PDB Chemical Component ALQ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for ALQ
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| CM |
CA |
1.524 |
1.530 |
| CM |
HM1 |
1.100 |
1.091 |
| CM |
HM2 |
1.101 |
1.090 |
| CM |
HM3 |
1.100 |
1.090 |
| CA |
CB |
1.553 |
1.530 |
| CA |
C |
1.518 |
1.507 |
| CA |
HA |
1.100 |
1.089 |
| CB |
HB1 |
1.100 |
1.090 |
| CB |
HB2 |
1.100 |
1.089 |
| CB |
HB3 |
1.100 |
1.091 |
| C |
O |
1.246 |
1.208 |
| C |
OXT |
1.330 |
1.342 |
| OXT |
HXT |
0.950 |
0.966 |
Bond Angles for ALQ
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
CM |
HM1 |
109.5 |
109.5 |
| CA |
CM |
HM2 |
109.5 |
109.5 |
| CA |
CM |
HM3 |
109.4 |
109.5 |
| CM |
CA |
CB |
111.0 |
109.5 |
| CM |
CA |
C |
109.0 |
109.4 |
| CM |
CA |
HA |
108.9 |
109.5 |
| HM1 |
CM |
HM2 |
109.4 |
109.5 |
| HM1 |
CM |
HM3 |
109.5 |
109.4 |
| HM2 |
CM |
HM3 |
109.5 |
109.5 |
| CB |
CA |
C |
109.8 |
109.4 |
| CB |
CA |
HA |
108.1 |
109.5 |
| CA |
CB |
HB1 |
109.5 |
109.5 |
| CA |
CB |
HB2 |
109.4 |
109.5 |
| CA |
CB |
HB3 |
109.5 |
109.5 |
| C |
CA |
HA |
110.1 |
109.5 |
| CA |
C |
O |
120.8 |
120.0 |
| CA |
C |
OXT |
116.3 |
120.0 |
| HB1 |
CB |
HB2 |
109.5 |
109.5 |
| HB1 |
CB |
HB3 |
109.5 |
109.4 |
| HB2 |
CB |
HB3 |
109.5 |
109.5 |
| O |
C |
OXT |
122.9 |
120.0 |
| C |
OXT |
HXT |
109.5 |
117.1 |
Torsion Angles for ALQ
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| HM1 |
CM |
CA |
HM2 |
240.0 |
240.0 |
| HM1 |
CM |
CA |
HM3 |
120.0 |
119.9 |
| HM2 |
CM |
CA |
HM3 |
240.0 |
239.9 |
| CB |
CA |
CM |
C |
239.0 |
240.1 |
| CB |
CA |
CM |
HA |
118.9 |
120.1 |
| CM |
CA |
CB |
HB1 |
180.0 |
59.9 |
| CM |
CA |
CB |
HB2 |
300.0 |
180.0 |
| CM |
CA |
CB |
HB3 |
60.0 |
300.0 |
| C |
CA |
CM |
HA |
239.9 |
240.0 |
| CM |
CA |
C |
O |
318.3 |
240.0 |
| CM |
CA |
C |
OXT |
139.7 |
60.0 |
| CA |
CM |
HM1 |
HM2 |
120.0 |
120.0 |
| CA |
CM |
HM1 |
HM3 |
240.0 |
240.0 |
| HM1 |
CM |
CA |
CB |
180.0 |
60.0 |
| HM1 |
CM |
CA |
C |
301.0 |
180.0 |
| HM1 |
CM |
CA |
HA |
61.1 |
299.9 |
| HM2 |
CM |
HM1 |
HM3 |
120.0 |
120.0 |
| CA |
CM |
HM2 |
HM1 |
240.0 |
240.0 |
| CA |
CM |
HM2 |
HM3 |
120.0 |
120.1 |
| HM2 |
CM |
CA |
CB |
300.0 |
180.0 |
| HM2 |
CM |
CA |
C |
61.0 |
300.0 |
| HM2 |
CM |
CA |
HA |
181.1 |
59.9 |
| HM1 |
CM |
HM2 |
HM3 |
