PDB Chemical Component AML

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for AML

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.528 1.529
C1 HC11 1.115 1.089
C1 HC12 1.114 1.091
C1 HC13 1.116 1.089
C2 C3 1.521 1.530
C2 HC21 1.114 1.089
C2 HC22 1.115 1.090
C3 C4 1.518 1.528
C3 HC31 1.114 1.089
C3 HC32 1.116 1.090
C4 C5 1.516 1.529
C4 HC41 1.115 1.089
C4 HC42 1.115 1.091
C5 N1 1.479 1.469
C5 HC51 1.114 1.090
C5 HC52 1.115 1.090
N1 HN11 1.021 1.008
N1 HN12 1.019 1.008

Bond Angles for AML

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 HC11 114.0 109.6
C2 C1 HC12 110.5 109.4
C2 C1 HC13 110.5 109.5
C1 C2 C3 114.1 109.5
C1 C2 HC21 110.5 109.5
C1 C2 HC22 110.5 109.4
HC11 C1 HC12 110.6 109.4
HC11 C1 HC13 110.5 109.5
HC12 C1 HC13 99.7 109.4
C3 C2 HC21 110.5 109.6
C3 C2 HC22 110.5 109.4
C2 C3 C4 111.2 109.5
C2 C3 HC31 111.6 109.5
C2 C3 HC32 111.6 109.4
HC21 C2 HC22 99.7 109.5
C4 C3 HC31 111.5 109.5
C4 C3 HC32 111.6 109.4
C3 C4 C5 111.7 109.5
C3 C4 HC41 111.4 109.6
C3 C4 HC42 111.4 109.5
HC31 C3 HC32 98.8 109.5
C5 C4 HC41 111.4 109.5
C5 C4 HC42 111.4 109.4
C4 C5 N1 109.9 109.6
C4 C5 HC51 112.1 109.5
C4 C5 HC52 112.0 109.5
HC41 C4 HC42 98.9 109.4
N1 C5 HC51 112.0 109.4
N1 C5 HC52 112.0 109.5
C5 N1 HN11 110.0 106.8
C5 N1 HN12 112.1 106.7
HC51 C5 HC52 98.4 109.4
HN11 N1 HN12 112.0 106.7

