PDB Chemical Component AN2

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for AN2

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
N3B PB 1.662 1.683
N3B H3B1 1.000 1.008
N3B H3B2 1.000 1.009
PB O2B 1.597 1.610
PB O1B 1.481 1.480
PB O3A 1.681 1.610
O2B HO2B 0.950 0.967
O3A PA 1.675 1.610
PA O1A 1.475 1.480
PA O2A 1.508 1.611
PA O5' 1.606 1.610
O2A HO2A 0.950 0.966
O5' C5' 1.480 1.429
C5' C4' 1.570 1.530
C5' H5'1 1.100 1.090
C5' H5'2 1.099 1.091
C4' O4' 1.474 1.445
C4' C3' 1.528 1.545
C4' H4' 1.100 1.090
O4' C1' 1.482 1.444
C3' O3' 1.449 1.429
C3' C2' 1.560 1.546
C3' H3' 1.100 1.090
O3' HA 0.950 0.967
C2' O2' 1.458 1.429
C2' C1' 1.569 1.544
C2' H2' 1.100 1.090
O2' HB 0.950 0.967
C1' N9 1.573 1.465
C1' H1' 1.100 1.090
N9 C8 1.342 1.363
N9 C4 1.367 1.372
C8 N7 1.351 1.301
C8 H8 1.080 1.080
N7 C5 1.328 1.355
C5 C4 1.392 1.405
C5 C6 1.397 1.405
C4 N3 1.358 1.329
N3 C2 1.333 1.316
C2 N1 1.379 1.320
C2 H2 1.080 1.080
N1 C6 1.404 1.329
C6 N6 1.322 1.384
N6 H6N1 1.000 0.971
N6 H6N2 1.000 0.970

Bond Angles for AN2

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
PB N3B H3B1 109.4 106.7
PB N3B H3B2 109.5 106.7
N3B PB O2B 104.0 109.4
N3B PB O1B 112.0 109.5
N3B PB O3A 101.8 109.5
H3B1 N3B H3B2 109.4 106.7
O2B PB O1B 110.1 109.5
O2B PB O3A 106.6 109.5
PB O2B HO2B 109.5 106.8
O1B PB O3A 120.8 109.5
PB O3A PA 136.1 106.8
O3A PA O1A 109.0 109.5
O3A PA O2A 115.6 109.5
O3A PA O5' 89.5 109.5
O1A PA O2A 117.5 109.5
O1A PA O5' 106.0 109.5
O2A PA O5' 115.7 109.5
PA O2A HO2A 109.5 106.8
PA O5' C5' 118.6 106.8
O5' C5' C4' 111.6 109.5
O5' C5' H5'1 108.3 109.5
O5' C5' H5'2 108.8 109.5
C4' C5' H5'1 108.3 109.5
C4' C5' H5'2 108.8 109.4
C5' C4' O4' 100.9 110.3
C5' C4' C3' 120.1 110.5
C5' C4' H4' 107.1 110.3
H5'1 C5' H5'2 111.1 109.4
O4' C4' C3' 104.6 104.8
O4' C4' H4' 121.9 110.4
C4' O4' C1' 112.3 105.2
C3' C4' H4' 103.5 110.4
C4' C3' O3' 112.9 110.5
C4' C3' C2' 101.9 104.1
C4' C3' H3' 113.3 110.5
O4' C1' C2' 102.6 104.9
O4' C1' N9 115.6 110.4
O4' C1' H1' 109.9 110.4
O3' C3' C2' 112.3 110.6
O3' C3' H3' 103.0 110.5
C3' O3' HA 109.5 106.8
C2' C3' H3' 113.8 110.6
C3' C2' O2' 113.9 110.5
C3' C2' C1' 103.5 104.0
C3' C2' H2' 111.8 110.5
O2' C2' C1' 112.8 110.8
O2' C2' H2' 102.3 110.4
C2' O2' HB 109.5 106.9
C1' C2' H2' 112.9 110.4
C2' C1' N9 108.8 110.4
C2' C1' H1' 116.6 110.4
N9 C1' H1' 103.8 110.3
C1' N9 C8 123.5 126.3
C1' N9 C4 129.5 126.3
C8 N9 C4 107.0 107.4
N9 C8 N7 108.8 110.0
N9 C8 H8 125.6 125.0
