PDB Chemical Component APZ

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for APZ

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N10 C5 1.338 1.347
N10 N7 1.396 1.395
N10 H10 1.020 0.970
C5 O11 1.232 1.215
C5 C2 1.467 1.476
C2 C6 1.409 1.389
C2 C1 1.413 1.410
C6 C12 1.402 1.380
C6 H6 1.104 1.080
C12 C9 1.409 1.392
C12 H12 1.104 1.080
C9 C4 1.403 1.392
C9 N13 1.357 1.391
C4 C1 1.404 1.385
C4 H4 1.102 1.080
C1 C3 1.469 1.479
C3 O8 1.229 1.215
C3 N7 1.336 1.347
N7 H7 1.020 0.970
N13 H131 1.020 0.970
N13 H132 1.020 0.969

Bond Angles for APZ

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C5 N10 N7 122.0 122.0
C5 N10 H10 116.8 119.0
N10 C5 O11 120.0 120.2
N10 C5 C2 119.9 119.6
N7 N10 H10 121.3 119.0
N10 N7 C3 121.9 122.0
N10 N7 H7 121.3 119.0
O11 C5 C2 120.1 120.2
C5 C2 C6 122.2 121.5
C5 C2 C1 117.8 118.5
C6 C2 C1 120.0 120.1
C2 C6 C12 120.0 119.7
C2 C6 H6 120.3 120.2
C2 C1 C4 119.8 119.9
C2 C1 C3 119.0 118.6
C12 C6 H6 119.8 120.1
C6 C12 C9 120.0 120.5
C6 C12 H12 119.7 119.8
C9 C12 H12 120.3 119.7
C12 C9 C4 120.2 120.3
C12 C9 N13 120.0 119.8
C4 C9 N13 119.9 119.9
C9 C4 C1 120.1 119.6
C9 C4 H4 119.9 120.2
C9 N13 H131 120.0 120.0
C9 N13 H132 108.5 119.9
C1 C4 H4 120.0 120.2
C4 C1 C3 121.2 121.5
C1 C3 O8 120.2 120.3
C1 C3 N7 119.4 119.4
O8 C3 N7 120.4 120.3
C3 N7 H7 116.8 119.0
H131 N13 H132 108.5 120.0

Torsion Angles for APZ

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
N7 N10 C5 H10 180.0 180.0
C5 N10 N7 C3 359.9 -0.0
C5 N10 N7 H7 179.9 179.9
O11 C5 N10 C2 179.4 180.0
N10 C5 C2 C6 180.4 180.0
N10 C5 C2 C1 359.1 -0.0
C5 N10 N7 H10 180.0 180.0
N7 N10 C5 O11 179.8 180.0
N7 N10 C5 C2 0.4 -0.0
C1 C3 N7 N10 0.3 -0.0
O8 C3 N7 N10 179.9 180.0
C3 N7 N10 H7 180.0 180.1
C5 N10 H10 N7 180.0 180.0
H10 N10 C5 O11 359.9 -0.0
H10 N10 C5 C2 180.5 180.0
H10 N10 N7 C3 179.8 180.0
H10 N10 N7 H7 359.8 359.9
O11 C5 N10 N7 179.8 180.0
O11 C5 N10 H10 359.9 -0.0
N10 C5 O11 C2 180.6 180.0
O11 C5 C2 C6 1.0 -0.0
O11 C5 C2 C1 179.7 180.0
C2 C5 N10 N7 0.4 -0.0
C2 C5 N10 H10 180.5 180.0
N10 C5 C2 O11 179.4 180.0
C6 C2 C5 C1 181.3 180.0
C5 C2 C6 C12 179.5 180.0
C5 C2 C6 H6 359.5 -0.0
C5 C2 C1 C4 180.3 179.8
C5 C2 C1 C3 1.0 360.0
C5 C2 C6 C1 178.7 180.0
C6 C2 C1 C4 359.0 359.8
C6 C2 C1 C3 179.8 180.0
C12 C6 C2 H6 180.0 180.0
C2 C6 C12 C9 359.7 -0.0
C2 C6 C12 H12 179.7 180.0
C5 C2 C1 C6 181.3 180.0
C1 C2 C6 C12 0.8 -0.0
C1 C2 C6 H6 180.8 180.0
C9 C4 C1 C2 0.7 0.5
C2 C1 C4 H4 180.7 180.2
C4 C1 C2 C3 179.3 179.8
C2 C1 C3 O8 179.6 180.0
C2 C1 C3 N7 359.3 -0.0
C12 C6 C2 C1 0.8 -0.0
C2 C6 C12 H6 180.0 180.0
C9 C12 C6 H12 180.0 180.0
C6 C12 C9 C4 360.0 0.2
C6 C12 C9 N13 180.1 180.0
H6 C6 C2 C1 180.8 180.0
C2 C6 H6 C12 180.0 180.0
H6 C6 C12 C9 179.7 180.0
H6 C6 C12 H12 359.7 360.0
C9 C12 C6 H6 179.7 180.0
C6 C12 C9 H12 180.0 180.0
C4 C9 C12 N13 179.9 180.2
C12 C9 C4 C1 359.8 359.5
C12 C9 C4 H4 179.8 179.8
C12 C9 N13 H131 180.0 360.0
C12 C9 N13 H132 54.7 179.7
H12 C12 C6 H6 359.7 360.0
C6 C12 H12 C9 180.0 180.0
H12 C12 C9 C4 180.0 180.2
H12 C12 C9 N13 0.1 0.0
C2 C1 C4 C9 0.7 0.5
C4 C9 C12 H12 180.0 180.2
C12 C9 C4 N13 180.1 179.8
C4 C9 N13 H131 0.1 179.8
C4 C9 N13 H132 234.8 359.5
C1 C4 C9 H4 180.0 179.8
C9 C4 C1 C3 179.9 180.2
N13 C9 C12 H12 0.1 0.0
C12 C9 N13 C4 179.9 180.2
N13 C9 C4 C1 179.7 179.7
N13 C9 C4 H4 359.7 359.9
H131 N13 C9 H132 125.3 180.3
C2 C1 C4 C3 180.7 180.2
C1 C4 C9 N13 179.7 179.7
C9 C4 C1 H4 180.0 180.2
C4 C1 C3 O8 0.3 0.2
C4 C1 C3 N7 180.0 180.2
H4 C4 C9 N13 359.7 359.9
C9 C4 H4 C1 180.0 179.8
H4 C4 C1 C3 359.9 360.0
N10 N7 C3 C1 0.3 360.0
C2 C1 C3 C4 179.3 179.8
C3 C1 C4 H4 359.9 360.0
O8 C3 C1 N7 180.3 180.0
C1 C3 N7 H7 180.3 180.1
N10 N7 C3 O8 179.9 180.0
C1 C3 O8 N7 179.7 180.0
O8 C3 N7 H7 359.9 0.1
C3 N7 N10 H10 179.8 180.0
N10 N7 C3 H7 180.0 179.9
C1 C3 N7 O8 180.3 180.0
H7 N7 N10 H10 359.8 359.9
N10 N7 H7 C3 180.0 180.1
C9 N13 H131 H132 234.7 179.7
C9 N13 H132 H131 131.8 180.3