PDB Chemical Component APB

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for APB

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
B	O1	1.600	1.419
B	O2	1.673	1.420
B	C1	1.714	1.570
O1	HO1	0.951	0.967
O2	HO2	0.950	0.967
C1	C2	1.402	1.392
C1	C6	1.393	1.394
C2	C3	1.400	1.386
C2	H2	1.103	1.080
C3	C4	1.395	1.390
C3	N1	1.384	1.397
C4	C5	1.395	1.382
C4	H4	1.103	1.080
C5	C6	1.396	1.380
C5	H5	1.103	1.080
C6	H6	1.103	1.080
N1	HN11	1.020	0.970
N1	HN12	1.020	0.971

Bond Angles for APB

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O1	B	O2	111.1	120.0
O1	B	C1	103.6	120.1
B	O1	HO1	111.1	106.8
O2	B	C1	109.9	120.0
B	O2	HO2	111.1	106.8
B	C1	C2	119.1	120.1
B	C1	C6	122.2	120.1
C2	C1	C6	118.4	119.8
C1	C2	C3	122.4	119.8
C1	C2	H2	118.9	120.1
C1	C6	C5	120.0	120.0
C1	C6	H6	119.9	120.0
C3	C2	H2	118.8	120.1
C2	C3	C4	117.9	120.0
C2	C3	N1	121.5	120.1
C4	C3	N1	120.6	120.0
C3	C4	C5	120.5	120.1
C3	C4	H4	119.8	120.0
C3	N1	HN11	121.4	120.0
C3	N1	HN12	107.9	119.9
C5	C4	H4	119.8	119.9
C4	C5	C6	120.7	120.2
C4	C5	H5	119.6	119.9
C6	C5	H5	119.7	119.9
C5	C6	H6	120.1	120.0
HN11	N1	HN12	107.9	120.0

Torsion Angles for APB

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O2	B	O1	C1	242.0	180.0
O1	B	O2	HO2	180.0	180.0
O1	B	C1	C2	348.6	180.2
O1	B	C1	C6	174.8	-0.0
O1	B	O2	C1	114.1	180.0
O2	B	O1	HO1	180.0	360.0
O2	B	C1	C2	107.4	0.3
O2	B	C1	C6	293.6	180.0
O1	B	C1	O2	241.2	180.0
C1	B	O1	HO1	297.9	180.0
C1	B	O2	HO2	65.9	360.0
C2	C1	B	C6	173.8	180.2
B	C1	C2	C3	183.0	180.2
B	C1	C2	H2	3.0	359.8
B	C1	C6	C5	176.8	180.0
B	C1	C6	H6	356.8	-0.0
HO1	O1	B	O2	180.0	360.0
HO1	O1	B	C1	297.9	180.0
HO2	O2	B	C1	65.9	360.0
B	C1	C2	C6	186.0	179.8
C2	C1	C6	C5	3.0	359.8
C2	C1	C6	H6	183.0	179.8
C3	C2	C1	H2	180.0	180.5
C1	C2	C3	C4	1.4	359.5
C1	C2	C3	N1	180.5	179.7
B	C1	C6	C2	173.8	180.2
C6	C1	C2	C3	357.0	0.5
C6	C1	C2	H2	177.0	180.0
C4	C5	C6	C1	358.4	-0.0
C1	C6	C5	H5	178.4	180.0
C5	C6	C1	H6	180.1	180.0
C3	C2	C1	C6	357.0	0.5
C1	C2	C3	H2	180.0	179.5
C4	C3	C2	N1	180.9	179.8
C2	C3	C4	C5	0.2	0.2
C2	C3	C4	H4	180.2	180.2
C2	C3	N1	HN11	180.0	179.8
C2	C3	N1	HN12	54.8	359.5
H2	C2	C1	C6	177.0	180.0
C1	C2	H2	C3	180.0	180.5
H2	C2	C3	C4	181.4	180.0
H2	C2	C3	N1	0.5	0.2
C4	C3	C2	H2	181.4	180.0
C2	C3	C4	N1	179.1	180.2
C4	C3	N1	HN11	359.0	360.0
C4	C3	N1	HN12	233.9	179.7
C5	C4	C3	H4	179.9	180.1
C3	C4	C5	C6	359.9	-0.0
C3	C4	C5	H5	180.0	180.0
N1	C3	C2	H2	0.5	0.2
C2	C3	N1	C4	180.9	179.8
N1	C3	C4	C5	181.0	180.0
N1	C3	C4	H4	1.1	360.0
HN11	N1	C3	HN12	125.2	180.2
C1	C6	C5	C4	358.4	-0.0
C5	C4	C3	N1	181.0	180.0
C3	C4	C5	H4	180.1	179.9
C6	C5	C4	H5	179.9	180.0
C4	C5	C6	H6	178.5	180.0
H4	C4	C3	N1	1.1	360.0
C3	C4	H4	C5	179.9	180.1
H4	C4	C5	C6	179.9	180.1
H4	C4	C5	H5	359.9	0.1
C1	C6	C5	H6	179.9	180.0
C6	C5	C4	H4	179.9	180.1
C4	C5	C6	H5	180.1	180.0
H5	C5	C4	H4	359.9	0.1
C4	C5	H5	C6	179.9	180.0
H5	C5	C6	H6	358.4	-0.0
C1	C6	H6	C5	180.1	180.0
H6	C6	C5	H5	358.4	-0.0
C3	N1	HN11	HN12	234.8	179.8
C3	N1	HN12	HN11	132.9	180.2