PDB Chemical Component AMH

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for AMH

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.526 1.530
C1 C6 1.519 1.529
C1 C8 1.529 1.507
C1 H1 1.115 1.089
C2 C3 1.458 1.529
C2 H21 1.115 1.089
C2 H22 1.115 1.090
C3 C4 1.475 1.529
C3 H31 1.115 1.090
C3 H32 1.115 1.089
C4 C5 1.580 1.529
C4 C7 1.653 1.530
C4 H4 1.115 1.090
C5 C6 1.542 1.529
C5 H51 1.115 1.089
C5 H52 1.115 1.089
C6 H61 1.115 1.090
C6 H62 1.115 1.090
C7 N 1.454 1.468
C7 H71 1.114 1.089
C7 H72 1.115 1.089
C8 O1 1.241 1.208
C8 O2 1.279 1.342
N HN1 1.020 1.010
N HN2 1.020 1.009
O2 HO2 0.949 0.967

Bond Angles for AMH

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 C6 114.3 109.5
C2 C1 C8 110.0 109.5
C2 C1 H1 109.1 109.4
C1 C2 C3 108.6 109.5
C1 C2 H21 112.5 109.5
C1 C2 H22 112.5 109.5
C6 C1 C8 117.4 109.5
C6 C1 H1 99.7 109.5
C1 C6 C5 106.1 109.5
C1 C6 H61 113.5 109.4
C1 C6 H62 113.5 109.5
C8 C1 H1 105.1 109.5
C1 C8 O1 129.9 120.0
C1 C8 O2 119.7 120.0
C3 C2 H21 112.6 109.5
C3 C2 H22 112.5 109.5
C2 C3 C4 111.3 109.5
C2 C3 H31 111.6 109.5
C2 C3 H32 111.5 109.5
H21 C2 H22 97.9 109.4
C4 C3 H31 111.5 109.5
C4 C3 H32 111.5 109.4
C3 C4 C5 112.9 109.5
C3 C4 C7 106.6 109.5
C3 C4 H4 108.8 109.5
H31 C3 H32 98.9 109.5
C5 C4 C7 108.3 109.5
C5 C4 H4 107.0 109.4
C4 C5 C6 108.8 109.5
C4 C5 H51 112.5 109.4
C4 C5 H52 112.5 109.5
C7 C4 H4 113.4 109.4
C4 C7 N 95.7 109.5
C4 C7 H71 117.6 109.5
C4 C7 H72 117.6 109.4
C6 C5 H51 112.4 109.4
C6 C5 H52 112.4 109.5
C5 C6 H61 113.4 109.4
C5 C6 H62 113.5 109.5
H51 C5 H52 97.9 109.5
H61 C6 H62 96.9 109.4
N C7 H71 117.6 109.5
N C7 H72 117.5 109.5
C7 N HN1 95.7 106.7
C7 N HN2 117.6 106.7
H71 C7 H72 92.7 109.4
O1 C8 O2 110.3 120.0
C8 O2 HO2 119.7 120.0
HN1 N HN2 117.6 106.7

