PDB Chemical Component AP4

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for AP4

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
N1	C2	1.351	1.316
N1	C10	1.405	1.338
C2	N2	1.300	1.372
C2	N3	1.370	1.360
N2	HN21	1.020	0.969
N2	HN22	1.020	0.969
N3	C4	1.419	1.352
N3	HN3	1.020	0.970
C4	O4	1.240	1.221
C4	C9	1.424	1.394
N5	C6	1.521	1.484
N5	C9	1.408	1.406
N5	C13	1.522	1.330
C6	C7	1.407	1.532
C6	C11	1.546	1.535
C6	H6	1.115	1.090
C7	N8	1.417	1.451
C7	H71	1.115	1.090
C7	H72	1.116	1.090
N8	C10	1.402	1.383
N8	HN8	1.020	0.970
C10	C9	1.403	1.393
C11	O12	1.406	1.458
C11	H111	1.115	1.089
C11	H112	1.115	1.090
O12	C13	1.429	1.342
C13	O14	1.235	1.216

Bond Angles for AP4

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	N1	C10	120.6	121.0
N1	C2	N2	122.1	119.0
N1	C2	N3	120.3	121.9
N1	C10	N8	118.8	120.9
N1	C10	C9	120.9	119.1
N2	C2	N3	117.6	119.1
C2	N2	HN21	122.1	120.0
C2	N2	HN22	107.7	120.0
C2	N3	C4	121.7	120.0
C2	N3	HN3	117.4	120.0
HN21	N2	HN22	107.7	120.0
C4	N3	HN3	120.9	120.0
N3	C4	O4	121.0	120.9
N3	C4	C9	118.2	118.3
O4	C4	C9	120.8	120.8
C4	C9	N5	122.9	122.7
C4	C9	C10	118.2	119.6
C6	N5	C9	119.6	121.1
C6	N5	C13	105.5	108.4
N5	C6	C7	112.1	106.4
N5	C6	C11	100.6	103.0
N5	C6	H6	117.5	111.8
C9	N5	C13	116.5	130.5
N5	C9	C10	118.9	117.7
N5	C13	O12	107.8	113.3
N5	C13	O14	132.7	123.4
C7	C6	C11	119.1	112.1
C7	C6	H6	98.4	111.5
C6	C7	N8	120.1	109.3
C6	C7	H71	108.4	109.7
C6	C7	H72	108.4	109.7
C11	C6	H6	110.2	111.7
C6	C11	O12	109.3	103.8
C6	C11	H111	112.3	110.5
C6	C11	H112	112.3	110.6
N8	C7	H71	108.5	110.0
N8	C7	H72	108.4	108.3
C7	N8	C10	120.7	121.0
C7	N8	HN8	108.2	119.6
H71	C7	H72	101.5	109.7
C10	N8	HN8	108.2	119.4
N8	C10	C9	120.3	120.0
O12	C11	H111	112.3	110.6
O12	C11	H112	112.3	110.5
C11	O12	C13	109.2	109.4
H111	C11	H112	98.1	110.6
O12	C13	O14	119.4	123.4

