PDB Chemical Component ALL

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for ALL

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.548 1.531
C1 O1 1.410 1.430
C1 O5 1.414 1.429
C1 H1 1.101 1.090
C2 C3 1.526 1.531
C2 O2 1.416 1.430
C2 H2 1.099 1.091
C3 C4 1.534 1.532
C3 O3 1.469 1.429
C3 H3 1.100 1.090
C4 C5 1.535 1.532
C4 O4 1.432 1.429
C4 H4 1.100 1.090
C5 C6 1.495 1.529
C5 O5 1.422 1.428
C5 H5 1.100 1.090
C6 O6 1.453 1.430
C6 H61 1.100 1.090
C6 H62 1.100 1.091
O1 HO1 0.950 0.967
O2 HO2 0.950 0.966
O3 HO3 0.950 0.966
O4 HO4 0.950 0.967
O6 HO6 0.950 0.966

Bond Angles for ALL

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 O1 111.9 109.5
C2 C1 O5 108.2 109.4
C2 C1 H1 107.7 109.4
C1 C2 C3 110.0 109.2
C1 C2 O2 109.2 109.5
C1 C2 H2 108.5 109.5
O1 C1 O5 110.2 109.5
O1 C1 H1 109.4 109.5
C1 O1 HO1 109.5 113.9
O5 C1 H1 109.4 109.5
C1 O5 C5 114.3 114.1
C3 C2 O2 109.9 109.5
C3 C2 H2 108.8 109.5
C2 C3 C4 109.0 109.1
C2 C3 O3 107.8 109.6
C2 C3 H3 110.3 109.6
O2 C2 H2 110.3 109.6
C2 O2 HO2 109.5 114.0
C4 C3 O3 108.5 109.6
C4 C3 H3 110.2 109.5
C3 C4 C5 108.0 109.1
C3 C4 O4 112.2 109.6
C3 C4 H4 109.2 109.5
O3 C3 H3 111.1 109.6
C3 O3 HO3 109.5 114.0
C5 C4 O4 107.4 109.5
C5 C4 H4 109.2 109.5
C4 C5 C6 115.9 109.4
C4 C5 O5 111.2 109.4
C4 C5 H5 105.7 109.5
O4 C4 H4 110.6 109.6
C4 O4 HO4 109.5 114.0
C6 C5 O5 110.3 109.5
C6 C5 H5 106.1 109.5
C5 C6 O6 110.9 109.5
C5 C6 H61 109.1 109.5
C5 C6 H62 109.1 109.5
O5 C5 H5 107.0 109.5
O6 C6 H61 109.1 109.5
O6 C6 H62 109.1 109.4
C6 O6 HO6 109.5 114.0
H61 C6 H62 109.5 109.4

