PDB Chemical Component AOS
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for AOS
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
O1 |
1.238 |
1.227 |
C1 |
C2 |
1.524 |
1.515 |
C1 |
H1 |
1.080 |
1.102 |
C2 |
O2 |
1.418 |
1.424 |
C2 |
C3 |
1.540 |
1.534 |
C2 |
H2 |
1.100 |
1.094 |
O2 |
HO2 |
0.950 |
0.971 |
C3 |
O3 |
1.422 |
1.432 |
C3 |
C4 |
1.537 |
1.539 |
C3 |
H3 |
1.100 |
1.097 |
O3 |
HO3 |
0.950 |
0.968 |
C4 |
O4 |
1.423 |
1.431 |
C4 |
C5 |
1.528 |
1.536 |
C4 |
H4 |
1.100 |
1.097 |
O4 |
HO4 |
0.950 |
0.968 |
C5 |
O5 |
1.419 |
1.434 |
C5 |
C6 |
1.520 |
1.525 |
C5 |
H5 |
1.100 |
1.096 |
O5 |
HO5 |
0.950 |
0.968 |
C6 |
O6 |
1.417 |
1.425 |
C6 |
H61 |
1.100 |
1.093 |
C6 |
H62 |
1.100 |
1.095 |
O6 |
HO6 |
0.950 |
0.969 |
Bond Angles for AOS
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C1 |
C2 |
119.8 |
124.3 |
O1 |
C1 |
H1 |
120.1 |
120.1 |
C2 |
C1 |
H1 |
120.1 |
115.6 |
C1 |
C2 |
O2 |
110.2 |
107.6 |
C1 |
C2 |
C3 |
111.3 |
113.9 |
C1 |
C2 |
H2 |
108.1 |
108.4 |
O2 |
C2 |
C3 |
110.4 |
107.9 |
O2 |
C2 |
H2 |
109.0 |
107.4 |
C2 |
O2 |
HO2 |
109.5 |
106.6 |
C3 |
C2 |
H2 |
107.8 |
111.3 |
C2 |
C3 |
O3 |
109.6 |
109.6 |
C2 |
C3 |
C4 |
114.2 |
116.7 |
C2 |
C3 |
H3 |
106.1 |
108.4 |
O3 |
C3 |
C4 |
109.7 |
107.9 |
O3 |
C3 |
H3 |
111.0 |
105.2 |
C3 |
O3 |
HO3 |
109.5 |
106.1 |
C4 |
C3 |
H3 |
106.0 |
108.4 |
C3 |
C4 |
O4 |
109.6 |
109.9 |
C3 |
C4 |
C5 |
112.1 |
115.5 |
C3 |
C4 |
H4 |
107.6 |
109.1 |
O4 |
C4 |
C5 |
109.3 |
107.3 |
O4 |
C4 |
H4 |
110.4 |
105.2 |
C4 |
O4 |
HO4 |
109.5 |
106.2 |
C5 |
C4 |
H4 |
107.8 |
109.4 |
C4 |
C5 |
O5 |
109.8 |
107.9 |
C4 |
C5 |
C6 |
109.4 |
114.0 |
C4 |
C5 |
H5 |
109.3 |
111.2 |
O5 |
C5 |
C6 |
109.4 |
107.0 |
O5 |
C5 |
H5 |
109.3 |
105.8 |
C5 |
O5 |
HO5 |
109.5 |
106.0 |
C6 |
C5 |
H5 |
109.7 |
110.4 |
C5 |
C6 |
O6 |
109.6 |
108.8 |
C5 |
C6 |
H61 |
