PDB Chemical Component AP2

Ideal Model

Chemical Description

Name PHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER
Formula C11 H17 N5 O9 P2
Formal charge 0
Molecular weight 425.228 g/mol
Component type NON-POLYMER

Chemical features

Atom count 44
Chiral atom count 5
Chiral atoms PA C4' C3' C2' C1'
Bond count 46
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) 5'-O-[(R)-hydroxy(phosphonomethyl)phosphoryl]adenosine
Systematic name (OpenEye OEToolkits) [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]methylphosphonic acid

Chemical Descriptors

Stereo SMILES (CACTVS) Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)C[P](O)(O)=O)[C@@H](O)[C@H]3O
SMILES (CACTVS) Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)C[P](O)(O)=O)[CH](O)[CH]3O
Stereo SMILES (OpenEye) c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@@](=O)(CP(=O)(O)O)O)O)O)N
InChI descriptor InChI=1S/C11H17N5O9P2/c12-9-6-10(14-2-13-9)16(3-15-6)11-8(18)7(17)5(25-11)1-24-27(22,23)4-26(19,20)21/h2-3,5,7-8,11,17-18H,1,4H2,(H,22,23)(H2,12,13,14)(H2,19,20,21)/t5-,7-,8-,11-/m1/s1
InChIKey descriptor OLCWZBFDIYXLAA-IOSLPCCCSA-N

Status Information

Last modified 2011-06-04
Created 1999-07-08
Release status REL
Model PDB code 1AV5
Processing site RCSB