemical Component AQO

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for AQO

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.428 1.388
C1 C12 1.414 1.367
C1 HC1 1.103 1.080
C2 C3 1.416 1.366
C2 HC2 1.103 1.080
C3 C4 1.434 1.398
C3 HC3 1.103 1.080
C4 N5 1.400 1.353
C4 C11 1.447 1.412
N5 C6 1.315 1.310
C6 N7 1.399 1.372
C6 N8 1.449 1.363
N7 H71 1.020 0.969
N7 H72 1.020 0.971
N8 C9 1.452 1.352
N8 H8 1.020 0.970
C9 O10 1.244 1.218
C9 C11 1.471 1.468
C11 C12 1.432 1.394
C12 H12 1.103 1.080

Bond Angles for AQO

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C12 119.7 120.7
C2 C1 HC1 120.7 119.7
C1 C2 C3 120.5 121.0
C1 C2 HC2 120.1 119.5
C12 C1 HC1 119.6 119.6
C1 C12 C11 120.5 119.5
C1 C12 H12 119.1 120.3
C3 C2 HC2 119.3 119.5
C2 C3 C4 120.7 119.6
C2 C3 HC3 119.0 120.2
C4 C3 HC3 120.3 120.2
C3 C4 N5 119.6 121.6
C3 C4 C11 118.6 119.2
N5 C4 C11 121.8 119.2
C4 N5 C6 120.7 121.5
C4 C11 C9 118.6 118.2
C4 C11 C12 120.0 119.9
N5 C6 N7 122.4 118.4
N5 C6 N8 122.2 123.1
N7 C6 N8 115.4 118.5
C6 N7 H71 107.7 120.0
C6 N7 H72 122.4 120.0
C6 N8 C9 120.6 120.6
C6 N8 H8 119.6 119.7
H71 N7 H72 107.6 120.0
C9 N8 H8 119.8 119.7
N8 C9 O10 119.0 121.3
N8 C9 C11 116.1 117.5
O10 C9 C11 125.0 121.2
C9 C11 C12 121.4 121.9
C11 C12 H12 120.3 120.2

Torsion Angles for AQO

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C12 C1 C2 HC1 180.0 180.0
C2 C1 C12 C11 360.0 -0.0
C2 C1 C12 H12 180.0 180.0
C3 C2 C1 HC2 180.0 180.0
C1 C2 C3 C4 0.1 -0.0
C1 C2 C3 HC3 180.0 180.0
C2 C1 C12 HC1 180.0 180.0
C12 C1 C2 C3 360.0 -0.0
C12 C1 C2 HC2 180.0 180.0
C4 C11 C12 C1 360.0 -0.0
C9 C11 C12 C1 180.0 180.0
C11 C12 C1 H12 180.0 180.0
C2 C1 HC1 C12 180.0 180.0
HC1 C1 C2 C3 180.0 180.0
HC1 C1 C2 HC2 360.0 360.0
HC1 C1 C12 C11 180.0 180.0
HC1 C1 C12 H12 360.0 360.0
C3 C2 C1 C12 360.0 -0.0
C3 C2 C1 HC1 180.0 180.0
C1 C2 C3 HC2 180.0 180.0
C4 C3 C2 HC3 180.0 180.0
C2 C3 C4 N5 179.8 180.0
C2 C3 C4 C11 359.9 -0.0
HC2 C2 C1 C12 180.0 180.0
HC2 C2 C1 HC1 360.0 360.0
C1 C2 HC2 C3 180.0 180.0
HC2 C2 C3 C4 180.1 180.0
HC2 C2 C3 HC3 0.1 360.0
C4 C3 C2 HC2 180.1 180.0
C2 C3 C4 HC3 180.0 180.0
N5 C4 C3 C11 179.9 180.0
C3 C4 N5 C6 180.0 180.0
C3 C4 C11 C9 180.0 180.0
C3 C4 C11 C12 0.1 -0.0
HC3 C3 C2 HC2 0.1 360.0
C2 C3 HC3 C4 180.0 180.0
HC3 C3 C4 N5 359.8 360.0
HC3 C3 C4 C11 179.9 180.0
N5 C4 C3 HC3 359.8 -0.0
C3 C4 N5 C11 180.1 180.0
N5 C4 C11 C9 0.1 0.0
N5 C4 C11 C12 180.2 180.0
C4 N5 C6 N7 179.9 180.0
C4 N5 C6 N8 0.1 0.2
C1 C12 C11 C4 360.0 -0.0
C11 C4 C3 HC3 179.9 180.0
C3 C4 C11 N5 179.9 180.0
C11 C4 N5 C6 359.9 -0.0
N8 C9 C11 C4 359.9 359.7
O10 C9 C11 C4 179.9 180.0
C9 C11 C4 C12 180.0 180.0
C4 C11 C12 H12 180.0 180.0
C6 N5 C4 C11 359.9 -0.0
N7 C6 N5 N8 179.9 179.8
N5 C6 N7 H71 54.7 360.0
N5 C6 N7 H72 180.0 179.7
N5 C6 N8 C9 360.0 359.5
N5 C6 N8 H8 179.9 180.1
N5 C6 N7 N8 180.1 180.2
N7 C6 N8 C9 180.1 179.7
N7 C6 N8 H8 0.1 0.3
H71 N7 C6 H72 234.7 180.3
N5 C6 N8 N7 179.9 179.8
N8 C6 N7 H71 234.6 179.8
N8 C6 N7 H72 359.9 359.5
C9 N8 C6 H8 180.0 179.5
C6 N8 C9 O10 180.0 180.2
C6 N8 C9 C11 0.1 0.5
H71 N7 C6 N8 234.6 179.8
C6 N7 H71 H72 133.7 179.7
H72 N7 C6 N8 359.9 359.5
C6 N7 H72 H71 234.7 180.3
C4 C11 C9 N8 359.9 359.7
C6 N8 C9 H8 180.0 180.5
O10 C9 N8 C11 180.0 179.7
N8 C9 C11 C12 179.8 179.8
C6 N8 H8 C9 180.0 179.5
H8 N8 C9 O10 0.1 359.7
H8 N8 C9 C11 180.1 180.0
C4 C11 C9 O10 179.9 180.0
O10 C9 N8 H8 0.1 359.7
N8 C9 O10 C11 180.0 180.3
O10 C9 C11 C12 359.9 0.0
C1 C12 C11 C9 180.0 180.0
C4 C11 C9 C12 180.0 180.0
C11 C9 N8 H8 180.1 180.0
N8 C9 C11 O10 180.0 179.7
C9 C11 C12 H12 0.1 360.0
C11 C12 C1 HC1 180.0 180.0
C1 C12 C11 H12 180.0 180.0
C4 C11 C12 C9 180.0 180.0
H12 C12 C1 HC1 360.0 -0.0
C1 C12 H12 C11 180.0 180.0