109.4 |
112.0 |
C5 |
C6 |
H62 |
109.4 |
111.1 |
O6 |
C6 |
H61 |
109.4 |
107.4 |
O6 |
C6 |
H62 |
109.4 |
107.8 |
C6 |
O6 |
HO6 |
109.5 |
106.5 |
H61 |
C6 |
H62 |
109.6 |
109.6 |
Torsion Angles for AOS
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
O1 |
H1 |
180.0 |
181.6 |
O1 |
C1 |
C2 |
O2 |
312.3 |
4.1 |
O1 |
C1 |
C2 |
C3 |
189.5 |
244.5 |
O1 |
C1 |
C2 |
H2 |
71.3 |
120.0 |
O1 |
C1 |
C2 |
H1 |
180.0 |
178.5 |
O2 |
C2 |
C1 |
C3 |
122.8 |
119.6 |
O2 |
C2 |
C1 |
H2 |
241.0 |
244.1 |
C1 |
C2 |
O2 |
HO2 |
239.7 |
88.5 |
C3 |
C2 |
C1 |
H2 |
118.2 |
124.4 |
C1 |
C2 |
C3 |
O3 |
164.3 |
65.7 |
C1 |
C2 |
C3 |
C4 |
40.7 |
302.7 |
C1 |
C2 |
C3 |
H3 |
284.2 |
180.0 |
O1 |
C1 |
H1 |
C2 |
180.0 |
181.5 |
H1 |
C1 |
C2 |
O2 |
132.3 |
185.6 |
H1 |
C1 |
C2 |
C3 |
9.4 |
66.0 |
H1 |
C1 |
C2 |
H2 |
251.3 |
301.5 |
O2 |
C2 |
C1 |
H1 |
132.3 |
185.6 |
C1 |
C2 |
O2 |
C3 |
236.7 |
236.7 |
C1 |
C2 |
O2 |
H2 |
118.5 |
116.6 |
C3 |
C2 |
O2 |
H2 |
241.8 |
239.9 |
O2 |
C2 |
C3 |
O3 |
41.6 |
306.2 |
O2 |
C2 |
C3 |
C4 |
278.0 |
183.3 |
O2 |
C2 |
C3 |
H3 |
161.5 |
60.6 |
C3 |
C2 |
C1 |
H1 |
9.4 |
66.0 |
C1 |
C2 |
C3 |
O2 |
122.7 |
119.5 |
C1 |
C2 |
C3 |
H2 |
241.6 |
237.1 |
O2 |
C2 |
C3 |
H2 |
119.0 |
117.6 |
C3 |
C2 |
O2 |
HO2 |
3.0 |
211.9 |
O3 |
C3 |
C2 |
C4 |
123.6 |
122.9 |
O3 |
C3 |
C2 |
H3 |
240.1 |
245.7 |
C2 |
C3 |
O3 |
HO3 |
239.4 |
39.1 |
C4 |
C3 |
C2 |
H3 |
116.5 |
122.7 |
C2 |
C3 |
C4 |
O4 |
189.6 |
305.1 |
C2 |
C3 |
C4 |
C5 |
68.0 |
183.6 |
C2 |
C3 |
C4 |
H4 |
309.7 |
60.0 |
H2 |
C2 |
C1 |
H1 |
251.3 |
301.5 |
C1 |
C2 |
H2 |
O2 |
240.3 |
243.9 |
C1 |
C2 |
H2 |
C3 |
120.4 |
126.0 |
O2 |
C2 |
H2 |
C3 |
240.1 |
242.1 |
H2 |
C2 |
O2 |
HO2 |
121.2 |
332.0 |
H2 |
C2 |
C3 |
O3 |
282.7 |
188.6 |
H2 |
C2 |
C3 |
C4 |
159.0 |
65.7 |
H2 |
C2 |
C3 |
H3 |
42.6 |
302.9 |
HO2 |
O2 |
C2 |
C3 |
3.0 |
211.9 |
HO2 |