Torsion Angles for AMH

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C6 C1 C2 C8 134.6 240.0
C6 C1 C2 H1 249.4 120.0
C2 C1 C6 C5 60.2 300.0
C2 C1 C6 H61 185.4 60.0
C2 C1 C6 H62 294.8 180.0
C8 C1 C2 H1 114.8 240.0
C2 C1 C8 O1 61.6 360.0
C2 C1 C8 O2 242.0 180.0
C3 C2 C1 H21 234.7 120.0
C3 C2 C1 H22 125.3 240.0
C1 C2 C3 C4 57.0 300.0
C1 C2 C3 H31 182.2 180.0
C1 C2 C3 H32 291.8 60.0
H21 C2 C1 H22 250.5 119.9
C2 C1 C6 C8 228.9 120.0
C2 C1 C6 H1 116.2 240.0
C6 C1 C2 C3 298.8 60.0
C6 C1 C2 H21 64.0 300.0
C6 C1 C2 H22 173.5 180.0
C8 C1 C6 H1 247.2 120.0
C6 C1 C8 O1 288.6 120.0
C6 C1 C8 O2 109.0 300.0
C4 C5 C6 C1 305.3 59.9
C1 C6 C5 H51 180.0 300.0
C1 C6 C5 H52 70.6 180.0
C5 C6 C1 H61 234.8 240.0
C5 C6 C1 H62 125.3 120.1
H61 C6 C1 H62 250.5 240.0
C2 C1 C8 C6 133.0 240.0
C2 C1 C8 H1 242.7 120.0
C8 C1 C2 C3 164.2 180.0
C8 C1 C2 H21 289.4 60.0
C8 C1 C2 H22 38.9 300.1
C6 C1 C8 H1 109.7 240.0
C8 C1 C6 C5 191.2 180.0
C8 C1 C6 H61 316.5 300.0
C8 C1 C6 H62 65.9 60.0
O1 C8 C1 O2 179.6 180.0
C1 C8 O2 HO2 180.1 180.0
C2 C1 H1 C6 240.0 120.0
C2 C1 H1 C8 117.9 240.0
H1 C1 C2 C3 49.4 300.0
H1 C1 C2 H21 174.6 180.0
H1 C1 C2 H22 284.1 60.0
C6 C1 H1 C8 238.0 120.0
H1 C1 C6 C5 304.0 60.0
H1 C1 C6 H61 69.2 180.0
H1 C1 C6 H62 178.7 299.9
H1 C1 C8 O1 178.9 240.0
H1 C1 C8 O2 359.3 60.1
C3 C2 C1 C6 298.8 60.0
C3 C2 C1 C8 164.2 180.0
C3 C2 C1 H1 49.4 300.0
C1 C2 C3 H21 125.2 240.0
C1 C2 C3 H22 234.7 120.0
H21 C2 C3 H22 109.5 240.1
C4 C3 C2 H31 234.7 120.0
C4 C3 C2 H32 125.2 240.1
C2 C3 C4 C5 302.5 59.9
C2 C3 C4 C7 183.7 180.0
C2 C3 C4 H4 61.2 300.0
H31 C3 C2 H32 250.5 120.0
H21 C2 C1 C6 64.0 300.0
H21 C2 C1 C8 289.4 60.0
H21 C2 C1 H1 174.6 180.0
C1 C2 H21 C3 236.9 120.0
C1 C2 H21 H22 118.4 240.0
C3 C2 H21 H22 241.5 120.0
H21 C2 C3 C4 291.8 60.1
H21 C2 C3 H31 57.0 300.0
H21 C2 C3 H32 166.5 180.0
H22 C2 C1 C6 173.5 180.0
H22 C2 C1 C8 38.9 300.1
H22 C2 C1 H1 284.1 60.0
C1 C2 H22 C3 123.1 240.0
C1 C2 H22 H21 241.6 120.0
C3 C2 H22 H21 118.5 240.0
H22 C2 C3 C4 182.2 180.0
H22 C2 C3 H31 307.5 60.0
H22 C2 C3 H32 57.0 299.9
C4 C3 C2 H21 291.8 60.1
C4 C3 C2 H22 182.2 180.0
C2 C3 C4 H31 125.3 240.0
C2 C3 C4 H32 234.8 120.0
H31 C3 C4 H32 109.5 240.0
C5 C4 C3 C7 118.8 239.9
C5 C4 C3 H4 241.3 119.9
C3 C4 C5 C6 56.4 300.1
C3 C4 C5 H51 181.7 60.0
C3 C4 C5 H52 291.2 180.0
C7 C4 C3 H4 122.6 240.0
C3 C4 C7 N 187.1 180.0
C3 C4 C7 H71 312.4 59.9
C3 C4 C7 H72 61.9 299.9
H31 C3 C2 H21 57.0 300.0
H31 C3 C2 H22 307.5 60.0
C2 C3 H31 C4 234.9 120.0
C2 C3 H31 H32 117.5 240.0
C4 C3 H31 H32 242.6 120.0
H31 C3 C4 C5 177.2 180.0
H31 C3 C4 C7 58.4 300.0
H31 C3 C4 H4 295.9 60.0
H32 C3 C2 H21 166.5 180.0
H32 C3 C2 H22 57.0 299.9
C2 C3 H32 C4 125.1 240.0
C2 C3 H32 H31 242.5 120.0
