PDB Chemical Component AMH
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for AMH
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.526 |
1.530 |
C1 |
C6 |
1.519 |
1.529 |
C1 |
C8 |
1.529 |
1.507 |
C1 |
H1 |
1.115 |
1.089 |
C2 |
C3 |
1.458 |
1.529 |
C2 |
H21 |
1.115 |
1.089 |
C2 |
H22 |
1.115 |
1.090 |
C3 |
C4 |
1.475 |
1.529 |
C3 |
H31 |
1.115 |
1.090 |
C3 |
H32 |
1.115 |
1.089 |
C4 |
C5 |
1.580 |
1.529 |
C4 |
C7 |
1.653 |
1.530 |
C4 |
H4 |
1.115 |
1.090 |
C5 |
C6 |
1.542 |
1.529 |
C5 |
H51 |
1.115 |
1.089 |
C5 |
H52 |
1.115 |
1.089 |
C6 |
H61 |
1.115 |
1.090 |
C6 |
H62 |
1.115 |
1.090 |
C7 |
N |
1.454 |
1.468 |
C7 |
H71 |
1.114 |
1.089 |
C7 |
H72 |
1.115 |
1.089 |
C8 |
O1 |
1.241 |
1.208 |
C8 |
O2 |
1.279 |
1.342 |
N |
HN1 |
1.020 |
1.010 |
N |
HN2 |
1.020 |
1.009 |
O2 |
HO2 |
0.949 |
0.967 |
Bond Angles for AMH
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
C6 |
114.3 |
109.5 |
C2 |
C1 |
C8 |
110.0 |
109.5 |
C2 |
C1 |
H1 |
109.1 |
109.4 |
C1 |
C2 |
C3 |
108.6 |
109.5 |
C1 |
C2 |
H21 |
112.5 |
109.5 |
C1 |
C2 |
H22 |
112.5 |
109.5 |
C6 |
C1 |
C8 |
117.4 |
109.5 |
C6 |
C1 |
H1 |
99.7 |
109.5 |
C1 |
C6 |
C5 |
106.1 |
109.5 |
C1 |
C6 |
H61 |
113.5 |
109.4 |
C1 |
C6 |
H62 |
113.5 |
109.5 |
C8 |
C1 |
H1 |
105.1 |
109.5 |
C1 |
C8 |
O1 |
129.9 |
120.0 |
C1 |
C8 |
O2 |
119.7 |
120.0 |
C3 |
C2 |
H21 |
112.6 |
109.5 |
C3 |
C2 |
H22 |
112.5 |
109.5 |
C2 |
C3 |
C4 |
111.3 |
109.5 |
C2 |
C3 |
H31 |
111.6 |
109.5 |
C2 |
C3 |
H32 |
111.5 |
109.5 |
H21 |
C2 |
H22 |
97.9 |
109.4 |
C4 |
C3 |
H31 |
111.5 |
109.5 |
C4 |
C3 |
H32 |
111.5 |
109.4 |
C3 |
C4 |
C5 |
112.9 |
109.5 |
C3 |
C4 |
C7 |
106.6 |
109.5 |
C3 |
C4 |
H4 |
108.8 |
109.5 |
H31 |
C3 |
H32 |
98.9 |
109.5 |
C5 |
C4 |
C7 |
108.3 |
109.5 |
C5 |
C4 |
H4 |
107.0 |
109.4 |
C4 |
C5 |
C6 |
108.8 |
109.5 |
C4 |
C5 |
H51 |
112.5 |
109.4 |
C4 |
C5 |
H52 |
112.5 |
109.5 |
C7 |
C4 |
H4 |
113.4 |
109.4 |
C4 |
C7 |
N |
95.7 |
109.5 |
C4 |
C7 |
H71 |
117.6 |
109.5 |
C4 |
C7 |
H72 |
117.6 |
109.4 |
C6 |
C5 |
H51 |
112.4 |
109.4 |
C6 |
C5 |
H52 |
112.4 |
109.5 |
C5 |
C6 |
H61 |
