PDB Chemical Component ALC
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for ALC
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N |
CA |
1.445 |
1.468 |
N |
H |
1.019 |
1.009 |
N |
H2 |
1.020 |
1.009 |
CA |
C |
1.533 |
1.507 |
CA |
CB |
1.544 |
1.529 |
CA |
HA |
1.115 |
1.090 |
C |
O |
1.244 |
1.207 |
C |
OXT |
1.342 |
1.342 |
CB |
CG |
1.583 |
1.529 |
CB |
HB2 |
1.115 |
1.091 |
CB |
HB3 |
1.115 |
1.090 |
CG |
CD2 |
1.552 |
1.529 |
CG |
CD1 |
1.555 |
1.528 |
CG |
HG |
1.115 |
1.090 |
CD2 |
CE2 |
1.538 |
1.530 |
CD2 |
HD23 |
1.115 |
1.090 |
CD2 |
HD22 |
1.115 |
1.090 |
CE2 |
CZ |
1.538 |
1.529 |
CE2 |
HE23 |
1.115 |
1.089 |
CE2 |
HE22 |
1.115 |
1.090 |
CZ |
CE1 |
1.542 |
1.529 |
CZ |
HZ3 |
1.114 |
1.089 |
CZ |
HZ2 |
1.114 |
1.090 |
CE1 |
CD1 |
1.522 |
1.530 |
CE1 |
HE13 |
1.115 |
1.090 |
CE1 |
HE12 |
1.115 |
1.091 |
CD1 |
HD12 |
1.115 |
1.090 |
CD1 |
HD13 |
1.115 |
1.090 |
OXT |
HXT |
0.951 |
0.967 |
Bond Angles for ALC
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
CA |
N |
H |
114.5 |
106.7 |
CA |
N |
H2 |
110.3 |
106.7 |
N |
CA |
C |
114.5 |
109.4 |
N |
CA |
CB |
111.9 |
109.5 |
N |
CA |
HA |
103.6 |
109.5 |
H |
N |
H2 |
110.4 |
106.6 |
C |
CA |
CB |
107.6 |
109.5 |
C |
CA |
HA |
108.2 |
109.4 |
CA |
C |
O |
124.1 |
120.0 |
CA |
C |
OXT |
115.4 |
120.0 |
CB |
CA |
HA |
111.0 |
109.4 |
CA |
CB |
CG |
111.6 |
109.5 |
CA |
CB |
HB2 |
111.4 |
109.4 |
CA |
CB |
HB3 |
111.4 |
109.5 |
O |
C |
OXT |
120.5 |
120.0 |
C |
OXT |
HXT |
115.5 |
120.0 |
CG |
CB |
HB2 |
111.4 |
109.5 |
CG |
CB |
HB3 |
111.4 |
109.5 |
CB |
CG |
CD2 |
107.7 |
109.5 |
CB |
CG |
CD1 |
106.7 |
109.5 |
CB |
CG |
HG |
111.5 |
109.4 |
HB2 |
CB |
HB3 |
99.0 |
109.4 |
CD2 |
CG |
CD1 |
107.0 |
109.5 |
CD2 |
CG |
HG |
111.3 |
109.5 |
CG |
CD2 |
CE2 |
111.9 |
109.5 |
CG |
CD2 |
HD23 |
111.3 |
109.5 |
CG |
CD2 |
HD22 |
111.3 |
109.5 |
CD1 |
CG |
HG |
112.3 |
109.4 |
CG |
CD1 |
CE1 |
111.6 |
109.5 |
CG |
CD1 |
HD12 |
111.4 |
109.4 |
CG |
CD1 |
HD13 |
111.4 |
109.5 |
CE2 |
CD2 |
HD23 |
111.3 |
109.4 |
CE2 |
CD2 |
HD22 |
111.3 |
109.4 |
CD2 |
CE2 |
CZ |
112.2 |
109.5 |
CD2 |
CE2 |
HE23 |
111.2 |
109.5 |
CD2 |
CE2 |
HE22 |
111.2 |
109.5 |
HD23 |
CD2 |
HD22 |
99.0 |
109.5 |
CZ |
CE2 |
HE23 |
111.3 |
109.5 |
CZ |
CE2 |
HE22 |
111.2 |
109.5 |
