PDB Chemical Component AQO
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for AQO
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.428 |
1.388 |
C1 |
C12 |
1.414 |
1.367 |
C1 |
HC1 |
1.103 |
1.080 |
C2 |
C3 |
1.416 |
1.366 |
C2 |
HC2 |
1.103 |
1.080 |
C3 |
C4 |
1.434 |
1.398 |
C3 |
HC3 |
1.103 |
1.080 |
C4 |
N5 |
1.400 |
1.353 |
C4 |
C11 |
1.447 |
1.412 |
N5 |
C6 |
1.315 |
1.310 |
C6 |
N7 |
1.399 |
1.372 |
C6 |
N8 |
1.449 |
1.363 |
N7 |
H71 |
1.020 |
0.969 |
N7 |
H72 |
1.020 |
0.971 |
N8 |
C9 |
1.452 |
1.352 |
N8 |
H8 |
1.020 |
0.970 |
C9 |
O10 |
1.244 |
1.218 |
C9 |
C11 |
1.471 |
1.468 |
C11 |
C12 |
1.432 |
1.394 |
C12 |
H12 |
1.103 |
1.080 |
Bond Angles for AQO
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C12 |
119.7 |
120.7 |
C2 |
C1 |
HC1 |
120.7 |
119.7 |
C1 |
C2 |
C3 |
120.5 |
121.0 |
C1 |
C2 |
HC2 |
120.1 |
119.5 |
C12 |
C1 |
HC1 |
119.6 |
119.6 |
C1 |
C12 |
C11 |
120.5 |
119.5 |
C1 |
C12 |
H12 |
119.1 |
120.3 |
C3 |
C2 |
HC2 |
119.3 |
119.5 |
C2 |
C3 |
C4 |
120.7 |
119.6 |
C2 |
C3 |
HC3 |
119.0 |
120.2 |
C4 |
C3 |
HC3 |
120.3 |
120.2 |
C3 |
C4 |
N5 |
119.6 |
121.6 |
C3 |
C4 |
C11 |
118.6 |
119.2 |
N5 |
C4 |
C11 |
121.8 |
119.2 |
C4 |
N5 |
C6 |
120.7 |
121.5 |
C4 |
C11 |
C9 |
118.6 |
118.2 |
C4 |
C11 |
C12 |
120.0 |
119.9 |
N5 |
C6 |
N7 |
122.4 |
118.4 |
N5 |
C6 |
N8 |
122.2 |
123.1 |
N7 |
C6 |
N8 |
115.4 |
118.5 |
C6 |
N7 |
H71 |
107.7 |
120.0 |
C6 |
N7 |
H72 |
122.4 |
120.0 |
C6 |
N8 |
C9 |
120.6 |
120.6 |
C6 |
N8 |
H8 |
119.6 |
119.7 |
H71 |
N7 |
H72 |
107.6 |
120.0 |
C9 |
N8 |
H8 |
119.8 |
119.7 |
N8 |
C9 |
O10 |
119.0 |
121.3 |
N8 |
C9 |
C11 |
116.1 |
117.5 |
O10 |
C9 |
C11 |
125.0 |
121.2 |
C9 |
C11 |
C12 |
121.4 |
121.9 |
C11 |
C12 |
H12 |
120.3 |
120.2 |
Torsion Angles for AQO
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C12 |
C1 |
C2 |
HC1 |
180.0 |
180.0 |
C2 |
C1 |
C12 |
C11 |
360.0 |
-0.0 |
C2 |
C1 |
C12 |
H12 |
180.0 |
180.0 |
C3 |
C2 |
C1 |
HC2 |
180.0 |
180.0 |
C1 |
C2 |
C3 |
C4 |
0.1 |
-0.0 |
C1 |
C2 |
C3 |
HC3 |
180.0 |
180.0 |
C2 |
C1 |
C12 |
HC1 |
180.0 |
180.0 |
C12 |
C1 |
C2 |
C3 |
360.0 |
-0.0 |
C12 |
C1 |
C2 |
HC2 |
180.0 |
180.0 |
C4 |
C11 |
C12 |
C1 |
360.0 |
-0.0 |
C9 |
C11 |
C12 |
C1 |
180.0 |
180.0 |
C11 |
C12 |
C1 |
H12 |
180.0 |
180.0 |
C2 |
C1 |
HC1 |
C12 |
180.0 |
180.0 |
HC1 |
C1 |
C2 |
C3 |
180.0 |
180.0 |
HC1 |
C1 |
C2 |
HC2 |
360.0 |
360.0 |
HC1 |
C1 |
C12 |
C11 |
180.0 |
180.0 |
HC1 |
C1 |
C12 |
H12 |
360.0 |
360.0 |
C3 |
C2 |
C1 |
C12 |
360.0 |
-0.0 |
C3 |
C2 |
C1 |
HC1 |
180.0 |
180.0 |
C1 |
C2 |
C3 |
HC2 |
180.0 |
180.0 |
C4 |
C3 |
C2 |
HC3 |
180.0 |
180.0 |
C2 |
C3 |
C4 |
N5 |
179.8 |
180.0 |