113.4 |
109.4 |
C5 |
C6 |
H62 |
113.5 |
109.5 |
H51 |
C5 |
H52 |
97.9 |
109.5 |
H61 |
C6 |
H62 |
96.9 |
109.4 |
N |
C7 |
H71 |
117.6 |
109.5 |
N |
C7 |
H72 |
117.5 |
109.5 |
C7 |
N |
HN1 |
95.7 |
106.7 |
C7 |
N |
HN2 |
117.6 |
106.7 |
H71 |
C7 |
H72 |
92.7 |
109.4 |
O1 |
C8 |
O2 |
110.3 |
120.0 |
C8 |
O2 |
HO2 |
119.7 |
120.0 |
HN1 |
N |
HN2 |
117.6 |
106.7 |
Torsion Angles for AMH
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C6 |
C1 |
C2 |
C8 |
134.6 |
240.0 |
C6 |
C1 |
C2 |
H1 |
249.4 |
120.0 |
C2 |
C1 |
C6 |
C5 |
60.2 |
300.0 |
C2 |
C1 |
C6 |
H61 |
185.4 |
60.0 |
C2 |
C1 |
C6 |
H62 |
294.8 |
180.0 |
C8 |
C1 |
C2 |
H1 |
114.8 |
240.0 |
C2 |
C1 |
C8 |
O1 |
61.6 |
360.0 |
C2 |
C1 |
C8 |
O2 |
242.0 |
180.0 |
C3 |
C2 |
C1 |
H21 |
234.7 |
120.0 |
C3 |
C2 |
C1 |
H22 |
125.3 |
240.0 |
C1 |
C2 |
C3 |
C4 |
57.0 |
300.0 |
C1 |
C2 |
C3 |
H31 |
182.2 |
180.0 |
C1 |
C2 |
C3 |
H32 |
291.8 |
60.0 |
H21 |
C2 |
C1 |
H22 |
250.5 |
119.9 |
C2 |
C1 |
C6 |
C8 |
228.9 |
120.0 |
C2 |
C1 |
C6 |
H1 |
116.2 |
240.0 |
C6 |
C1 |
C2 |
C3 |
298.8 |
60.0 |
C6 |
C1 |
C2 |
H21 |
64.0 |
300.0 |
C6 |
C1 |
C2 |
H22 |
173.5 |
180.0 |
C8 |
C1 |
C6 |
H1 |
247.2 |
120.0 |
C6 |
C1 |
C8 |
O1 |
288.6 |
120.0 |
C6 |
C1 |
C8 |
O2 |
109.0 |
300.0 |
C4 |
C5 |
C6 |
C1 |
305.3 |
59.9 |
C1 |
C6 |
C5 |
H51 |
180.0 |
300.0 |
C1 |
C6 |
C5 |
H52 |
70.6 |
180.0 |
C5 |
C6 |
C1 |
H61 |
234.8 |
240.0 |
C5 |
C6 |
C1 |
H62 |
125.3 |
120.1 |
H61 |
C6 |
C1 |
H62 |
250.5 |
240.0 |
C2 |
C1 |
C8 |
C6 |
133.0 |
240.0 |
C2 |
C1 |
C8 |
H1 |
242.7 |
120.0 |
C8 |
C1 |
C2 |
C3 |
164.2 |
180.0 |
C8 |
C1 |
C2 |
H21 |
289.4 |
60.0 |
C8 |
C1 |
C2 |
H22 |
38.9 |
300.1 |
C6 |
C1 |
C8 |
H1 |
109.7 |
240.0 |
C8 |
C1 |
C6 |
C5 |
191.2 |
180.0 |
C8 |
C1 |
C6 |
H61 |
316.5 |
300.0 |
C8 |
C1 |
C6 |
H62 |
65.9 |
60.0 |
O1 |
C8 |
C1 |
O2 |
179.6 |
180.0 |
C1 |
C8 |
O2 |
HO2 |
180.1 |
180.0 |
C2 |
C1 |
H1 |
C6 |
240.0 |
120.0 |
C2 |
C1 |
H1 |
C8 |
117.9 |
240.0 |
H1 |
C1 |
C2 |
C3 |
49.4 |
300.0 |
H1 |
C1 |
C2 |
H21 |
174.6 |
180.0 |
H1 |
C1 |
C2 |
H22 |
284.1 |
60.0 |
C6 |
C1 |
H1 |
C8 |
238.0 |