N9 C4 C5 108.1 106.0
N9 C4 N3 134.3 134.9
N7 C8 H8 125.6 125.0
C8 N7 C5 109.9 109.4
N7 C5 C4 106.2 107.2
N7 C5 C6 133.0 134.7
C4 C5 C6 120.7 118.2
C5 C4 N3 117.6 119.1
C5 C6 N1 119.0 118.5
C5 C6 N6 120.8 120.8
C4 N3 C2 123.2 120.6
N3 C2 N1 121.1 122.5
N3 C2 H2 119.5 118.8
N1 C2 H2 119.4 118.7
C2 N1 C6 118.3 121.2
N1 C6 N6 120.1 120.7
C6 N6 H6N1 109.5 120.0
C6 N6 H6N2 109.5 120.0
H6N1 N6 H6N2 109.5 120.0

Torsion Angles for AN2

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
H3B1 N3B PB H3B2 120.0 246.2
O2B PB N3B O1B 241.1 240.0
O2B PB N3B O3A 110.6 120.0
N3B PB O2B HO2B 16.5 300.0
O1B PB N3B O3A 229.5 240.0
N3B PB O3A PA 183.7 180.0
PB N3B H3B1 H3B2 240.0 113.8
H3B1 N3B PB O2B 290.8 300.0
H3B1 N3B PB O1B 49.7 60.0
H3B1 N3B PB O3A 180.2 180.0
PB N3B H3B2 H3B1 120.0 246.2
H3B2 N3B PB O2B 170.9 53.8
H3B2 N3B PB O1B 289.8 173.8
H3B2 N3B PB O3A 60.2 293.8
O2B PB N3B H3B1 290.8 300.0
O2B PB N3B H3B2 170.9 53.8
N3B PB O2B O1B 120.2 120.0
N3B PB O2B O3A 252.9 240.0
O1B PB O2B O3A 132.7 120.0
O2B PB O3A PA 75.0 60.0
O1B PB N3B H3B1 49.7 60.0
O1B PB N3B H3B2 289.8 173.8
N3B PB O1B O2B 244.8 240.0
N3B PB O1B O3A 119.9 120.0
O2B PB O1B O3A 235.1 240.0
O1B PB O2B HO2B 256.3 180.0
O1B PB O3A PA 308.5 300.0
O3A PB N3B H3B1 180.2 180.0
O3A PB N3B H3B2 60.2 293.8
N3B PB O3A O2B 108.7 120.0
N3B PB O3A O1B 235.2 240.0
O2B PB O3A O1B 126.5 120.0
O3A PB O2B HO2B 123.6 59.9
PB O3A PA O1A 251.4 320.0
PB O3A PA O2A 26.3 80.0
PB O3A PA O5' 144.7 200.0
HO2B O2B PB O1B 256.3 180.0
HO2B O2B PB O3A 123.6 59.9
O1A PA O3A O2A 225.2 240.0
O1A PA O3A O5' 106.7 120.0
O2A PA O3A O5' 241.6 240.0
O3A PA O2A HO2A 164.2 60.0
O3A PA O5' C5' 307.9 175.1
O3A PA O1A O2A 133.9 120.0
O3A PA O1A O5' 264.9 240.0
O2A PA O1A O5' 131.1 120.0
O1A PA O2A HO2A 295.1 180.0
O1A PA O5' C5' 198.3 55.0
O3A PA O2A O1A 229.1 240.0
O3A PA O2A O5' 102.7 120.0
O1A PA O2A O5' 233.6 240.0
O2A PA O5' C5' 66.2 295.0
O3A PA O5' O1A 109.6 120.0
O3A PA O5' O2A 241.7 240.0
O1A PA O5' O2A 132.1 120.0
O5' PA O2A HO2A 61.6 300.0
PA O5' C5' C4' 224.0 180.0
PA O5' C5' H5'1 104.9 60.0
PA O5' C5' H5'2 344.0 300.0
HO2A O2A PA O5' 61.6 300.0
C4' C5' O5' H5'1 119.1 120.0
C4' C5' O5' H5'2 240.0 240.1
O5' C5' C4' O4' 292.1 66.4
O5' C5' C4' C3' 46.2 181.8
O5' C5' C4' H4' 163.6 304.2
H5'1 C5' O5' H5'2 120.9 120.0
O5' C5' C4' H5'1 240.9 239.9
O5' C5' C4' H5'2 120.0 120.0
H5'1 C5' C4' H5'2 239.1 240.1
O4' C4' C5' C3' 245.9 244.6
O4' C4' C5' H4' 128.5 122.3
C5' C4' O4' C1' 141.4 159.5
