PDB Chemical Component ALO
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for ALO
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| N |
CA |
1.472 |
1.470 |
| N |
H |
1.020 |
1.008 |
| N |
H2 |
1.019 |
1.008 |
| CA |
CB |
1.569 |
1.529 |
| CA |
C |
1.533 |
1.506 |
| CA |
HA |
1.115 |
1.089 |
| CB |
CG2 |
1.544 |
1.529 |
| CB |
OG1 |
1.439 |
1.430 |
| CB |
HB |
1.115 |
1.089 |
| CG2 |
HG21 |
1.115 |
1.089 |
| CG2 |
HG22 |
1.115 |
1.090 |
| CG2 |
HG23 |
1.115 |
1.091 |
| OG1 |
HG1 |
0.950 |
0.966 |
| C |
O |
1.225 |
1.208 |
| C |
OXT |
1.332 |
1.342 |
| OXT |
HXT |
0.950 |
0.967 |
Bond Angles for ALO
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| CA |
N |
H |
114.1 |
106.7 |
| CA |
N |
H2 |
110.5 |
106.7 |
| N |
CA |
CB |
114.1 |
109.4 |
| N |
CA |
C |
112.1 |
109.5 |
| N |
CA |
HA |
104.8 |
109.5 |
| H |
N |
H2 |
110.6 |
106.8 |
| CB |
CA |
C |
111.2 |
109.5 |
| CB |
CA |
HA |
105.9 |
109.5 |
| CA |
CB |
CG2 |
111.7 |
109.6 |
| CA |
CB |
OG1 |
109.7 |
109.4 |
| CA |
CB |
HB |
107.2 |
109.5 |
| C |
CA |
HA |
108.1 |
109.5 |
| CA |
C |
O |
121.0 |
120.0 |
| CA |
C |
OXT |
115.3 |
120.0 |
| CG2 |
CB |
OG1 |
107.7 |
109.4 |
| CG2 |
CB |
HB |
109.3 |
109.5 |
| CB |
CG2 |
HG21 |
111.7 |
109.6 |
| CB |
CG2 |
HG22 |
111.3 |
109.5 |
| CB |
CG2 |
HG23 |
111.4 |
109.5 |
| OG1 |
CB |
HB |
111.3 |
109.4 |
| CB |
OG1 |
HG1 |
109.7 |
106.8 |
| HG21 |
CG2 |
HG22 |
111.4 |
109.5 |
| HG21 |
CG2 |
HG23 |
111.4 |
109.5 |
| HG22 |
CG2 |
HG23 |
99.0 |
109.3 |
| O |
C |
OXT |
123.6 |
119.9 |
| C |
OXT |
HXT |
115.3 |
120.0 |
Torsion Angles for ALO
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| H |
N |
CA |
H2 |
125.3 |
113.9 |
| CB |
CA |
N |
C |
232.5 |
240.0 |
| CB |
CA |
N |
HA |
115.4 |
120.0 |
| N |
CA |
CB |
CG2 |
301.4 |
300.0 |
| N |
CA |
CB |
OG1 |
182.1 |
180.0 |
| N |
CA |
CB |
HB |
61.1 |
60.1 |
| C |
CA |
N |
HA |
242.9 |
240.0 |
| N |
CA |
C |
O |
322.7 |
330.1 |
| N |
CA |
C |
OXT |
138.8 |
150.0 |
| CA |
N |
H |
H2 |
234.8 |
246.2 |
| H |
N |
CA |
CB |
180.0 |
53.8 |
| H |
N |
CA |
C |
307.6 |
173.8 |
| H |
N |
CA |
HA |
64.7 |
293.8 |
| CA |
N |
H2 |
H |
127.3 |
113.8 |
| H2 |
N |
CA |
CB |
54.8 |
300.0 |
| H2 |
N |
CA |
C |
182.3 |
59.9 |
| H2 |
N |
CA |
HA |
299.4 |
180.0 |
| CB |
CA |
N |
H |
180.0 |
53.8 |
| CB |
CA |
N |
H2 |
54.8 |
300.0 |
| N |
CA |
CB |
C |
128.0 |
120.0 |
| N |
CA |
CB |
HA |
245.2 |
240.0 |
| C |
CA |
CB |
HA |
117.2 |
120.1 |
| CB |
CA |
C |
O |
91.8 |
90.0 |
| CB |
CA |
C |
OXT |
267.9 |
269.9 |
| CG2 |
CB |
CA |
OG1 |
119.4 |
120.0 |
| CG2 |
CB |
CA |
HB |
240.3 |
239.9 |
| CA |
CB |
CG2 |
HG21 |
180.0 |
180.0 |
| CA |
CB |
CG2 |
HG22 |
305.3 |
300.2 |
| CA |
CB |
CG2 |
HG23 |
54.7 |
59.9 |
| OG1 |