Torsion Angles for AP4

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C2	N1	C10	N8	179.6	181.0
C2	N1	C10	C9	359.8	0.5
N2	C2	N1	N3	179.2	179.7
N1	C2	N2	HN21	180.0	0.1
N1	C2	N2	HN22	54.7	179.7
N1	C2	N3	C4	359.4	359.1
N1	C2	N3	HN3	179.4	179.6
C10	N1	C2	N2	179.7	179.9
C10	N1	C2	N3	0.6	0.2
C4	C9	C10	N1	360.0	359.3
N5	C9	C10	N1	180.6	179.3
C7	N8	C10	N1	179.5	195.0
N1	C10	N8	HN8	304.7	16.0
N8	C10	N1	C9	179.8	180.5
N2	C2	N1	C10	179.7	179.9
N1	C2	N2	N3	180.8	180.3
N2	C2	N3	C4	180.1	179.5
N2	C2	N3	HN3	0.2	359.9
HN21	N2	C2	HN22	125.2	180.4
N3	C2	N1	C10	0.6	0.2
N1	C2	N3	N2	179.2	179.7
N3	C2	N2	HN21	359.2	179.8
N3	C2	N2	HN22	233.9	359.4
C4	N3	C2	HN3	180.0	179.5
C2	N3	C4	O4	180.5	180.5
C2	N3	C4	C9	0.4	0.7
HN21	N2	C2	N3	359.2	179.8
C2	N2	HN21	HN22	234.8	179.6
HN22	N2	C2	N3	233.9	359.4
C2	N2	HN22	HN21	133.4	180.4
C2	N3	C4	HN3	180.0	180.5
O4	C4	N3	C9	180.1	179.8
N3	C4	C9	N5	179.3	180.0
N3	C4	C9	C10	359.9	0.1
C2	N3	HN3	C4	180.0	179.5
HN3	N3	C4	O4	0.5	0.0
HN3	N3	C4	C9	180.3	180.2
O4	C4	N3	HN3	0.5	0.0
N3	C4	O4	C9	179.8	180.2
O4	C4	C9	N5	359.1	0.2
O4	C4	C9	C10	179.8	180.2
N1	C10	C9	C4	360.0	359.3
C9	C4	N3	HN3	180.3	180.2
N3	C4	C9	O4	180.1	179.8
C6	N5	C9	C4	196.6	199.0
C4	C9	N5	C13	67.8	21.7
N5	C9	C4	C10	179.3	180.0
N8	C10	C9	C4	180.2	178.8
C4	C9	N5	C6	196.6	199.0
C9	N5	C6	C13	226.3	182.2
C6	N5	C9	C10	16.0	19.0
C6	N5	C13	O12	18.0	346.2
C6	N5	C13	O14	196.2	166.2
C7	C6	N5	C11	127.6	118.0
C7	C6	N5	H6	247.2	238.1
N5	C6	C7	N8	32.1	53.8
N5	C6	C7	H71	157.4	174.5
N5	C6	C7	H72	266.8	295.1
C11	C6	N5	H6	119.6	120.0
N5	C6	C11	O12	26.3	349.8
N5	C6	C11	H111	151.6	108.4
N5	C6	C11	H112	261.1	231.3
N1	C10	C9	N5	180.6	179.3
C4	C9	N5	C10	180.7	180.0
C6	N5	C9	C13	128.8	177.2
C9	N5	C6	C7	328.2	314.7
C9	N5	C6	C11	200.7	196.6
C9	N5	C6	H6	81.0	76.6
C9	N5	C13	O12	153.4	163.7
C9	N5	C13	O14	331.5	343.7
N8	C10	C9	N5	0.8	358.8
C6	N5	C13	C9	224.7	182.5
C13	N5	C6	C7	101.9	132.5
C13	N5	C6	C11	334.3	14.4
C13	N5	C6	H6	214.7	254.4
C13	N5	C9	C10	247.1	201.7
C11	O12	C13	N5	358.9	6.7
O12	C13	N5	O14	181.9	180.1
C7	C6	N5	C9	328.2	314.7
C7	C6	N5	C13	101.9	132.5
N5	C6	C7	C11	243.0	248.2
N5	C6	C7	H6	124.3	122.1
C11	C6	C7	H6	241.2	233.9
C7	C6	C11	O12	263.5	235.9
C7	C6	C11	H111	28.8	354.5
C7	C6	C11	H112	138.2	117.3