C4 C3 H32 H31 117.4 240.0
H32 C3 C4 C5 67.7 300.0
H32 C3 C4 C7 309.0 60.0
H32 C3 C4 H4 186.4 180.0
C1 C6 C5 C4 305.3 59.9
C5 C4 C3 H31 177.2 180.0
C5 C4 C3 H32 67.7 300.0
C3 C4 C5 C7 242.2 120.1
C3 C4 C5 H4 119.7 240.0
C7 C4 C5 H4 237.5 119.9
C5 C4 C7 N 65.4 300.0
C5 C4 C7 H71 190.7 180.0
C5 C4 C7 H72 300.2 60.0
C6 C5 C4 H51 234.7 240.1
C6 C5 C4 H52 125.3 120.1
C4 C5 C6 H61 180.0 300.0
C4 C5 C6 H62 70.6 180.0
H51 C5 C4 H52 250.6 240.0
C7 C4 C3 H31 58.4 300.0
C7 C4 C3 H32 309.0 60.0
C3 C4 C7 C5 121.8 239.9
C3 C4 C7 H4 240.4 120.0
C5 C4 C7 H4 118.6 240.1
C7 C4 C5 C6 174.2 180.0
C7 C4 C5 H51 299.5 299.9
C7 C4 C5 H52 48.9 59.9
N C7 C4 H71 234.7 120.1
N C7 C4 H72 125.2 240.0
C4 C7 N HN1 180.0 180.0
C4 C7 N HN2 54.7 293.7
H71 C7 C4 H72 250.5 119.9
H4 C4 C3 H31 295.9 60.0
H4 C4 C3 H32 186.4 180.0
C3 C4 H4 C5 237.7 120.0
C3 C4 H4 C7 118.4 240.0
C5 C4 H4 C7 240.7 120.0
H4 C4 C5 C6 296.8 60.1
H4 C4 C5 H51 62.1 180.0
H4 C4 C5 H52 171.5 300.0
H4 C4 C7 N 306.8 59.9
H4 C4 C7 H71 72.1 299.9
H4 C4 C7 H72 181.6 179.9
C5 C6 C1 C8 191.2 180.0
C5 C6 C1 H1 304.0 60.0
C1 C6 C5 H61 125.3 120.0
C1 C6 C5 H62 234.7 239.9
C6 C5 C4 C7 174.2 180.0
C6 C5 C4 H4 296.8 60.1
C4 C5 C6 H51 125.3 119.9
C4 C5 C6 H52 234.7 239.9
H51 C5 C6 H52 109.4 120.0
H61 C6 C5 H62 109.4 119.9
H51 C5 C4 C7 299.5 299.9
H51 C5 C4 H4 62.1 180.0
C4 C5 H51 C6 236.7 240.0
C4 C5 H51 H52 118.4 120.0
C6 C5 H51 H52 241.7 239.9
H51 C5 C6 H61 54.7 180.1
H51 C5 C6 H62 305.3 60.1
H52 C5 C4 C7 48.9 59.9
H52 C5 C4 H4 171.5 300.0
C4 C5 H52 C6 123.3 120.1
C4 C5 H52 H51 241.6 240.1
C6 C5 H52 H51 118.3 120.0
H52 C5 C6 H61 305.3 60.0
H52 C5 C6 H62 196.0 300.1
H61 C6 C1 C8 316.5 300.0
H61 C6 C1 H1 69.2 180.0
C1 C6 H61 C5 238.8 240.0
C1 C6 H61 H62 119.4 120.0
H61 C6 C5 H51 54.7 180.1
H61 C6 C5 H52 305.3 60.0
C5 C6 H61 H62 240.6 240.1
H62 C6 C1 C8 65.9 60.0
H62 C6 C1 H1 178.7 299.9
C1 C6 H62 C5 121.3 120.1
C1 C6 H62 H61 240.6 240.0
H62 C6 C5 H51 305.3 60.1
H62 C6 C5 H52 196.0 300.1
C5 C6 H62 H61 119.3 119.9
N C7 C4 H4 306.8 59.9
C4 C7 N H71 125.3 239.9
C4 C7 N H72 234.7 120.0
H71 C7 N H72 109.4 240.0
HN1 N C7 HN2 125.3 246.2
H71 C7 C4 H4 72.1 299.9
C4 C7 H71 N 246.4 120.1
C4 C7 H71 H72 123.3 240.1
N C7 H71 H72 236.8 120.0
H71 C7 N HN1 54.7 300.0
H71 C7 N HN2 289.4 53.8
H72 C7 C4 H4 181.6 179.9
C4 C7 H72 N 113.5 240.0
C4 C7 H72 H71 236.7 120.0
N C7 H72 H71 123.2 240.0
H72 C7 N HN1 305.3 60.0
H72 C7 N HN2 180.0 173.8
O1 C8 C1 H1 178.9 240.0
C1 C8 O1 O2 180.4 180.0
O1 C8 O2 HO2 0.4 0.0
O2 C8 C1 H1 359.3 60.1
C1 C8 O2 O1 179.7 180.0
HN1 N C7 H71 54.7 300.0
HN1 N C7 H72 305.3 60.0
C7 N HN1 HN2 234.7 113.8
HN2 N C7 H71 289.4 53.8
HN2 N C7 H72 180.0 173.8
C7 N HN2 HN1 113.6 246.2