CB |
CA |
HB |
120.9 |
119.9 |
| CA |
CB |
OG1 |
HG1 |
180.0 |
60.1 |
| C |
CA |
N |
H |
307.6 |
173.8 |
| C |
CA |
N |
H2 |
182.3 |
59.9 |
| N |
CA |
C |
CB |
230.9 |
240.1 |
| N |
CA |
C |
HA |
115.1 |
120.0 |
| CB |
CA |
C |
HA |
244.2 |
239.9 |
| C |
CA |
CB |
CG2 |
173.4 |
180.0 |
| C |
CA |
CB |
OG1 |
54.1 |
60.0 |
| C |
CA |
CB |
HB |
293.1 |
300.1 |
| O |
C |
CA |
OXT |
183.9 |
180.1 |
| CA |
C |
OXT |
HXT |
180.0 |
180.1 |
| HA |
CA |
N |
H |
64.7 |
293.8 |
| HA |
CA |
N |
H2 |
299.4 |
180.0 |
| N |
CA |
HA |
CB |
121.0 |
119.9 |
| N |
CA |
HA |
C |
240.2 |
240.0 |
| CB |
CA |
HA |
C |
119.2 |
120.1 |
| HA |
CA |
CB |
CG2 |
56.2 |
59.9 |
| HA |
CA |
CB |
OG1 |
296.8 |
299.9 |
| HA |
CA |
CB |
HB |
175.9 |
180.0 |
| HA |
CA |
C |
O |
207.6 |
210.1 |
| HA |
CA |
C |
OXT |
23.7 |
30.0 |
| CG2 |
CB |
CA |
C |
173.4 |
180.0 |
| CG2 |
CB |
CA |
HA |
56.2 |
59.9 |
| CA |
CB |
CG2 |
OG1 |
239.5 |
240.0 |
| CA |
CB |
CG2 |
HB |
118.5 |
120.1 |
| OG1 |
CB |
CG2 |
HB |
239.0 |
240.1 |
| CG2 |
CB |
OG1 |
HG1 |
58.2 |
300.0 |
| HG21 |
CG2 |
CB |
HG22 |
234.7 |
239.9 |
| HG21 |
CG2 |
CB |
HG23 |
125.3 |
120.1 |
| HG22 |
CG2 |
CB |
HG23 |
250.5 |
240.2 |
| OG1 |
CB |
CA |
C |
54.1 |
60.0 |
| OG1 |
CB |
CA |
HA |
296.8 |
299.9 |
| CA |
CB |
OG1 |
CG2 |
121.8 |
120.1 |
| CA |
CB |
OG1 |
HB |
241.6 |
240.0 |
| CG2 |
CB |
OG1 |
HB |
119.7 |
119.9 |
| OG1 |
CB |
CG2 |
HG21 |
300.5 |
300.0 |
| OG1 |
CB |
CG2 |
HG22 |
65.8 |
60.1 |
| OG1 |
CB |
CG2 |
HG23 |
175.3 |
179.9 |
| HB |
CB |
CA |
C |
293.1 |
300.1 |
| HB |
CB |
CA |
HA |
175.9 |
180.0 |
| CA |
CB |
HB |
CG2 |
238.7 |
239.8 |
| CA |
CB |
HB |
OG1 |
119.9 |
119.9 |
| CG2 |
CB |
HB |
OG1 |
241.2 |
240.1 |
| HB |
CB |
CG2 |
HG21 |
61.5 |
59.9 |
| HB |
CB |
CG2 |
HG22 |
186.8 |
180.0 |
| HB |
CB |
CG2 |
HG23 |
296.3 |
299.8 |
| HB |
CB |
OG1 |
HG1 |
298.5 |
180.1 |
| HG21 |
CG2 |
CB |
OG1 |
300.5 |
300.0 |
| HG21 |
CG2 |
CB |
HB |
61.5 |
59.9 |
| CB |
CG2 |
HG21 |
HG22 |
125.2 |
120.1 |
| CB |
CG2 |
HG21 |
HG23 |
234.8 |
239.9 |
| HG22 |
CG2 |
HG21 |
HG23 |
109.5 |
119.8 |
| HG22 |
CG2 |
CB |
OG1 |
65.8 |
60.1 |
| HG22 |
CG2 |
CB |
HB |
186.8 |
180.0 |
| CB |
CG2 |
HG22 |
HG21 |
234.6 |
239.8 |
| CB |
CG2 |
HG22 |
HG23 |
117.2 |
119.9 |
| HG21 |
CG2 |
HG22 |
HG23 |
242.7 |
240.1 |
| HG23 |
CG2 |
CB |
OG1 |
175.3 |
179.9 |
| HG23 |
CG2 |
CB |
HB |
296.3 |
299.8 |
| CB |
CG2 |
HG23 |
HG21 |
125.4 |
120.1 |
| CB |
CG2 |
HG23 |
HG22 |
242.8 |
240.1 |
| HG21 |
CG2 |
HG23 |
HG22 |
117.3 |
120.0 |
| HG1 |
OG1 |
CB |
HB |
298.5 |
180.1 |
| O |
C |
CA |
HA |
207.6 |
210.1 |
| CA |
C |
O |
OXT |
175.8 |
179.9 |
| O |
C |
OXT |
HXT |
356.0 |
360.0 |
| OXT |
C |
CA |
HA |
23.7 |
30.0 |
| CA |
C |
OXT |
O |
184.0 |
180.1 |