CE2 |
CZ |
CE1 |
112.3 |
109.4 |
CE2 |
CZ |
HZ3 |
111.1 |
109.5 |
CE2 |
CZ |
HZ2 |
111.2 |
109.4 |
HE23 |
CE2 |
HE22 |
99.2 |
109.4 |
CE1 |
CZ |
HZ3 |
111.1 |
109.6 |
CE1 |
CZ |
HZ2 |
111.1 |
109.5 |
CZ |
CE1 |
CD1 |
111.6 |
109.5 |
CZ |
CE1 |
HE13 |
111.4 |
109.5 |
CZ |
CE1 |
HE12 |
111.4 |
109.4 |
HZ3 |
CZ |
HZ2 |
99.2 |
109.5 |
CD1 |
CE1 |
HE13 |
111.4 |
109.5 |
CD1 |
CE1 |
HE12 |
111.4 |
109.5 |
CE1 |
CD1 |
HD12 |
111.5 |
109.4 |
CE1 |
CD1 |
HD13 |
111.5 |
109.5 |
HE13 |
CE1 |
HE12 |
99.0 |
109.4 |
HD12 |
CD1 |
HD13 |
98.9 |
109.4 |
Torsion Angles for ALC
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
H |
N |
CA |
H2 |
125.3 |
246.3 |
C |
CA |
N |
CB |
122.8 |
120.0 |
C |
CA |
N |
HA |
242.4 |
240.0 |
N |
CA |
C |
O |
311.1 |
330.0 |
N |
CA |
C |
OXT |
131.3 |
150.0 |
CB |
CA |
N |
HA |
119.7 |
120.0 |
N |
CA |
CB |
CG |
278.9 |
300.0 |
N |
CA |
CB |
HB2 |
44.2 |
60.1 |
N |
CA |
CB |
HB3 |
153.7 |
180.0 |
CA |
N |
H |
H2 |
234.7 |
113.7 |
H |
N |
CA |
C |
180.0 |
60.0 |
H |
N |
CA |
CB |
57.2 |
300.0 |
H |
N |
CA |
HA |
297.6 |
180.0 |
CA |
N |
H2 |
H |
127.6 |
246.3 |
H2 |
N |
CA |
C |
54.7 |
173.7 |
H2 |
N |
CA |
CB |
291.9 |
53.7 |
H2 |
N |
CA |
HA |
172.3 |
293.7 |
C |
CA |
N |
H |
180.0 |
60.0 |
C |
CA |
N |
H2 |
54.7 |
173.7 |
N |
CA |
C |
CB |
234.9 |
240.0 |
N |
CA |
C |
HA |
114.9 |
120.0 |
CB |
CA |
C |
HA |
240.0 |
240.0 |
C |
CA |
CB |
CG |
152.3 |
180.0 |
C |
CA |
CB |
HB2 |
277.6 |
300.1 |
C |
CA |
CB |
HB3 |
27.0 |
60.0 |
O |
C |
CA |
OXT |
179.8 |
179.9 |
CA |
C |
OXT |
HXT |
180.0 |
180.0 |
CB |
CA |
N |
H |
57.2 |
300.0 |
CB |
CA |
N |
H2 |
291.9 |
53.7 |
N |
CA |
CB |
C |
126.6 |
120.0 |
N |
CA |
CB |
HA |
244.8 |
240.0 |
C |
CA |
CB |
HA |
118.2 |
120.0 |
CB |
CA |
C |
O |
76.2 |
90.0 |
CB |
CA |
C |
OXT |
256.4 |
270.0 |
CG |
CB |
CA |
HB2 |
234.7 |
239.9 |
CG |
CB |
CA |
HB3 |
125.3 |
120.0 |
CA |
CB |
CG |
CD2 |
199.5 |
180.0 |
CA |
CB |
CG |
CD1 |
84.9 |
300.1 |
CA |
CB |
CG |
HG |
321.9 |
60.0 |
HB2 |
CB |
CA |
HB3 |
250.6 |
240.1 |
HA |
CA |
N |
H |
297.6 |
180.0 |
HA |
CA |
N |
H2 |
172.3 |
293.7 |
N |
CA |
HA |
C |
238.1 |
240.0 |
N |
CA |
HA |
CB |
120.3 |
120.0 |
C |
CA |
HA |
CB |
242.1 |
240.0 |
HA |
CA |
C |
O |
196.2 |
210.0 |
HA |
CA |
C |
OXT |
16.4 |
30.0 |
HA |
CA |