C2 |
C3 |
C4 |
C11 |
359.9 |
-0.0 |
HC2 |
C2 |
C1 |
C12 |
180.0 |
180.0 |
HC2 |
C2 |
C1 |
HC1 |
360.0 |
360.0 |
C1 |
C2 |
HC2 |
C3 |
180.0 |
180.0 |
HC2 |
C2 |
C3 |
C4 |
180.1 |
180.0 |
HC2 |
C2 |
C3 |
HC3 |
0.1 |
360.0 |
C4 |
C3 |
C2 |
HC2 |
180.1 |
180.0 |
C2 |
C3 |
C4 |
HC3 |
180.0 |
180.0 |
N5 |
C4 |
C3 |
C11 |
179.9 |
180.0 |
C3 |
C4 |
N5 |
C6 |
180.0 |
180.0 |
C3 |
C4 |
C11 |
C9 |
180.0 |
180.0 |
C3 |
C4 |
C11 |
C12 |
0.1 |
-0.0 |
HC3 |
C3 |
C2 |
HC2 |
0.1 |
360.0 |
C2 |
C3 |
HC3 |
C4 |
180.0 |
180.0 |
HC3 |
C3 |
C4 |
N5 |
359.8 |
360.0 |
HC3 |
C3 |
C4 |
C11 |
179.9 |
180.0 |
N5 |
C4 |
C3 |
HC3 |
359.8 |
-0.0 |
C3 |
C4 |
N5 |
C11 |
180.1 |
180.0 |
N5 |
C4 |
C11 |
C9 |
0.1 |
0.0 |
N5 |
C4 |
C11 |
C12 |
180.2 |
180.0 |
C4 |
N5 |
C6 |
N7 |
179.9 |
180.0 |
C4 |
N5 |
C6 |
N8 |
0.1 |
0.2 |
C1 |
C12 |
C11 |
C4 |
360.0 |
-0.0 |
C11 |
C4 |
C3 |
HC3 |
179.9 |
180.0 |
C3 |
C4 |
C11 |
N5 |
179.9 |
180.0 |
C11 |
C4 |
N5 |
C6 |
359.9 |
-0.0 |
N8 |
C9 |
C11 |
C4 |
359.9 |
359.7 |
O10 |
C9 |
C11 |
C4 |
179.9 |
180.0 |
C9 |
C11 |
C4 |
C12 |
180.0 |
180.0 |
C4 |
C11 |
C12 |
H12 |
180.0 |
180.0 |
C6 |
N5 |
C4 |
C11 |
359.9 |
-0.0 |
N7 |
C6 |
N5 |
N8 |
179.9 |
179.8 |
N5 |
C6 |
N7 |
H71 |
54.7 |
360.0 |
N5 |
C6 |
N7 |
H72 |
180.0 |
179.7 |
N5 |
C6 |
N8 |
C9 |
360.0 |
359.5 |
N5 |
C6 |
N8 |
H8 |
179.9 |
180.1 |
N5 |
C6 |
N7 |
N8 |
180.1 |
180.2 |
N7 |
C6 |
N8 |
C9 |
180.1 |
179.7 |
N7 |
C6 |
N8 |
H8 |
0.1 |
0.3 |
H71 |
N7 |
C6 |
H72 |
234.7 |
180.3 |
N5 |
C6 |
N8 |
N7 |
179.9 |
179.8 |
N8 |
C6 |
N7 |
H71 |
234.6 |
179.8 |
N8 |
C6 |
N7 |
H72 |
359.9 |
359.5 |
C9 |
N8 |
C6 |
H8 |
180.0 |
179.5 |
C6 |
N8 |
C9 |
O10 |
180.0 |
180.2 |
C6 |
N8 |
C9 |
C11 |
0.1 |
0.5 |
H71 |
N7 |
C6 |
N8 |
234.6 |
179.8 |
C6 |
N7 |
H71 |
H72 |
133.7 |
179.7 |
H72 |
N7 |
C6 |
N8 |
359.9 |
359.5 |
C6 |
N7 |
H72 |
H71 |
234.7 |
180.3 |
C4 |
C11 |
C9 |
N8 |
359.9 |
359.7 |
C6 |
N8 |
C9 |
H8 |
180.0 |
180.5 |
O10 |
C9 |
N8 |
C11 |
180.0 |
179.7 |
N8 |
C9 |
C11 |
C12 |
179.8 |
179.8 |
C6 |
N8 |
H8 |
C9 |
180.0 |
179.5 |
H8 |
N8 |
C9 |
O10 |
0.1 |
359.7 |
H8 |
N8 |
C9 |
C11 |
180.1 |
180.0 |
C4 |
C11 |
C9 |
O10 |
179.9 |
180.0 |
O10 |
C9 |
N8 |
H8 |
0.1 |
359.7 |
N8 |
C9 |
O10 |
C11 |
180.0 |
180.3 |
O10 |
C9 |
C11 |
C12 |
359.9 |
0.0 |
C1 |
C12 |
C11 |
C9 |
180.0 |
180.0 |
C4 |
C11 |
C9 |
C12 |
180.0 |
180.0 |
C11 |
C9 |
N8 |
H8 |
180.1 |
180.0 |
N8 |
C9 |
C11 |
O10 |
180.0 |
179.7 |
C9 |
C11 |
C12 |
H12 |
0.1 |
360.0 |
C11 |
C12 |
C1 |
HC1 |
180.0 |
180.0 |
C1 |
C12 |
C11 |
H12 |
180.0 |
180.0 |
C4 |
C11 |
C12 |
C9 |
180.0 |
180.0 |
H12 |
C12 |
C1 |
HC1 |
360.0 |
-0.0 |
C1 |
C12 |
H12 |
C11 |
180.0 |
180.0 |