PDB Chemical Component APG

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for APG

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.405	1.383
C1	C6	1.396	1.382
C1	H1	1.103	1.080
C2	C3	1.392	1.381
C2	H2	1.104	1.080
C3	C4	1.405	1.381
C3	C12	1.551	1.506
C4	C5	1.396	1.383
C4	H4	1.102	1.081
C5	C6	1.394	1.382
C5	H5	1.102	1.080
C6	H6	1.103	1.080
C12	O17	1.426	1.429
C12	C13	1.555	1.506
C12	C14	1.539	1.529
O17	HO17	0.950	0.968
C13	O14	1.229	1.208
C13	O15	1.229	1.342
C14	H141	1.116	1.090
C14	H142	1.115	1.089
C14	H143	1.115	1.090
O15	HO15	0.950	0.967

Bond Angles for APG

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	C6	119.7	120.0
C2	C1	H1	120.4	120.0
C1	C2	C3	120.5	120.0
C1	C2	H2	120.2	120.0
C6	C1	H1	119.9	120.0
C1	C6	C5	119.9	120.0
C1	C6	H6	120.1	120.0
C3	C2	H2	119.3	120.0
C2	C3	C4	119.5	120.0
C2	C3	C12	118.0	120.0
C4	C3	C12	122.4	120.0
C3	C4	C5	120.0	120.0
C3	C4	H4	120.3	120.0
C3	C12	O17	115.2	109.5
C3	C12	C13	116.1	109.5
C3	C12	C14	99.5	109.5
C5	C4	H4	119.7	120.0
C4	C5	C6	120.4	120.0
C4	C5	H5	119.8	120.0
C6	C5	H5	119.7	120.0
C5	C6	H6	120.0	120.0
O17	C12	C13	110.1	109.4
O17	C12	C14	108.9	109.4
C12	O17	HO17	115.3	106.8
C13	C12	C14	105.8	109.5
C12	C13	O14	121.3	120.1
C12	C13	O15	117.6	120.0
C12	C14	H141	99.5	109.4
C12	C14	H142	116.0	109.5
C12	C14	H143	116.1	109.5
O14	C13	O15	121.0	119.9
C13	O15	HO15	117.7	120.1
H141	C14	H142	116.0	109.5
H141	C14	H143	116.1	109.4
H142	C14	H143	94.4	109.4