O2 |
C2 |
H2 |
121.2 |
332.0 |
O3 |
C3 |
C2 |
H2 |
282.7 |
188.6 |
C2 |
C3 |
O3 |
C4 |
233.7 |
232.0 |
C2 |
C3 |
O3 |
H3 |
116.9 |
116.4 |
C4 |
C3 |
O3 |
H3 |
243.1 |
244.4 |
O3 |
C3 |
C4 |
O4 |
66.0 |
181.2 |
O3 |
C3 |
C4 |
C5 |
304.5 |
59.8 |
O3 |
C3 |
C4 |
H4 |
186.1 |
296.1 |
C4 |
C3 |
C2 |
H2 |
159.0 |
65.7 |
C2 |
C3 |
C4 |
O3 |
123.6 |
123.8 |
C2 |
C3 |
C4 |
H3 |
243.5 |
237.3 |
O3 |
C3 |
C4 |
H3 |
119.9 |
113.4 |
C4 |
C3 |
O3 |
HO3 |
5.7 |
167.2 |
O4 |
C4 |
C3 |
C5 |
121.6 |
121.5 |
O4 |
C4 |
C3 |
H4 |
239.9 |
245.1 |
C3 |
C4 |
O4 |
HO4 |
62.2 |
283.4 |
C5 |
C4 |
C3 |
H4 |
118.4 |
123.6 |
C3 |
C4 |
C5 |
O5 |
290.1 |
295.3 |
C3 |
C4 |
C5 |
C6 |
170.0 |
176.6 |
C3 |
C4 |
C5 |
H5 |
50.0 |
50.9 |
H3 |
C3 |
C2 |
H2 |
42.6 |
302.9 |
C2 |
C3 |
H3 |
O3 |
241.0 |
242.8 |
C2 |
C3 |
H3 |
C4 |
121.9 |
127.6 |
O3 |
C3 |
H3 |
C4 |
240.9 |
244.8 |
H3 |
C3 |
O3 |
HO3 |
122.6 |
282.8 |
H3 |
C3 |
C4 |
O4 |
306.1 |
67.8 |
H3 |
C3 |
C4 |
C5 |
184.5 |
306.3 |
H3 |
C3 |
C4 |
H4 |
66.2 |
182.7 |
HO3 |
O3 |
C3 |
C4 |
5.7 |
167.2 |
HO3 |
O3 |
C3 |
H3 |
122.6 |
282.8 |
O4 |
C4 |
C3 |
H3 |
306.1 |
67.8 |
C3 |
C4 |
O4 |
C5 |
236.8 |
233.7 |
C3 |
C4 |
O4 |
H4 |
118.3 |
117.3 |
C5 |
C4 |
O4 |
H4 |
241.5 |
243.6 |
O4 |
C4 |
C5 |
O5 |
168.4 |
172.4 |
O4 |
C4 |
C5 |
C6 |
48.3 |
53.6 |
O4 |
C4 |
C5 |
H5 |
288.2 |
288.0 |
C5 |
C4 |
C3 |
H3 |
184.5 |
306.3 |
C3 |
C4 |
C5 |
O4 |
121.7 |
122.9 |
C3 |
C4 |
C5 |
H4 |
241.8 |
236.6 |
O4 |
C4 |
C5 |
H4 |
120.1 |
113.6 |
C5 |
C4 |
O4 |
HO4 |
185.4 |
49.7 |
O5 |
C5 |
C4 |
C6 |
120.1 |
118.7 |
O5 |
C5 |
C4 |
H5 |
240.2 |
244.4 |
C4 |
C5 |
O5 |
HO5 |
178.5 |
320.9 |
C6 |
C5 |
C4 |
H5 |
120.1 |
125.6 |
C4 |
C5 |
C6 |
O6 |
59.1 |
178.6 |
C4 |
C5 |
C6 |
H61 |
179.1 |
60.0 |
C4 |
C5 |
C6 |
H62 |
299.1 |
297.1 |
H4 |
C4 |
C3 |
H3 |
66.2 |
182.7 |
C3 |
C4 |
H4 |
O4 |
240.5 |
242.1 |