CB |
CG |
34.1 |
60.0 |
HA |
CA |
CB |
HB2 |
159.4 |
180.1 |
HA |
CA |
CB |
HB3 |
268.8 |
300.0 |
O |
C |
CA |
CB |
76.2 |
90.0 |
O |
C |
CA |
HA |
196.2 |
210.0 |
CA |
C |
O |
OXT |
180.2 |
180.1 |
O |
C |
OXT |
HXT |
0.2 |
0.1 |
OXT |
C |
CA |
CB |
256.4 |
270.0 |
OXT |
C |
CA |
HA |
16.4 |
30.0 |
CA |
C |
OXT |
O |
179.8 |
179.9 |
CG |
CB |
CA |
HA |
34.1 |
60.0 |
CA |
CB |
CG |
HB2 |
125.2 |
120.0 |
CA |
CB |
CG |
HB3 |
234.8 |
240.0 |
HB2 |
CB |
CG |
HB3 |
109.5 |
119.9 |
CD2 |
CG |
CB |
CD1 |
114.6 |
239.9 |
CD2 |
CG |
CB |
HG |
237.5 |
120.0 |
CB |
CG |
CD2 |
CE2 |
186.7 |
180.0 |
CB |
CG |
CD2 |
HD23 |
312.0 |
300.0 |
CB |
CG |
CD2 |
HD22 |
61.4 |
60.1 |
CD1 |
CG |
CB |
HG |
122.9 |
240.1 |
CB |
CG |
CD1 |
CE1 |
175.7 |
180.0 |
CB |
CG |
CD1 |
HD12 |
301.0 |
299.9 |
CB |
CG |
CD1 |
HD13 |
50.4 |
59.9 |
HB2 |
CB |
CA |
HA |
159.4 |
180.1 |
CA |
CB |
HB2 |
CG |
234.6 |
239.9 |
CA |
CB |
HB2 |
HB3 |
117.3 |
119.9 |
CG |
CB |
HB2 |
HB3 |
242.7 |
240.0 |
HB2 |
CB |
CG |
CD2 |
74.2 |
59.9 |
HB2 |
CB |
CG |
CD1 |
319.6 |
180.0 |
HB2 |
CB |
CG |
HG |
196.7 |
300.0 |
HB3 |
CB |
CA |
HA |
268.8 |
300.0 |
CA |
CB |
HB3 |
CG |
125.4 |
120.1 |
CA |
CB |
HB3 |
HB2 |
242.7 |
240.1 |
CG |
CB |
HB3 |
HB2 |
117.4 |
120.0 |
HB3 |
CB |
CG |
CD2 |
324.7 |
300.0 |
HB3 |
CB |
CG |
CD1 |
210.1 |
60.1 |
HB3 |
CB |
CG |
HG |
87.2 |
180.0 |
CD2 |
CG |
CB |
HB2 |
74.2 |
59.9 |
CD2 |
CG |
CB |
HB3 |
324.7 |
300.0 |
CB |
CG |
CD2 |
CD1 |
245.6 |
120.1 |
CB |
CG |
CD2 |
HG |
122.6 |
240.1 |
CD1 |
CG |
CD2 |
HG |
237.0 |
120.0 |
CD2 |
CG |
CD1 |
CE1 |
60.6 |
300.1 |
CD2 |
CG |
CD1 |
HD12 |
185.9 |
60.0 |
CD2 |
CG |
CD1 |
HD13 |
295.3 |
180.0 |
CE2 |
CD2 |
CG |
HD23 |
234.7 |
240.0 |
CE2 |
CD2 |
CG |
HD22 |
125.3 |
120.0 |
CG |
CD2 |
CE2 |
CZ |
54.8 |
300.0 |
CG |
CD2 |
CE2 |
HE23 |
180.1 |
60.1 |
CG |
CD2 |
CE2 |
HE22 |
289.5 |
180.0 |
HD23 |
CD2 |
CG |
HD22 |
250.6 |
239.9 |
CD1 |
CG |
CB |
HB2 |
319.6 |
180.0 |
CD1 |
CG |
CB |
HB3 |
210.1 |
60.1 |
CB |
CG |
CD1 |
CD2 |
115.1 |
239.9 |
CB |
CG |
CD1 |
HG |
237.5 |
119.9 |
CD2 |
CG |
CD1 |
HG |
122.4 |
240.0 |
CD1 |
CG |
CD2 |
CE2 |
301.1 |
60.0 |
CD1 |
CG |
CD2 |
HD23 |
66.4 |
179.9 |
CD1 |
CG |
CD2 |
HD22 |
175.9 |
300.0 |
CZ |
CE1 |
CD1 |
CG |
302.2 |
59.9 |
CG |
CD1 |
CE1 |
HE13 |
