PDB Chemical Component AMV

Ideal Model

Chemical Description

Name methyl 2-acetamido-3-O-[(1R)-1-carboxyethyl]-2-deoxy-beta-D-glucopyranoside
Synonyms METHYL 2-(ACETYLAMINO)-3-O-[(1R)-1-CARBOXYETHYL]-2-DEOXY-BETA-D-GLUCOPYRANOSIDE; methyl 2-acetamido-3-O-[(1R)-1-carboxyethyl]-2-deoxy-beta-D-glucoside; methyl 2-acetamido-3-O-[(1R)-1-carboxyethyl]-2-deoxy-D-glucoside; methyl 2-acetamido-3-O-[(1R)-1-carboxyethyl]-2-deoxy-glucoside
Formula C12 H21 N O8
Formal charge 0
Molecular weight 307.297 g/mol
Component type D-saccharide
Nonstandard Parent Id NAG

Chemical features

Atom count 42
Chiral atom count 6
Chiral atoms C1 C2 C3 C4 C5 C9
Observed leaving atoms HO4 HO6
Bond count 42
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) methyl 2-(acetylamino)-3-O-[(1R)-1-carboxyethyl]-2-deoxy-beta-D-glucopyranoside
Systematic name (OpenEye OEToolkits) (2R)-2-[(2R,3S,4R,5R,6R)-5-acetamido-3-hydroxy-2-(hydroxymethyl)-6-methoxy-oxan-4-yl]oxypropanoic acid

Chemical Descriptors

Stereo SMILES (CACTVS) CO[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O[C@H](C)C(O)=O)[C@H]1NC(C)=O
SMILES (CACTVS) CO[CH]1O[CH](CO)[CH](O)[CH](O[CH](C)C(O)=O)[CH]1NC(C)=O
Stereo SMILES (OpenEye) C[C@H](C(=O)O)O[C@@H]1[C@H]([C@@H](O[C@@H]([C@H]1O)CO)OC)NC(=O)C
InChI descriptor InChI=1S/C12H21NO8/c1-5(11(17)18)20-10-8(13-6(2)15)12(19-3)21-7(4-14)9(10)16/h5,7-10,12,14,16H,4H2,1-3H3,(H,13,15)(H,17,18)/t5-,7-,8-,9-,10-,12-/m1/s1
InChIKey descriptor UXEQYDNCHCKBIL-PKKPQKKZSA-N

Status Information

Last modified 2020-07-17
Created 2006-10-25
Release status REL
Processing site RCSB