120.0 |
H1 |
C1 |
C6 |
C5 |
304.0 |
60.0 |
H1 |
C1 |
C6 |
H61 |
69.2 |
180.0 |
H1 |
C1 |
C6 |
H62 |
178.7 |
299.9 |
H1 |
C1 |
C8 |
O1 |
178.9 |
240.0 |
H1 |
C1 |
C8 |
O2 |
359.3 |
60.1 |
C3 |
C2 |
C1 |
C6 |
298.8 |
60.0 |
C3 |
C2 |
C1 |
C8 |
164.2 |
180.0 |
C3 |
C2 |
C1 |
H1 |
49.4 |
300.0 |
C1 |
C2 |
C3 |
H21 |
125.2 |
240.0 |
C1 |
C2 |
C3 |
H22 |
234.7 |
120.0 |
H21 |
C2 |
C3 |
H22 |
109.5 |
240.1 |
C4 |
C3 |
C2 |
H31 |
234.7 |
120.0 |
C4 |
C3 |
C2 |
H32 |
125.2 |
240.1 |
C2 |
C3 |
C4 |
C5 |
302.5 |
59.9 |
C2 |
C3 |
C4 |
C7 |
183.7 |
180.0 |
C2 |
C3 |
C4 |
H4 |
61.2 |
300.0 |
H31 |
C3 |
C2 |
H32 |
250.5 |
120.0 |
H21 |
C2 |
C1 |
C6 |
64.0 |
300.0 |
H21 |
C2 |
C1 |
C8 |
289.4 |
60.0 |
H21 |
C2 |
C1 |
H1 |
174.6 |
180.0 |
C1 |
C2 |
H21 |
C3 |
236.9 |
120.0 |
C1 |
C2 |
H21 |
H22 |
118.4 |
240.0 |
C3 |
C2 |
H21 |
H22 |
241.5 |
120.0 |
H21 |
C2 |
C3 |
C4 |
291.8 |
60.1 |
H21 |
C2 |
C3 |
H31 |
57.0 |
300.0 |
H21 |
C2 |
C3 |
H32 |
166.5 |
180.0 |
H22 |
C2 |
C1 |
C6 |
173.5 |
180.0 |
H22 |
C2 |
C1 |
C8 |
38.9 |
300.1 |
H22 |
C2 |
C1 |
H1 |
284.1 |
60.0 |
C1 |
C2 |
H22 |
C3 |
123.1 |
240.0 |
C1 |
C2 |
H22 |
H21 |
241.6 |
120.0 |
C3 |
C2 |
H22 |
H21 |
118.5 |
240.0 |
H22 |
C2 |
C3 |
C4 |
182.2 |
180.0 |
H22 |
C2 |
C3 |
H31 |
307.5 |
60.0 |
H22 |
C2 |
C3 |
H32 |
57.0 |
299.9 |
C4 |
C3 |
C2 |
H21 |
291.8 |
60.1 |
C4 |
C3 |
C2 |
H22 |
182.2 |
180.0 |
C2 |
C3 |
C4 |
H31 |
125.3 |
240.0 |
C2 |
C3 |
C4 |
H32 |
234.8 |
120.0 |
H31 |
C3 |
C4 |
H32 |
109.5 |
240.0 |
C5 |
C4 |
C3 |
C7 |
118.8 |
239.9 |
C5 |
C4 |
C3 |
H4 |
241.3 |
119.9 |
C3 |
C4 |
C5 |
C6 |
56.4 |
300.1 |
C3 |
C4 |
C5 |
H51 |
181.7 |
60.0 |
C3 |
C4 |
C5 |
H52 |
291.2 |
180.0 |
C7 |
C4 |
C3 |
H4 |
122.6 |
240.0 |
C3 |
C4 |
C7 |
N |
187.1 |
180.0 |
C3 |
C4 |
C7 |
H71 |
312.4 |
59.9 |
C3 |
C4 |
C7 |
H72 |
61.9 |
299.9 |
H31 |
C3 |
C2 |
H21 |
57.0 |
300.0 |
H31 |
C3 |
C2 |
H22 |
307.5 |
60.0 |
C2 |
C3 |
H31 |
C4 |
234.9 |
120.0 |
C2 |
C3 |
H31 |
H32 |
117.5 |
240.0 |
C4 |
C3 |
H31 |
H32 |
242.6 |
120.0 |
H31 |
C3 |
C4 |
C5 |
177.2 |
180.0 |
H31 |
C3 |
C4 |
C7 |
58.4 |
300.0 |
H31 |
