PDB Chemical Component AO8
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for AO8
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C2 |
C3 |
1.365 |
1.362 |
C2 |
C1 |
1.388 |
1.394 |
C3 |
C4 |
1.416 |
1.404 |
C1 |
C |
1.368 |
1.362 |
C17 |
C16 |
1.382 |
1.394 |
C17 |
C12 |
1.395 |
1.394 |
C16 |
C15 |
1.371 |
1.380 |
C11 |
C12 |
1.511 |
1.507 |
C11 |
N2 |
1.462 |
1.469 |
C12 |
C13 |
1.411 |
1.380 |
C9 |
N1 |
1.472 |
1.465 |
C9 |
C10 |
1.514 |
1.531 |
C15 |
C14 |
1.384 |
1.384 |
C13 |
C14 |
1.402 |
1.384 |
N1 |
S |
1.616 |
1.656 |
C4 |
C8 |
1.415 |
1.404 |
C4 |
C5 |
1.421 |
1.419 |
C |
C5 |
1.431 |
1.403 |
C |
S |
1.774 |
1.762 |
C10 |
N2 |
1.465 |
1.469 |
C8 |
N |
1.326 |
1.313 |
C5 |
C6 |
1.414 |
1.406 |
S |
O |
1.431 |
1.421 |
S |
O3 |
1.431 |
1.421 |
N |
C7 |
1.342 |
1.326 |
C6 |
C7 |
1.364 |
1.362 |
C6 |
H1 |
1.080 |
1.081 |
C7 |
H2 |
1.080 |
1.080 |
C8 |
H3 |
1.080 |
1.079 |
C3 |
H4 |
1.080 |
1.080 |
C2 |
H5 |
1.080 |
1.080 |
C1 |
H6 |
1.080 |
1.080 |
N1 |
H7 |
1.000 |
0.969 |
C9 |
H8 |
1.100 |
1.090 |
C9 |
H9 |
1.100 |
1.090 |
C10 |
H10 |
1.100 |
1.090 |
C10 |
H11 |
1.100 |
1.090 |
N2 |
H12 |
1.000 |
1.009 |
C11 |
H14 |
1.100 |
1.089 |
C11 |
H15 |
1.100 |
1.091 |
C16 |
H17 |
1.080 |
1.080 |
C15 |
H18 |
1.080 |
1.079 |
C14 |
H19 |
1.081 |
1.080 |
C13 |
H20 |
1.080 |
1.080 |
C17 |
B1 |
|
1.570 |
B1 |
O1 |
|
1.420 |
B1 |
O2 |
|
1.420 |
O1 |
H13 |
|
0.968 |
O2 |
H16 |
|
0.967 |
Bond Angles for AO8
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C3 |
H4 |
119.6 |
120.2 |
C1 |
C2 |
H5 |
119.6 |
119.5 |
C2 |
C1 |
H6 |
119.8 |
119.5 |
C17 |
C16 |
C15 |
120.0 |
119.9 |
C17 |
C16 |
H17 |
120.0 |
120.0 |
C16 |
C17 |
B1 |
|
120.2 |
C17 |
C12 |
C13 |
119.7 |
119.9 |
C16 |
C15 |
C14 |
120.0 |
120.1 |
C15 |
C16 |
H17 |
120.0 |
120.1 |
C16 |
C15 |
H18 |
120.0 |
120.0 |
C11 |
C12 |
C13 |
120.7 |
120.1 |
C12 |
C11 |
H14 |
108.5 |
109.5 |
C12 |
C11 |
H15 |
108.6 |
109.5 |
C11 |
N2 |
H12 |
108.6 |
111.0 |
C12 |
C13 |
C14 |
117.7 |
120.1 |
C12 |
C13 |
H20 |
121.2 |
119.9 |
C9 |
N1 |
H7 |
106.7 |
120.0 |
C9 |
C10 |
N2 |
110.8 |
109.5 |
C10 |
C9 |
H8 |
108.7 |
109.4 |
C10 |
C9 |
H9 |
108.7 |
109.5 |
C9 |
C10 |
H10 |
109.1 |
109.4 |
C9 |
C10 |
H11 |
109.1 |
109.5 |
C14 |
C15 |
H18 |
120.0 |
119.9 |
C15 |
C14 |
H19 |
119.2 |
119.9 |
C13 |
C14 |
H19 |
119.2 |
119.9 |
C4 |
C8 |
H3 |
117.9 |
120.1 |
C |
C5 |
C6 |
124.8 |
122.2 |
N2 |
C10 |
H10 |