240.0 |
240.1 |
| CA |
CM |
HM3 |
HM1 |
120.0 |
120.0 |
| CA |
CM |
HM3 |
HM2 |
240.0 |
239.9 |
| HM3 |
CM |
CA |
CB |
60.0 |
300.1 |
| HM3 |
CM |
CA |
C |
181.0 |
60.0 |
| HM3 |
CM |
CA |
HA |
301.1 |
180.0 |
| HM1 |
CM |
HM3 |
HM2 |
120.0 |
120.0 |
| CB |
CA |
CM |
HM1 |
180.0 |
60.0 |
| CB |
CA |
CM |
HM2 |
300.0 |
180.0 |
| CB |
CA |
CM |
HM3 |
60.0 |
300.1 |
| CM |
CA |
CB |
C |
120.5 |
119.9 |
| CM |
CA |
CB |
HA |
240.7 |
239.9 |
| C |
CA |
CB |
HA |
120.2 |
120.0 |
| CB |
CA |
C |
O |
80.0 |
360.0 |
| CB |
CA |
C |
OXT |
261.4 |
180.0 |
| HB1 |
CB |
CA |
HB2 |
240.0 |
240.0 |
| HB1 |
CB |
CA |
HB3 |
120.0 |
119.9 |
| HB2 |
CB |
CA |
HB3 |
240.0 |
240.0 |
| C |
CA |
CM |
HM1 |
301.0 |
180.0 |
| C |
CA |
CM |
HM2 |
61.0 |
300.0 |
| C |
CA |
CM |
HM3 |
181.0 |
60.0 |
| CM |
CA |
C |
CB |
238.3 |
240.0 |
| CM |
CA |
C |
HA |
119.4 |
120.0 |
| CB |
CA |
C |
HA |
241.1 |
240.0 |
| C |
CA |
CB |
HB1 |
59.5 |
300.0 |
| C |
CA |
CB |
HB2 |
179.5 |
60.0 |
| C |
CA |
CB |
HB3 |
299.5 |
180.0 |
| O |
C |
CA |
OXT |
178.6 |
180.0 |
| CA |
C |
OXT |
HXT |
178.6 |
179.9 |
| HA |
CA |
CM |
HM1 |
61.1 |
299.9 |
| HA |
CA |
CM |
HM2 |
181.1 |
59.9 |
| HA |
CA |
CM |
HM3 |
301.1 |
180.0 |
| CM |
CA |
HA |
CB |
120.6 |
120.1 |
| CM |
CA |
HA |
C |
240.6 |
240.0 |
| CB |
CA |
HA |
C |
119.9 |
120.0 |
| HA |
CA |
CB |
HB1 |
299.3 |
180.0 |
| HA |
CA |
CB |
HB2 |
59.3 |
300.0 |
| HA |
CA |
CB |
HB3 |
179.3 |
60.0 |
| HA |
CA |
C |
O |
199.0 |
120.0 |
| HA |
CA |
C |
OXT |
20.4 |
300.0 |
| HB1 |
CB |
CA |
C |
59.5 |
300.0 |
| HB1 |
CB |
CA |
HA |
299.3 |
180.0 |
| CA |
CB |
HB1 |
HB2 |
120.0 |
120.0 |
| CA |
CB |
HB1 |
HB3 |
240.0 |
240.0 |
| HB2 |
CB |
HB1 |
HB3 |
120.1 |
120.0 |
| HB2 |
CB |
CA |
C |
179.5 |
60.0 |
| HB2 |
CB |
CA |
HA |
59.3 |
300.0 |
| CA |
CB |
HB2 |
HB1 |
240.0 |
240.0 |
| CA |
CB |
HB2 |
HB3 |
120.0 |
120.0 |
| HB1 |
CB |
HB2 |
HB3 |
240.0 |
240.0 |
| HB3 |
CB |
CA |
C |
299.5 |
180.0 |
| HB3 |
CB |
CA |
HA |
179.3 |
60.0 |
| CA |
CB |
HB3 |
HB1 |
120.0 |
120.0 |
| CA |
CB |
HB3 |
HB2 |
240.0 |
240.0 |
| HB1 |
CB |
HB3 |
HB2 |
120.0 |
120.0 |
| O |
C |
CA |
HA |
199.0 |
120.0 |
| CA |
C |
O |
OXT |
181.5 |
180.0 |
| O |
C |
OXT |
HXT |
0.0 |
360.0 |
| OXT |
C |
CA |
HA |
20.4 |
300.0 |
| CA |
C |
OXT |
O |
178.6 |
180.0 |