C3 |
C4 |
H4 |
C5 |
121.1 |
127.1 |
O4 |
C4 |
H4 |
C5 |
240.6 |
245.0 |
H4 |
C4 |
O4 |
HO4 |
303.9 |
166.1 |
H4 |
C4 |
C5 |
O5 |
48.3 |
58.7 |
H4 |
C4 |
C5 |
C6 |
288.3 |
300.0 |
H4 |
C4 |
C5 |
H5 |
168.2 |
174.4 |
HO4 |
O4 |
C4 |
C5 |
185.4 |
49.7 |
HO4 |
O4 |
C4 |
H4 |
303.9 |
166.1 |
O5 |
C5 |
C4 |
H4 |
48.3 |
58.7 |
C4 |
C5 |
O5 |
C6 |
239.9 |
236.9 |
C4 |
C5 |
O5 |
H5 |
119.8 |
119.1 |
C6 |
C5 |
O5 |
H5 |
239.9 |
242.2 |
O5 |
C5 |
C6 |
O6 |
298.7 |
59.3 |
O5 |
C5 |
C6 |
H61 |
58.7 |
300.8 |
O5 |
C5 |
C6 |
H62 |
178.8 |
177.9 |
C6 |
C5 |
C4 |
H4 |
288.3 |
300.0 |
C4 |
C5 |
C6 |
O5 |
120.3 |
119.2 |
C4 |
C5 |
C6 |
H5 |
240.2 |
234.0 |
O5 |
C5 |
C6 |
H5 |
119.8 |
114.7 |
C6 |
C5 |
O5 |
HO5 |
298.6 |
84.0 |
O6 |
C6 |
C5 |
H61 |
240.0 |
118.6 |
O6 |
C6 |
C5 |
H62 |
120.0 |
241.4 |
C5 |
C6 |
O6 |
HO6 |
347.5 |
8.2 |
H61 |
C6 |
C5 |
H62 |
240.0 |
122.9 |
H5 |
C5 |
C4 |
H4 |
168.2 |
174.4 |
C4 |
C5 |
H5 |
O5 |
239.8 |
243.1 |
C4 |
C5 |
H5 |
C6 |
119.9 |
127.6 |
O5 |
C5 |
H5 |
C6 |
240.1 |
244.5 |
H5 |
C5 |
O5 |
HO5 |
58.6 |
201.8 |
H5 |
C5 |
C6 |
O6 |
178.9 |
304.6 |
H5 |
C5 |
C6 |
H61 |
298.9 |
186.0 |
H5 |
C5 |
C6 |
H62 |
59.0 |
63.1 |
HO5 |
O5 |
C5 |
C6 |
298.6 |
84.0 |
HO5 |
O5 |
C5 |
H5 |
58.6 |
201.8 |
O6 |
C6 |
C5 |
H5 |
178.9 |
304.6 |
C5 |
C6 |
O6 |
H61 |
120.0 |
238.6 |
C5 |
C6 |
O6 |
H62 |
240.1 |
120.6 |
H61 |
C6 |
O6 |
H62 |
120.1 |
242.0 |
H61 |
C6 |
C5 |
H5 |
298.9 |
186.0 |
C5 |
C6 |
H61 |
O6 |
239.9 |
119.4 |
C5 |
C6 |
H61 |
H62 |
119.9 |
236.3 |
O6 |
C6 |
H61 |
H62 |
240.0 |
116.9 |
H61 |
C6 |
O6 |
HO6 |
227.5 |
129.6 |
H62 |
C6 |
C5 |
H5 |
59.0 |
63.1 |
C5 |
C6 |
H62 |
O6 |
120.1 |
240.8 |
C5 |
C6 |
H62 |
H61 |
240.1 |
124.2 |
O6 |
C6 |
H62 |
H61 |
120.0 |
243.4 |
H62 |
C6 |
O6 |
HO6 |
107.4 |
247.7 |
HO6 |
O6 |
C6 |
H61 |
227.5 |
129.6 |
HO6 |
O6 |
C6 |
H62 |
107.4 |
247.7 |