109.1 |
109.4 |
N2 |
C10 |
H11 |
109.2 |
109.5 |
C10 |
N2 |
H12 |
108.7 |
111.0 |
C5 |
C6 |
C7 |
119.3 |
118.7 |
C5 |
C6 |
H1 |
120.3 |
120.6 |
N |
C7 |
H2 |
117.9 |
119.1 |
C7 |
C6 |
H1 |
120.3 |
120.7 |
C6 |
C7 |
H2 |
117.9 |
119.0 |
H8 |
C9 |
H9 |
109.4 |
109.5 |
H10 |
C10 |
H11 |
109.4 |
109.5 |
H14 |
C11 |
H15 |
109.5 |
109.5 |
C17 |
B1 |
O1 |
|
120.0 |
C17 |
B1 |
O2 |
|
120.0 |
O1 |
B1 |
O2 |
|
120.0 |
B1 |
O1 |
H13 |
|
114.0 |
B1 |
O2 |
H16 |
|
114.0 |
Torsion Angles for AO8
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C1 |
C2 |
C3 |
H4 |
180.3 |
179.8 |
C3 |
C4 |
C8 |
H3 |
0.9 |
0.1 |
C16 |
C17 |
C12 |
C13 |
0.1 |
0.3 |
C17 |
C16 |
C15 |
C14 |
0.1 |
0.0 |
C15 |
C16 |
C17 |
H17 |
180.0 |
180.0 |
C17 |
C16 |
C15 |
H18 |
180.1 |
180.0 |
C16 |
C17 |
B1 |
O1 |
|
359.9 |
C16 |
C17 |
B1 |
O2 |
|
180.0 |
C11 |
C12 |
C17 |
C13 |
179.9 |
179.7 |
C17 |
C12 |
C11 |
H14 |
248.8 |
320.3 |
C17 |
C12 |
C11 |
H15 |
7.7 |
200.3 |
C17 |
C12 |
C13 |
C14 |
360.0 |
359.4 |
C17 |
C12 |
C13 |
H20 |
180.0 |
179.7 |
C17 |
C16 |
C15 |
H17 |
180.0 |
180.0 |
C15 |
C16 |
C17 |
B1 |
|
180.0 |
C14 |
C15 |
C16 |
H18 |
180.0 |
180.0 |
C16 |
C15 |
C14 |
H19 |
180.0 |
179.9 |
C17 |
C12 |
C11 |
C13 |
180.1 |
180.3 |
C12 |
C11 |
N2 |
H12 |
317.1 |
304.0 |
C11 |
C12 |
C13 |
C14 |
180.1 |
179.7 |
C11 |
C12 |
C13 |
H20 |
0.0 |
360.0 |
H14 |
C11 |
C12 |
H15 |
241.1 |
120.0 |
C11 |
N2 |
C10 |
H10 |
162.8 |
60.0 |
C11 |
N2 |
C10 |
H11 |
43.2 |
300.0 |
C10 |
N2 |
C11 |
H12 |
239.5 |
236.0 |
C13 |
C12 |
C11 |
H14 |
68.7 |
140.0 |
C13 |
C12 |
C11 |
H15 |
187.6 |
20.0 |
C12 |
C13 |
C14 |
H19 |
179.9 |
180.3 |
C10 |
C9 |
N1 |
H7 |
26.9 |
343.9 |
N2 |
C10 |
C9 |
H10 |
239.8 |
240.1 |
N2 |
C10 |
C9 |
H11 |
120.2 |
120.0 |
C9 |
C10 |
N2 |
H12 |
162.6 |
56.0 |
H8 |
C9 |
C10 |
H9 |
119.1 |
120.0 |
H10 |
C10 |
C9 |
H11 |
240.4 |
240.0 |
C14 |
C15 |
C16 |
H17 |
180.1 |
180.0 |
C16 |
C15 |
C14 |
H18 |
180.0 |
180.0 |
C12 |
C13 |
C14 |
C15 |
359.9 |
0.6 |
C13 |
C14 |
C15 |
H19 |
180.0 |
179.8 |
C12 |
C13 |
C14 |
H20 |
180.0 |
180.3 |
C13 |
C14 |
C15 |
H18 |
180.0 |
179.7 |
C15 |
C14 |
C13 |
H19 |
180.0 |
180.2 |
C4 |
C5 |
C6 |
H1 |
180.7 |
180.0 |
C |
C5 |
C6 |
C7 |
181.3 |
180.0 |
C |
C5 |
C6 |
H1 |
1.3 |
360.0 |
C11 |
N2 |
C10 |
H12 |
120.5 |
124.0 |
N2 |
C10 |
C9 |
H8 |
186.1 |
60.1 |
N2 |
C10 |
C9 |
H9 |
67.1 |
300.1 |
C9 |
C10 |
N2 |
H10 |
120.2 |
119.9 |
C9 |
C10 |
N2 |
