PDB Chemical Component API

Ideal Model

Chemical Description

Name 2,6-DIAMINOPIMELIC ACID
Formula C7 H14 N2 O4
Formal charge 0
Molecular weight 190.197 g/mol
Component type L-PEPTIDE LINKING
Nonstandard Parent Id LYS

Chemical features

Atom count 27
Chiral atom count 2
Chiral atoms CA C6
Observed leaving atoms OXT HXT H2
Bond count 26
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) (2R,6S)-2,6-diaminoheptanedioic acid
Systematic name (OpenEye OEToolkits) (2S,6R)-2,6-bis(azanyl)heptanedioic acid

Chemical Descriptors

Stereo SMILES (CACTVS) N[C@@H](CCC[C@@H](N)C(O)=O)C(O)=O
SMILES (CACTVS) N[CH](CCC[CH](N)C(O)=O)C(O)=O
Stereo SMILES (OpenEye) C(C[C@H](C(=O)O)N)C[C@@H](C(=O)O)N
InChI descriptor InChI=1S/C7H14N2O4/c8-4(6(10)11)2-1-3-5(9)7(12)13/h4-5H,1-3,8-9H2,(H,10,11)(H,12,13)/t4-,5+
InChIKey descriptor GMKMEZVLHJARHF-SYDPRGILSA-N

Status Information

Last modified 2023-11-03
Created 1999-07-08
Release status REL
Model PDB code 2DAP
Processing site EBI