Torsion Angles for APG

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C6	C1	C2	H1	180.0	180.0
C2	C1	C6	C5	359.9	359.9
C2	C1	C6	H6	179.9	180.0
C3	C2	C1	H2	180.0	180.1
C1	C2	C3	C4	359.6	0.2
C1	C2	C3	C12	183.9	180.0
C2	C1	C6	H1	180.0	180.0
C6	C1	C2	C3	0.3	0.0
C6	C1	C2	H2	180.3	180.0
C4	C5	C6	C1	0.0	359.9
C1	C6	C5	H5	180.0	180.0
C5	C6	C1	H6	180.0	179.9
C2	C1	H1	C6	180.0	180.0
H1	C1	C2	C3	180.3	180.0
H1	C1	C2	H2	0.4	360.0
H1	C1	C6	C5	179.8	179.9
H1	C1	C6	H6	359.8	360.0
C3	C2	C1	C6	0.3	0.0
C3	C2	C1	H1	180.3	180.0
C1	C2	C3	H2	180.0	179.9
C4	C3	C2	C12	175.8	180.2
C2	C3	C4	C5	0.3	359.6
C2	C3	C4	H4	180.2	180.0
C2	C3	C12	O17	347.8	29.9
C2	C3	C12	C13	216.9	270.0
C2	C3	C12	C14	104.0	149.9
H2	C2	C1	C6	180.3	180.0
H2	C2	C1	H1	0.4	360.0
C1	C2	H2	C3	180.0	180.1
H2	C2	C3	C4	179.6	180.3
H2	C2	C3	C12	3.8	0.1
C4	C3	C2	H2	179.6	180.3
C2	C3	C4	C12	184.4	179.8
C4	C3	C12	O17	172.1	209.7
C4	C3	C12	C13	41.3	89.8
C4	C3	C12	C14	288.4	329.7
C5	C4	C3	H4	180.0	179.5
C3	C4	C5	C6	359.9	0.4
C3	C4	C5	H5	179.9	180.3
C12	C3	C2	H2	3.8	0.1
C2	C3	C12	C4	175.6	180.2
C12	C3	C4	C5	175.8	179.8
C12	C3	C4	H4	355.8	0.2
O17	C12	C3	C13	130.8	119.9
O17	C12	C3	C14	243.8	240.0
C3	C12	O17	HO17	180.0	300.0
C13	C12	C3	C14	112.9	120.1
C3	C12	C13	O14	314.6	120.0
C3	C12	C13	O15	137.1	299.9
C3	C12	C14	H141	180.0	60.0
C3	C12	C14	H142	305.2	180.0
C3	C12	C14	H143	54.7	300.0
C1	C6	C5	C4	0.0	359.9
C5	C4	C3	C12	175.8	179.8
C3	C4	C5	H4	180.0	180.5
C6	C5	C4	H5	180.0	180.1
C4	C5	C6	H6	180.0	179.8
H4	C4	C3	C12	355.8	0.2
C3	C4	H4	C5	180.0	179.5
H4	C4	C5	C6	179.9	179.9
H4	C4	C5	H5	359.9	359.8
C5	C6	C1	H1	179.8	179.9
C1	C6	C5	H6	180.0	180.1
C6	C5	C4	H4	179.9	179.9
C4	C5	C6	H5	180.0	179.9
H5	C5	C4	H4	359.9	359.8
C4	C5	H5	C6	180.0	180.1
H5	C5	C6	H6	0.0	359.9
H6	C6	C1	H1	359.8	360.0
C1	C6	H6	C5	180.0	179.9
H6	C6	C5	H5	0.0	359.9
C3	C12	O17	C13	226.3	240.0
C3	C12	O17	C14	110.8	120.0
C13	C12	O17	C14	244.5	240.0
O17	C12	C13	O14	181.3	0.0
O17	C12	C13	O15	3.9	180.0
O17	C12	C14	H141	301.0	180.0
O17	C12	C14	H142	66.2	300.0
O17	C12	C14	H143	175.7	60.1
C3	C12	C13	O17	133.2	120.0
C3	C12	C13	C14	250.7	239.9
O17	C12	C13	C14	117.5	119.9
C13	C12	O17	HO17	313.7	60.0
C13	C12	C14	H141	59.3	299.9
C13	C12	C14	H142	184.4	60.0
C13	C12	C14	H143	294.0	180.0
O14	C13	C12	O15	177.4	180.1
C12	C13	O15	HO15	180.0	180.0
C3	C12	C14	O17	239.0	240.0
C3	C12	C14	C13	120.8	120.0
O17	C12	C14	C13	241.7	240.1
C14	C12	O17	HO17	69.2	180.0
C14	C12	C13	O14	63.8	240.1
C14	C12	C13	O15	246.4	60.0
H141	C14	C12	H142	234.8	240.0
H141	C14	C12	H143	125.3	119.9
H142	C14	C12	H143	250.5	240.0
HO17	O17	C12	C13	313.7	60.0
HO17	O17	C12	C14	69.2	180.0
O14	C13	C12	C14	63.8	240.1
C12	C13	O14	O15	182.7	179.9
O14	C13	O15	HO15	2.6	359.9
O15	C13	C12	C14	246.4	60.0
C12	C13	O15	O14	177.4	180.1
C12	C14	H141	H142	125.2	120.1
C12	C14	H141	H143	234.7	240.0
H142	C14	H141	H143	109.5	119.9
C12	C14	H142	H141	243.8	240.0
C12	C14	H142	H143	121.9	120.1
H141	C14	H142	H143	238.1	240.1
C12	C14	H143	H141	116.3	119.9
C12	C14	H143	H142	238.2	239.9
H141	C14	H143	H142	121.9	120.0