C3 |
C4 |
H4 |
295.9 |
60.0 |
H32 |
C3 |
C2 |
H21 |
166.5 |
180.0 |
H32 |
C3 |
C2 |
H22 |
57.0 |
299.9 |
C2 |
C3 |
H32 |
C4 |
125.1 |
240.0 |
C2 |
C3 |
H32 |
H31 |
242.5 |
120.0 |
C4 |
C3 |
H32 |
H31 |
117.4 |
240.0 |
H32 |
C3 |
C4 |
C5 |
67.7 |
300.0 |
H32 |
C3 |
C4 |
C7 |
309.0 |
60.0 |
H32 |
C3 |
C4 |
H4 |
186.4 |
180.0 |
C1 |
C6 |
C5 |
C4 |
305.3 |
59.9 |
C5 |
C4 |
C3 |
H31 |
177.2 |
180.0 |
C5 |
C4 |
C3 |
H32 |
67.7 |
300.0 |
C3 |
C4 |
C5 |
C7 |
242.2 |
120.1 |
C3 |
C4 |
C5 |
H4 |
119.7 |
240.0 |
C7 |
C4 |
C5 |
H4 |
237.5 |
119.9 |
C5 |
C4 |
C7 |
N |
65.4 |
300.0 |
C5 |
C4 |
C7 |
H71 |
190.7 |
180.0 |
C5 |
C4 |
C7 |
H72 |
300.2 |
60.0 |
C6 |
C5 |
C4 |
H51 |
234.7 |
240.1 |
C6 |
C5 |
C4 |
H52 |
125.3 |
120.1 |
C4 |
C5 |
C6 |
H61 |
180.0 |
300.0 |
C4 |
C5 |
C6 |
H62 |
70.6 |
180.0 |
H51 |
C5 |
C4 |
H52 |
250.6 |
240.0 |
C7 |
C4 |
C3 |
H31 |
58.4 |
300.0 |
C7 |
C4 |
C3 |
H32 |
309.0 |
60.0 |
C3 |
C4 |
C7 |
C5 |
121.8 |
239.9 |
C3 |
C4 |
C7 |
H4 |
240.4 |
120.0 |
C5 |
C4 |
C7 |
H4 |
118.6 |
240.1 |
C7 |
C4 |
C5 |
C6 |
174.2 |
180.0 |
C7 |
C4 |
C5 |
H51 |
299.5 |
299.9 |
C7 |
C4 |
C5 |
H52 |
48.9 |
59.9 |
N |
C7 |
C4 |
H71 |
234.7 |
120.1 |
N |
C7 |
C4 |
H72 |
125.2 |
240.0 |
C4 |
C7 |
N |
HN1 |
180.0 |
180.0 |
C4 |
C7 |
N |
HN2 |
54.7 |
293.7 |
H71 |
C7 |
C4 |
H72 |
250.5 |
119.9 |
H4 |
C4 |
C3 |
H31 |
295.9 |
60.0 |
H4 |
C4 |
C3 |
H32 |
186.4 |
180.0 |
C3 |
C4 |
H4 |
C5 |
237.7 |
120.0 |
C3 |
C4 |
H4 |
C7 |
118.4 |
240.0 |
C5 |
C4 |
H4 |
C7 |
240.7 |
120.0 |
H4 |
C4 |
C5 |
C6 |
296.8 |
60.1 |
H4 |
C4 |
C5 |
H51 |
62.1 |
180.0 |
H4 |
C4 |
C5 |
H52 |
171.5 |
300.0 |
H4 |
C4 |
C7 |
N |
306.8 |
59.9 |
H4 |
C4 |
C7 |
H71 |
72.1 |
299.9 |
H4 |
C4 |
C7 |
H72 |
181.6 |
179.9 |
C5 |
C6 |
C1 |
C8 |
191.2 |
180.0 |
C5 |
C6 |
C1 |
H1 |
304.0 |
60.0 |
C1 |
C6 |
C5 |
H61 |
125.3 |
120.0 |
C1 |
C6 |
C5 |
H62 |
234.7 |
239.9 |
C6 |
C5 |
C4 |
C7 |
174.2 |
180.0 |
C6 |
C5 |
C4 |
H4 |
296.8 |
60.1 |
C4 |
C5 |
C6 |
H51 |
125.3 |
119.9 |
C4 |
C5 |
C6 |
H52 |
234.7 |
239.9 |
H51 |
C5 |
C6 |
H52 |
109.4 |
120.0 |
H61 |
C6 |
C5 |
H62 |
109.4 |