C3' C4' C5' H4' 242.6 237.6
C5' C4' C3' O3' 93.6 98.4
C5' C4' C3' C2' 214.3 217.1
C5' C4' C3' H3' 337.0 335.8
O5' C5' H5'1 C4' 121.1 120.0
O5' C5' H5'1 H5'2 240.6 240.0
C4' C5' H5'1 H5'2 119.4 119.9
H5'1 C5' C4' O4' 51.2 186.5
H5'1 C5' C4' C3' 165.3 301.9
H5'1 C5' C4' H4' 282.7 64.3
O5' C5' H5'2 C4' 238.3 240.0
O5' C5' H5'2 H5'1 119.1 120.1
C4' C5' H5'2 H5'1 240.8 240.0
H5'2 C5' C4' O4' 172.1 306.5
H5'2 C5' C4' C3' 286.2 61.8
H5'2 C5' C4' H4' 43.6 184.2
O4' C4' C5' H5'1 51.2 186.5
O4' C4' C5' H5'2 172.1 306.5
C5' C4' O4' C3' 125.3 118.9
C5' C4' O4' H4' 241.8 237.8
C3' C4' O4' H4' 116.5 118.9
O4' C4' C3' O3' 205.8 217.2
O4' C4' C3' C2' 326.5 335.9
O4' C4' C3' H3' 89.2 94.7
C4' O4' C1' C2' 8.5 319.5
C4' O4' C1' N9 250.3 200.6
C4' O4' C1' H1' 133.2 78.4
C3' C4' C5' H5'1 165.3 301.9
C3' C4' C5' H5'2 286.2 61.8
C5' C4' C3' O4' 247.8 241.2
C5' C4' C3' H4' 119.2 122.3
O4' C4' C3' H4' 231.4 241.1
C3' C4' O4' C1' 16.1 40.6
O3' C3' C4' C2' 239.3 241.3
O3' C3' C4' H3' 116.6 122.5
C4' C3' O3' HA 156.3 180.0
C2' C3' C4' H3' 237.3 241.2
C4' C3' C2' O2' 275.9 241.2
C4' C3' C2' C1' 38.8 0.2
C4' C3' C2' H2' 160.6 118.7
H4' C4' C5' H5'1 282.7 64.3
H4' C4' C5' H5'2 43.6 184.2
C5' C4' H4' O4' 115.1 122.2
C5' C4' H4' C3' 232.2 237.6
O4' C4' H4' C3' 117.1 115.4
H4' C4' O4' C1' 259.5 281.7
H4' C4' C3' O3' 334.4 336.1
H4' C4' C3' C2' 95.1 94.8
H4' C4' C3' H3' 217.8 213.5
C1' O4' C4' C3' 16.1 40.6
C1' O4' C4' H4' 259.5 281.7
C3' C2' C1' O4' 330.8 23.9
O2' C2' C1' O4' 94.4 142.6
O4' C1' C2' H2' 209.8 265.3
C2' C1' O4' N9 118.2 118.9
C2' C1' O4' H1' 235.4 241.1
N9 C1' O4' H1' 117.1 122.2
O4' C1' N9 C8 22.9 22.0
O4' C1' N9 C4 199.3 202.0
O3' C3' C4' H4' 334.4 336.1
C4' C3' O3' C2' 114.5 114.7
C4' C3' O3' H3' 237.4 237.4
C2' C3' O3' H3' 122.9 122.8
O3' C3' C2' O2' 37.0 359.8
O3' C3' C2' C1' 159.9 118.8
O3' C3' C2' H2' 281.7 237.3
C2' C3' C4' H4' 95.1 94.8
C4' C3' C2' O3' 238.9 241.4
C4' C3' C2' H3' 122.3 118.7
O4' C1' C2' C3' 330.8 23.9
O3' C3' C2' H3' 243.4 237.3
C2' C3' O3' HA 41.8 65.4
O2' C2' C3' C1' 237.1 241.0
O2' C2' C3' H2' 115.3 122.5
C3' C2' O2' HB 252.3 298.6
C1' C2' C3' H2' 238.2 241.5
C3' C2' C1' N9 93.8 142.7
C3' C2' C1' H1' 210.7 265.0
H3' C3' C4' H4' 217.8 213.5
C4' C3' H3' O3' 122.3 122.6
C4' C3' H3' C2' 244.2 245.3
O3' C3' H3' C2' 121.9 122.7
H3' C3' O3' HA 278.9 302.6
H3' C3' C2' O2' 153.6 122.5
H3' C3' C2' C1' 276.5 241.5
H3' C3' C2' H2' 38.3 360.0
HA O3' C3' C2' 41.8 65.4
HA O3' C3' H3' 278.9 302.6