H11 |
239.8 |
240.0 |
H10 |
C10 |
N2 |
H11 |
119.6 |
120.0 |
C8 |
N |
C7 |
H2 |
179.0 |
180.0 |
C7 |
C6 |
C5 |
H1 |
180.0 |
180.0 |
C5 |
C6 |
C7 |
H2 |
180.6 |
180.0 |
N |
C7 |
C6 |
H1 |
180.6 |
180.0 |
C6 |
C7 |
N |
H2 |
180.0 |
180.0 |
C5 |
C6 |
C7 |
H1 |
180.0 |
180.0 |
N |
C7 |
C6 |
H2 |
180.0 |
180.0 |
C5 |
C6 |
H1 |
C7 |
180.0 |
180.0 |
H1 |
C6 |
C7 |
H2 |
0.6 |
360.0 |
H2 |
C7 |
C6 |
H1 |
0.6 |
360.0 |
H5 |
C2 |
C3 |
H4 |
0.3 |
360.0 |
H5 |
C2 |
C1 |
H6 |
359.4 |
359.8 |
H6 |
C1 |
C2 |
H5 |
359.4 |
359.8 |
H8 |
C9 |
N1 |
H7 |
147.4 |
103.8 |
H8 |
C9 |
C10 |
N2 |
186.1 |
60.1 |
C10 |
C9 |
H8 |
H9 |
241.4 |
240.0 |
H8 |
C9 |
C10 |
H10 |
306.4 |
180.0 |
H8 |
C9 |
C10 |
H11 |
65.9 |
300.0 |
H9 |
C9 |
N1 |
H7 |
266.5 |
223.8 |
H9 |
C9 |
C10 |
N2 |
67.1 |
300.1 |
C10 |
C9 |
H9 |
H8 |
118.6 |
120.0 |
H9 |
C9 |
C10 |
H10 |
187.3 |
60.0 |
H9 |
C9 |
C10 |
H11 |
306.8 |
180.0 |
C9 |
C10 |
H10 |
N2 |
238.8 |
240.0 |
H10 |
C10 |
C9 |
H8 |
306.4 |
180.0 |
H10 |
C10 |
C9 |
H9 |
187.3 |
60.0 |
C9 |
C10 |
H10 |
H11 |
119.4 |
120.0 |
N2 |
C10 |
H10 |
H11 |
240.6 |
240.0 |
H10 |
C10 |
N2 |
H12 |
42.4 |
296.0 |
C9 |
C10 |
H11 |
N2 |
121.2 |
120.0 |
H11 |
C10 |
C9 |
H8 |
65.9 |
300.0 |
H11 |
C10 |
C9 |
H9 |
306.8 |
180.0 |
C9 |
C10 |
H11 |
H10 |
240.6 |
240.0 |
N2 |
C10 |
H11 |
H10 |
119.4 |
120.0 |
H11 |
C10 |
N2 |
H12 |
282.8 |
176.0 |
H12 |
N2 |
C10 |
H10 |
42.4 |
296.0 |
H12 |
N2 |
C10 |
H11 |
282.8 |
176.0 |
H14 |
C11 |
C12 |
C13 |
68.7 |
140.0 |
C12 |
C11 |
H14 |
H15 |
118.3 |
240.0 |
H14 |
C11 |
N2 |
H12 |
196.5 |
64.0 |
H15 |
C11 |
C12 |
C13 |
187.6 |
20.0 |
C12 |
C11 |
H15 |
H14 |
241.7 |
120.0 |
H15 |
C11 |
N2 |
H12 |
77.6 |
184.0 |
C17 |
C16 |
H17 |
C15 |
180.0 |
180.0 |
H17 |
C16 |
C17 |
B1 |
|
0.1 |
H17 |
C16 |
C15 |
C14 |
180.1 |
180.0 |
H17 |
C16 |
C15 |
H18 |
0.1 |
0.0 |
C16 |
C15 |
H18 |
C14 |
180.0 |
180.0 |
H18 |
C15 |
C16 |
H17 |
0.1 |
0.0 |
H18 |
C15 |
C14 |
H19 |
0.0 |
359.9 |
H19 |
C14 |
C15 |
H18 |
0.0 |
359.9 |
C12 |
C13 |
H20 |
C14 |
180.0 |
179.7 |
H20 |
C13 |
C14 |
H19 |
360.0 |
0.1 |
B1 |
C17 |
C16 |
C15 |
|
180.0 |
B1 |
C17 |
C16 |
H17 |
|
0.1 |
B1 |
C17 |
C12 |
C13 |
|
180.2 |
O1 |
B1 |
C17 |
O2 |
|
179.9 |
C17 |
B1 |
O1 |
H13 |
|
180.0 |
C17 |
B1 |
O2 |
H16 |
|
180.0 |
C17 |
B1 |
O1 |
O2 |
|
180.1 |
O1 |
B1 |
O2 |
H16 |
|
0.0 |
C17 |
B1 |
O2 |
O1 |
|
179.9 |
O2 |
B1 |
O1 |
H13 |
|
359.9 |
H13 |
O1 |
B1 |
O2 |
|
359.9 |