Torsion Angles for AML

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
HC11 C1 C2 HC12 234.6 240.1
HC11 C1 C2 HC13 125.2 120.1
HC12 C1 C2 HC13 250.6 240.1
C3 C2 C1 HC21 234.7 239.8
C3 C2 C1 HC22 125.2 119.9
C1 C2 C3 C4 309.2 180.0
C1 C2 C3 HC31 74.4 300.1
C1 C2 C3 HC32 183.9 60.1
HC21 C2 C1 HC22 250.5 240.0
C2 C1 HC11 HC12 125.3 119.9
C2 C1 HC11 HC13 234.8 239.9
HC11 C1 C2 C3 179.9 180.0
HC11 C1 C2 HC21 305.2 300.1
HC11 C1 C2 HC22 54.7 60.1
HC12 C1 HC11 HC13 109.5 119.9
C2 C1 HC12 HC11 232.7 240.0
C2 C1 HC12 HC13 116.3 120.0
HC12 C1 C2 C3 305.3 299.9
HC12 C1 C2 HC21 70.6 60.1
HC12 C1 C2 HC22 180.1 180.0
HC11 C1 HC12 HC13 243.6 240.0
C2 C1 HC13 HC11 127.2 120.2
C2 C1 HC13 HC12 243.7 240.1
HC13 C1 C2 C3 54.7 59.8
HC13 C1 C2 HC21 180.0 180.0
HC13 C1 C2 HC22 289.5 300.0
HC11 C1 HC13 HC12 116.5 119.9
C3 C2 C1 HC11 179.9 180.0
C3 C2 C1 HC12 305.3 299.9
C3 C2 C1 HC13 54.7 59.8
C1 C2 C3 HC21 125.3 120.1
C1 C2 C3 HC22 234.8 240.1
HC21 C2 C3 HC22 109.5 120.0
C4 C3 C2 HC31 234.7 239.9
C4 C3 C2 HC32 125.2 119.9
C2 C3 C4 C5 185.0 180.0
C2 C3 C4 HC41 310.3 300.1
C2 C3 C4 HC42 59.7 60.1
HC31 C3 C2 HC32 250.5 240.0
HC21 C2 C1 HC11 305.2 300.1
HC21 C2 C1 HC12 70.6 60.1
HC21 C2 C1 HC13 180.0 180.0
C1 C2 HC21 C3 232.8 239.9
C1 C2 HC21 HC22 116.4 119.9
C3 C2 HC21 HC22 243.6 240.0
HC21 C2 C3 C4 183.9 59.9
HC21 C2 C3 HC31 309.1 180.0
HC21 C2 C3 HC32 58.6 300.0
HC22 C2 C1 HC11 54.7 60.1
HC22 C2 C1 HC12 180.1 180.0
HC22 C2 C1 HC13 289.5 300.0
C1 C2 HC22 C3 127.2 119.9
C1 C2 HC22 HC21 243.6 240.0
C3 C2 HC22 HC21 116.4 120.1
HC22 C2 C3 C4 74.4 299.9
HC22 C2 C3 HC31 199.7 60.0
HC22 C2 C3 HC32 309.2 180.0
C4 C3 C2 HC21 183.9 59.9
C4 C3 C2 HC22 74.4 299.9
C2 C3 C4 HC31 125.3 120.1
C2 C3 C4 HC32 234.7 240.1
HC31 C3 C4 HC32 109.4 120.0
C5 C4 C3 HC41 234.7 239.9
C5 C4 C3 HC42 125.2 119.9
C3 C4 C5 N1 182.5 180.1
C3 C4 C5 HC51 307.8 300.1
C3 C4 C5 HC52 57.3 60.0
HC41 C4 C3 HC42 250.5 240.0
HC31 C3 C2 HC21 309.1 180.0
HC31 C3 C2 HC22 199.7 60.0
C2 C3 HC31 C4 234.9 239.9
C2 C3 HC31 HC32 117.5 120.0
C4 C3 HC31 HC32 242.6 240.1
HC31 C3 C4 C5 59.7 59.9
HC31 C3 C4 HC41 184.9 180.0
HC31 C3 C4 HC42 294.4 300.0
HC32 C3 C2 HC21 58.6 300.0
HC32 C3 C2 HC22 309.2 180.0
C2 C3 HC32 C4 125.0 119.9
C2 C3 HC32 HC31 242.4 240.0
C4 C3 HC32 HC31 117.4 120.0
HC32 C3 C4 C5 310.3 299.9
HC32 C3 C4 HC41 75.5 60.0
HC32 C3 C4 HC42 185.0 180.0
C5 C4 C3 HC31 59.7 59.9
C5 C4 C3 HC32 310.3 299.9
C3 C4 C5 HC41 125.3 120.2
C3 C4 C5 HC42 234.7 240.0
HC41 C4 C5 HC42 109.4 119.9
N1 C5 C4 HC51 234.7 240.0
N1 C5 C4 HC52 125.3 120.0
C4 C5 N1 HN11 180.0 180.1
C4 C5 N1 HN12 54.7 293.8
HC51 C5 C4 HC52 250.5 240.0
HC41 C4 C3 HC31 184.9 180.0
HC41 C4 C3 HC32 75.5 60.0
C3 C4 HC41 C5 234.6 239.9
C3 C4 HC41 HC42 117.3 120.0
C5 C4 HC41 HC42 242.7 240.1
HC41 C4 C5 N1 57.2 59.9
HC41 C4 C5 HC51 182.5 179.9
HC41 C4 C5 HC52 292.0 299.9
HC42 C4 C3 HC31 294.4 300.0
HC42 C4 C3 HC32 185.0 180.0
C3 C4 HC42 C5 125.4 120.0
C3 C4 HC42 HC41 242.7 239.9
C5 C4 HC42 HC41 117.3 119.9
HC42 C4 C5 N1 307.8 300.0
HC42 C4 C5 HC51 73.0 60.1
HC42 C4 C5 HC52 182.5 180.0
N1 C5 C4 HC41 57.2 59.9
N1 C5 C4 HC42 307.8 300.0
C4 C5 N1 HC51 125.3 120.1
C4 C5 N1 HC52 234.7 240.0
HC51 C5 N1 HC52 109.4 119.9
HN11 N1 C5 HN12 125.3 246.3
HC51 C5 C4 HC41 182.5 179.9
HC51 C5 C4 HC42 73.0 60.1
C4 C5 HC51 N1 235.9 239.9
C4 C5 HC51 HC52 118.0 120.0
N1 C5 HC51 HC52 242.1 240.1
HC51 C5 N1 HN11 54.7 60.0
HC51 C5 N1 HN12 289.4 173.8
HC52 C5 C4 HC41 292.0 299.9
HC52 C5 C4 HC42 182.5 180.0
C4 C5 HC52 N1 124.1 120.1
C4 C5 HC52 HC51 242.0 240.0
N1 C5 HC52 HC51 117.9 119.9
HC52 C5 N1 HN11 305.3 300.1
HC52 C5 N1 HN12 180.0 53.8
HN11 N1 C5 HC51 54.7 60.0
HN11 N1 C5 HC52 305.3 300.1
C5 N1 HN11 HN12 234.6 113.7
HN12 N1 C5 HC51 289.4 173.8
HN12 N1 C5 HC52 180.0 53.8
C5 N1 HN12 HN11 124.2 246.2