Torsion Angles for ALL

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O1 C1 C2 O5 121.5 120.0
O1 C1 C2 H1 239.7 240.0
C2 C1 O1 HO1 180.0 180.0
O5 C1 C2 H1 118.2 120.0
C2 C1 O5 C5 299.5 298.8
C3 C2 C1 O2 239.3 240.1
C3 C2 C1 H2 119.0 119.9
C1 C2 C3 C4 302.3 303.0
C1 C2 C3 O3 59.8 62.9
C1 C2 C3 H3 181.2 183.2
O2 C2 C1 H2 239.7 239.8
C1 C2 O2 HO2 180.0 59.9
C2 C1 O1 O5 239.6 240.0
C2 C1 O1 H1 119.3 119.9
O1 C1 C2 C3 179.6 177.6
O1 C1 C2 O2 300.3 297.6
O1 C1 C2 H2 60.7 57.7
O5 C1 O1 H1 239.7 239.9
O1 C1 O5 C5 176.9 178.8
C2 C1 O5 O1 122.6 120.0
C2 C1 O5 H1 243.0 240.1
O5 C1 C2 C3 58.1 57.6
O5 C1 C2 O2 178.8 177.5
O5 C1 C2 H2 299.1 297.7
O1 C1 O5 H1 120.4 120.1
O5 C1 O1 HO1 300.4 299.9
C4 C5 O5 C1 61.5 61.2
C6 C5 O5 C1 191.6 181.1
C1 O5 C5 H5 306.6 301.2
C2 C1 H1 O1 238.1 240.0
C2 C1 H1 O5 117.3 119.9
H1 C1 C2 C3 299.9 297.6
H1 C1 C2 O2 60.7 57.5
H1 C1 C2 H2 181.0 177.7
O1 C1 H1 O5 239.2 239.9
H1 C1 O1 HO1 60.7 60.1
H1 C1 O5 C5 56.5 58.7
C3 C2 C1 O1 179.6 177.6
C3 C2 C1 O5 58.1 57.6
C3 C2 C1 H1 299.9 297.6
C1 C2 C3 O2 120.3 119.9
C1 C2 C3 H2 241.2 240.1
O2 C2 C3 H2 120.9 120.2
C3 C2 O2 HO2 300.8 179.7
C4 C3 C2 O3 242.4 240.1
C4 C3 C2 H3 121.1 119.8
C2 C3 C4 C5 55.9 57.0
C2 C3 C4 O4 174.1 176.9
C2 C3 C4 H4 297.2 297.1
O3 C3 C2 H3 238.6 239.7
C2 C3 O3 HO3 180.0 60.0
O2 C2 C1 O1 300.3 297.6
O2 C2 C1 O5 178.8 177.5
O2 C2 C1 H1 60.7 57.5
C1 C2 O2 C3 239.2 240.3
C1 C2 O2 H2 119.2 120.1
C3 C2 O2 H2 240.0 239.9
O2 C2 C3 C4 182.0 183.1
O2 C2 C3 O3 299.5 303.0
O2 C2 C3 H3 60.9 63.3
H2 C2 C1 O1 60.7 57.7
H2 C2 C1 O5 299.1 297.7
H2 C2 C1 H1 181.0 177.7
C1 C2 H2 C3 119.7 119.7
C1 C2 H2 O2 240.4 239.8
C3 C2 H2 O2 120.7 120.1
H2 C2 C3 C4 61.1 62.9
H2 C2 C3 O3 178.6 182.8
H2 C2 C3 H3 300.0 303.1
H2 C2 O2 HO2 60.8 299.8
C4 C3 C2 O2 182.0 183.1
C4 C3 C2 H2 61.1 62.9
C2 C3 C4 O3 117.1 119.9
C2 C3 C4 H3 238.9 240.1
O3 C3 C4 H3 121.8 120.2
C4 C3 O3 HO3 297.9 179.6
C5 C4 C3 O4 241.8 240.1
C5 C4 C3 H4 118.7 119.9
C3 C4 C5 C6 176.2 182.4
C3 C4 C5 O5 303.2 302.4
C3 C4 C5 H5 59.0 62.4
O4 C4 C3 H4 236.9 239.7
C3 C4 O4 HO4 180.0 60.0
O3 C3 C2 O2 299.5 303.0
O3 C3 C2 H2 178.6 182.8
C2 C3 O3 C4 242.1 240.4
C2 C3 O3 H3 120.9 120.3
C4 C3 O3 H3 238.8 239.9
O3 C3 C4 C5 298.8 297.1