119.9 |
H51 |
C5 |
C4 |
C7 |
299.5 |
299.9 |
H51 |
C5 |
C4 |
H4 |
62.1 |
180.0 |
C4 |
C5 |
H51 |
C6 |
236.7 |
240.0 |
C4 |
C5 |
H51 |
H52 |
118.4 |
120.0 |
C6 |
C5 |
H51 |
H52 |
241.7 |
239.9 |
H51 |
C5 |
C6 |
H61 |
54.7 |
180.1 |
H51 |
C5 |
C6 |
H62 |
305.3 |
60.1 |
H52 |
C5 |
C4 |
C7 |
48.9 |
59.9 |
H52 |
C5 |
C4 |
H4 |
171.5 |
300.0 |
C4 |
C5 |
H52 |
C6 |
123.3 |
120.1 |
C4 |
C5 |
H52 |
H51 |
241.6 |
240.1 |
C6 |
C5 |
H52 |
H51 |
118.3 |
120.0 |
H52 |
C5 |
C6 |
H61 |
305.3 |
60.0 |
H52 |
C5 |
C6 |
H62 |
196.0 |
300.1 |
H61 |
C6 |
C1 |
C8 |
316.5 |
300.0 |
H61 |
C6 |
C1 |
H1 |
69.2 |
180.0 |
C1 |
C6 |
H61 |
C5 |
238.8 |
240.0 |
C1 |
C6 |
H61 |
H62 |
119.4 |
120.0 |
H61 |
C6 |
C5 |
H51 |
54.7 |
180.1 |
H61 |
C6 |
C5 |
H52 |
305.3 |
60.0 |
C5 |
C6 |
H61 |
H62 |
240.6 |
240.1 |
H62 |
C6 |
C1 |
C8 |
65.9 |
60.0 |
H62 |
C6 |
C1 |
H1 |
178.7 |
299.9 |
C1 |
C6 |
H62 |
C5 |
121.3 |
120.1 |
C1 |
C6 |
H62 |
H61 |
240.6 |
240.0 |
H62 |
C6 |
C5 |
H51 |
305.3 |
60.1 |
H62 |
C6 |
C5 |
H52 |
196.0 |
300.1 |
C5 |
C6 |
H62 |
H61 |
119.3 |
119.9 |
N |
C7 |
C4 |
H4 |
306.8 |
59.9 |
C4 |
C7 |
N |
H71 |
125.3 |
239.9 |
C4 |
C7 |
N |
H72 |
234.7 |
120.0 |
H71 |
C7 |
N |
H72 |
109.4 |
240.0 |
HN1 |
N |
C7 |
HN2 |
125.3 |
246.2 |
H71 |
C7 |
C4 |
H4 |
72.1 |
299.9 |
C4 |
C7 |
H71 |
N |
246.4 |
120.1 |
C4 |
C7 |
H71 |
H72 |
123.3 |
240.1 |
N |
C7 |
H71 |
H72 |
236.8 |
120.0 |
H71 |
C7 |
N |
HN1 |
54.7 |
300.0 |
H71 |
C7 |
N |
HN2 |
289.4 |
53.8 |
H72 |
C7 |
C4 |
H4 |
181.6 |
179.9 |
C4 |
C7 |
H72 |
N |
113.5 |
240.0 |
C4 |
C7 |
H72 |
H71 |
236.7 |
120.0 |
N |
C7 |
H72 |
H71 |
123.2 |
240.0 |
H72 |
C7 |
N |
HN1 |
305.3 |
60.0 |
H72 |
C7 |
N |
HN2 |
180.0 |
173.8 |
O1 |
C8 |
C1 |
H1 |
178.9 |
240.0 |
C1 |
C8 |
O1 |
O2 |
180.4 |
180.0 |
O1 |
C8 |
O2 |
HO2 |
0.4 |
0.0 |
O2 |
C8 |
C1 |
H1 |
359.3 |
60.1 |
C1 |
C8 |
O2 |
O1 |
179.7 |
180.0 |
HN1 |
N |
C7 |
H71 |
54.7 |
300.0 |
HN1 |
N |
C7 |
H72 |
305.3 |
60.0 |
C7 |
N |
HN1 |
HN2 |
234.7 |
113.8 |
HN2 |
N |
C7 |
H71 |
289.4 |
53.8 |
HN2 |
N |
C7 |
H72 |
180.0 |
173.8 |
C7 |
N |
HN2 |
HN1 |
113.6 |
246.2 |