N8	C7	C6	H71	234.7	239.2
N8	C7	C6	H72	125.3	118.6
C6	C7	N8	C10	342.4	316.8
C6	C7	N8	HN8	217.1	135.7
H71	C7	C6	H72	250.6	239.4
C11	C6	N5	C9	200.7	196.6
C11	C6	N5	C13	334.3	14.4
N5	C6	C11	C7	122.8	113.9
N5	C6	C11	H6	235.3	239.9
C7	C6	C11	H6	112.5	126.0
C11	C6	C7	N8	149.0	165.6
C11	C6	C7	H71	274.3	286.4
C11	C6	C7	H72	23.8	47.0
O12	C11	C6	H111	234.7	241.4
O12	C11	C6	H112	125.3	118.6
C6	C11	O12	C13	343.7	3.0
H111	C11	C6	H112	250.5	237.2
H6	C6	N5	C9	81.0	76.6
H6	C6	N5	C13	214.7	254.4
N5	C6	H6	C7	239.7	241.1
N5	C6	H6	C11	114.4	114.8
C7	C6	H6	C11	234.7	233.7
H6	C6	C7	N8	267.8	291.7
H6	C6	C7	H71	33.1	52.4
H6	C6	C7	H72	142.5	173.0
H6	C6	C11	O12	151.1	109.9
H6	C6	C11	H111	276.3	228.5
H6	C6	C11	H112	25.8	351.3
N1	C10	N8	C7	179.5	195.0
N8	C7	C6	C11	149.0	165.6
N8	C7	C6	H6	267.8	291.7
C6	C7	N8	H71	125.3	120.6
C6	C7	N8	H72	234.8	240.5
H71	C7	N8	H72	109.5	119.9
C10	N8	C7	HN8	125.2	181.0
C7	N8	C10	C9	359.3	15.5
H71	C7	C6	C11	274.3	286.4
H71	C7	C6	H6	33.1	52.4
C6	C7	H71	N8	228.1	239.7
C6	C7	H71	H72	114.0	120.6
N8	C7	H71	H72	245.9	240.9
H71	C7	N8	C10	217.1	196.2
H71	C7	N8	HN8	91.9	15.2
H72	C7	C6	C11	23.8	47.0
H72	C7	C6	H6	142.5	173.0
C6	C7	H72	N8	131.8	119.2
C6	C7	H72	H71	246.0	239.4
N8	C7	H72	H71	114.1	120.1
H72	C7	N8	C10	107.6	76.2
H72	C7	N8	HN8	342.4	255.2
N1	C10	N8	C9	180.2	179.5
C4	C9	C10	N8	180.2	178.8
N5	C9	C10	N8	0.8	358.8
C10	N8	C7	H71	217.1	196.2
C10	N8	C7	H72	107.6	76.2
C7	N8	C10	HN8	234.8	179.0
HN8	N8	C7	H71	91.9	15.2
HN8	N8	C7	H72	342.4	255.2
C7	N8	HN8	C10	132.3	181.0
HN8	N8	C10	C9	124.5	196.5
N1	C10	C9	N8	179.8	180.5
C4	C9	C10	N5	179.4	180.0
C10	C9	N5	C13	247.1	201.7
C9	C10	N8	HN8	124.5	196.5
N5	C13	O12	C11	358.9	6.7
O12	C11	C6	H6	151.1	109.9
C6	C11	O12	H111	125.3	118.6
C6	C11	O12	H112	234.7	241.4
H111	C11	O12	H112	109.4	122.8
C11	O12	C13	O14	180.5	186.7
H111	C11	C6	H6	276.3	228.5
C6	C11	H111	O12	236.4	245.6
C6	C11	H111	H112	118.2	122.8
O12	C11	H111	H112	241.9	237.2
H111	C11	O12	C13	218.4	244.4
H112	C11	C6	H6	25.8	351.3
C6	C11	H112	O12	123.6	114.4
C6	C11	H112	H111	241.8	237.2
O12	C11	H112	H111	118.1	122.8
H112	C11	O12	C13	109.0	121.6
N5	C13	O12	O14	178.4	179.9
C13	O12	C11	H111	218.4	244.4
C13	O12	C11	H112	109.0	121.6
N5	C13	O14	O12	182.0	180.1