O3 C3 C4 O4 57.0 56.9
O3 C3 C4 H4 180.1 177.2
H3 C3 C2 O2 60.9 63.3
H3 C3 C2 H2 300.0 303.1
C2 C3 H3 C4 120.4 119.6
C2 C3 H3 O3 240.6 239.7
C4 C3 H3 O3 120.2 120.2
H3 C3 C4 C5 177.0 176.9
H3 C3 C4 O4 295.2 296.7
H3 C3 C4 H4 58.3 57.0
H3 C3 O3 HO3 59.1 299.8
C1 O5 C5 C4 61.5 61.2
C5 C4 C3 O3 298.8 297.1
C5 C4 C3 H3 177.0 176.9
C3 C4 C5 O4 121.2 119.9
C3 C4 C5 H4 241.3 240.1
O4 C4 C5 H4 120.1 120.2
C5 C4 O4 HO4 298.6 179.6
C6 C5 C4 O5 232.9 240.0
C6 C5 C4 H5 117.2 120.0
C4 C5 C6 O6 61.6 185.0
C4 C5 C6 H61 181.8 305.0
C4 C5 C6 H62 301.4 65.0
O5 C5 C4 H5 244.3 240.0
O4 C4 C3 O3 57.0 56.9
O4 C4 C3 H3 295.2 296.7
C3 C4 O4 C5 241.4 240.4
C3 C4 O4 H4 122.3 120.2
C5 C4 O4 H4 240.8 239.9
O4 C4 C5 C6 54.9 62.5
O4 C4 C5 O5 182.0 182.5
O4 C4 C5 H5 297.7 302.5
H4 C4 C3 O3 180.1 177.2
H4 C4 C3 H3 58.3 57.0
C3 C4 H4 C5 117.9 119.6
C3 C4 H4 O4 236.0 239.8
C5 C4 H4 O4 118.1 120.1
H4 C4 C5 C6 294.9 302.3
H4 C4 C5 O5 61.9 62.3
H4 C4 C5 H5 177.7 182.3
H4 C4 O4 HO4 57.7 299.8
C1 O5 C5 C6 191.6 181.1
C6 C5 C4 O4 54.9 62.5
C6 C5 C4 H4 294.9 302.3
C4 C5 C6 O5 127.5 119.9
C4 C5 C6 H5 243.0 240.0
O5 C5 C6 H5 115.6 120.1
O6 C6 C5 H61 239.8 240.0
O6 C6 C5 H62 120.2 119.9
C5 C6 O6 HO6 180.0 180.0
H61 C6 C5 H62 240.4 240.0
C5 O5 C1 H1 56.5 58.7
O5 C5 C4 O4 182.0 182.5
O5 C5 C4 H4 61.9 62.3
C4 C5 O5 C6 230.0 240.1
C4 C5 O5 H5 114.9 120.0
C6 C5 O5 H5 245.0 239.9
O5 C5 C6 O6 294.1 65.1
O5 C5 C6 H61 54.3 185.1
O5 C5 C6 H62 173.9 305.1
H5 C5 C4 O4 297.7 302.5
H5 C5 C4 H4 177.7 182.3
C4 C5 H5 C6 123.6 120.0
C4 C5 H5 O5 241.4 240.1
C6 C5 H5 O5 117.8 120.1
H5 C5 C6 O6 178.5 305.0
H5 C5 C6 H61 298.7 65.0
H5 C5 C6 H62 58.3 185.0
O6 C6 C5 O5 294.1 65.1
O6 C6 C5 H5 178.5 305.0
C5 C6 O6 H61 120.2 120.1
C5 C6 O6 H62 239.8 240.0
H61 C6 O6 H62 119.6 119.9
H61 C6 C5 O5 54.3 185.1
H61 C6 C5 H5 298.7 65.0
C5 C6 H61 O6 238.7 240.0
C5 C6 H61 H62 119.4 120.1
O6 C6 H61 H62 240.7 240.1
H61 C6 O6 HO6 59.8 59.9
H62 C6 C5 O5 173.9 305.1
H62 C6 C5 H5 58.3 185.0
C5 C6 H62 O6 121.3 120.0
C5 C6 H62 H61 240.6 239.9
O6 C6 H62 H61 119.4 119.9
H62 C6 O6 HO6 300.2 300.0
HO1 O1 C1 O5 300.4 299.9
HO1 O1 C1 H1 60.7 60.1
HO2 O2 C2 H2 60.8 299.8
HO3 O3 C3 H3 59.1 299.8
HO4 O4 C4 H4 57.7 299.8
HO6 O6 C6 H61 59.8 59.9
HO6 O6 C6 H62 300.2 300.0