O4' C1' C2' O2' 94.4 142.6
O2' C2' C3' H3' 153.6 122.5
C3' C2' O2' C1' 117.6 114.8
C3' C2' O2' H2' 239.2 237.4
C1' C2' O2' H2' 121.6 122.7
O2' C2' C1' N9 217.3 261.5
O2' C2' C1' H1' 334.3 23.7
O4' C1' C2' N9 237.1 241.1
O4' C1' C2' H1' 120.1 118.9
C1' C2' C3' H3' 276.5 241.5
C3' C2' C1' O2' 236.4 241.2
C3' C2' C1' H2' 121.1 118.6
O2' C2' C1' H2' 244.6 237.3
C1' C2' O2' HB 134.7 183.9
N9 C1' C2' H1' 243.1 237.8
C2' C1' N9 C8 268.2 266.5
C2' C1' N9 C4 84.6 86.5
H2' C2' C3' H3' 38.3 360.0
C3' C2' H2' O2' 122.3 122.6
C3' C2' H2' C1' 243.8 245.5
O2' C2' H2' C1' 121.5 122.9
H2' C2' O2' HB 13.1 61.2
H2' C2' C1' N9 332.7 24.2
H2' C2' C1' H1' 89.6 146.4
HB O2' C2' C1' 134.7 183.9
HB O2' C2' H2' 13.1 61.2
O4' C1' N9 C2' 114.7 115.5
O4' C1' N9 H1' 239.5 237.7
N9 C1' C2' H2' 332.7 24.2
C2' C1' N9 H1' 124.8 122.2
C8 N9 C1' C4 183.6 180.0
C1' N9 C8 N7 177.4 180.0
C1' N9 C8 H8 357.4 0.0
C1' N9 C4 C5 183.4 180.2
C1' N9 C4 N3 1.4 0.0
O4' C1' H1' C2' 243.9 244.5
O4' C1' H1' N9 124.2 122.3
H1' C1' C2' H2' 89.6 146.4
C2' C1' H1' N9 240.3 237.8
H1' C1' N9 C8 143.4 144.3
H1' C1' N9 C4 319.8 324.3
C8 N9 C1' H1' 143.4 144.3
C1' N9 C8 C4 177.1 180.0
C8 N9 C4 C5 0.3 0.2
C8 N9 C4 N3 178.3 180.1
N7 C8 N9 H8 180.0 180.0
N9 C8 N7 C5 359.2 359.8
C4 N9 C1' H1' 319.8 324.3
C1' N9 C4 C8 183.1 180.0
C4 N9 C8 N7 0.2 0.0
C4 N9 C8 H8 180.3 180.0
N7 C5 C4 N9 359.2 359.6
N9 C4 C5 C6 179.4 180.3
C5 C4 N9 N3 182.1 180.2
N9 C4 N3 C2 181.0 180.0
N7 C8 N9 C4 0.2 0.0
N9 C8 N7 H8 180.0 180.0
C8 N7 C5 C4 0.9 0.4
C8 N7 C5 C6 180.7 179.5
H8 C8 N9 C4 180.3 180.0
N9 C8 H8 N7 180.0 180.0
H8 C8 N7 C5 179.2 179.8
N9 C4 C5 N7 359.2 359.6
C5 N7 C8 H8 179.2 179.8
C4 C5 N7 C6 180.2 180.9
N7 C5 C4 N3 180.9 179.8
N7 C5 C6 N1 180.5 180.5
N7 C5 C6 N6 359.6 0.7
N9 C4 C5 N3 178.3 179.9
N7 C5 C4 C6 179.8 179.3
C4 C5 C6 N1 0.2 359.5
C4 C5 C6 N6 179.3 179.7
C5 C4 N3 C2 358.8 359.8
N7 C5 C6 C4 180.3 181.0
C6 C5 C4 N3 1.1 0.5
C2 N1 C6 C5 358.6 0.3
N1 C6 C5 N6 180.9 179.8
C5 C6 N6 H6N1 74.4 179.8
C5 C6 N6 H6N2 314.3 359.4
N9 C4 N3 C5 182.2 180.2
N3 C4 C5 C6 1.1 0.5
C4 N3 C2 N1 0.0 0.0
C4 N3 C2 H2 180.0 180.0
N1 C2 N3 H2 180.0 180.0
N3 C2 N1 C6 1.3 360.0
C5 C6 N1 C2 358.6 0.3
N3 C2 N1 H2 180.0 180.0
C2 N1 C6 N6 179.5 180.0
N3 C2 H2 N1 180.0 180.0
H2 C2 N1 C6 181.3 180.0
C5 C6 N1 N6 179.1 180.2
C6 N1 C2 H2 181.3 180.0
N1 C6 N6 H6N1 253.5 0.0
N1 C6 N6 H6N2 133.4 179.7
C5 C6 N6 N1 180.9 179.7
H6N1 N6 C6 H6N2 120.1 180.4
C6 N6 H6N1 H6N2 240.0 179.6
C6 N6 H6N2 H6N1 120.0 180.4