176.9 |
299.9 |
CG |
CD1 |
CE1 |
HE12 |
67.5 |
180.0 |
CE1 |
CD1 |
CG |
HD12 |
234.7 |
240.1 |
CE1 |
CD1 |
CG |
HD13 |
125.3 |
120.1 |
HD12 |
CD1 |
CG |
HD13 |
250.6 |
240.0 |
HG |
CG |
CB |
HB2 |
196.7 |
300.0 |
HG |
CG |
CB |
HB3 |
87.2 |
180.0 |
CB |
CG |
HG |
CD2 |
239.6 |
120.0 |
CB |
CG |
HG |
CD1 |
119.7 |
240.0 |
CD2 |
CG |
HG |
CD1 |
240.1 |
120.1 |
HG |
CG |
CD2 |
CE2 |
64.1 |
300.0 |
HG |
CG |
CD2 |
HD23 |
189.4 |
59.9 |
HG |
CG |
CD2 |
HD22 |
298.9 |
180.0 |
HG |
CG |
CD1 |
CE1 |
298.2 |
60.1 |
HG |
CG |
CD1 |
HD12 |
63.5 |
180.0 |
HG |
CG |
CD1 |
HD13 |
172.9 |
300.0 |
CE2 |
CD2 |
CG |
CD1 |
301.1 |
60.0 |
CE2 |
CD2 |
CG |
HG |
64.1 |
300.0 |
CG |
CD2 |
CE2 |
HD23 |
125.3 |
120.0 |
CG |
CD2 |
CE2 |
HD22 |
234.7 |
240.0 |
HD23 |
CD2 |
CE2 |
HD22 |
109.5 |
120.0 |
CZ |
CE2 |
CD2 |
HE23 |
234.7 |
240.0 |
CZ |
CE2 |
CD2 |
HE22 |
125.3 |
120.0 |
CD2 |
CE2 |
CZ |
CE1 |
310.5 |
60.0 |
CD2 |
CE2 |
CZ |
HZ3 |
75.7 |
180.1 |
CD2 |
CE2 |
CZ |
HZ2 |
185.3 |
300.0 |
HE23 |
CE2 |
CD2 |
HE22 |
250.6 |
240.0 |
HD23 |
CD2 |
CG |
CD1 |
66.4 |
179.9 |
HD23 |
CD2 |
CG |
HG |
189.4 |
59.9 |
CG |
CD2 |
HD23 |
CE2 |
234.4 |
240.0 |
CG |
CD2 |
HD23 |
HD22 |
117.2 |
120.0 |
CE2 |
CD2 |
HD23 |
HD22 |
242.8 |
240.0 |
HD23 |
CD2 |
CE2 |
CZ |
289.5 |
180.0 |
HD23 |
CD2 |
CE2 |
HE23 |
54.8 |
300.1 |
HD23 |
CD2 |
CE2 |
HE22 |
164.3 |
60.0 |
HD22 |
CD2 |
CG |
CD1 |
175.9 |
300.0 |
HD22 |
CD2 |
CG |
HG |
298.9 |
180.0 |
CG |
CD2 |
HD22 |
CE2 |
125.6 |
120.0 |
CG |
CD2 |
HD22 |
HD23 |
242.8 |
239.9 |
CE2 |
CD2 |
HD22 |
HD23 |
117.2 |
120.0 |
HD22 |
CD2 |
CE2 |
CZ |
180.1 |
60.0 |
HD22 |
CD2 |
CE2 |
HE23 |
305.3 |
180.0 |
HD22 |
CD2 |
CE2 |
HE22 |
54.8 |
300.0 |
CZ |
CE2 |
CD2 |
HD23 |
289.5 |
180.0 |
CZ |
CE2 |
CD2 |
HD22 |
180.1 |
60.0 |
CD2 |
CE2 |
CZ |
HE23 |
125.3 |
120.0 |
CD2 |
CE2 |
CZ |
HE22 |
234.8 |
240.0 |
HE23 |
CE2 |
CZ |
HE22 |
109.5 |
120.0 |
CE1 |
CZ |
CE2 |
HZ3 |
234.8 |
239.9 |
CE1 |
CZ |
CE2 |
HZ2 |
125.2 |
119.9 |
CE2 |
CZ |
CE1 |
CD1 |
51.1 |
300.0 |
CE2 |
CZ |
CE1 |
HE13 |
176.3 |
60.1 |
CE2 |
CZ |
CE1 |
HE12 |
285.8 |
180.0 |
HZ3 |
CZ |
CE2 |
HZ2 |
250.5 |
240.0 |
HE23 |
CE2 |
CD2 |
HD23 |
54.8 |
300.1 |
HE23 |
CE2 |
CD2 |
HD22 |
305.3 |
180.0 |
CD2 |
CE2 |
HE23 |
CZ |
234.2 |
240.0 |
CD2 |
CE2 |
HE23 |
HE22 |
117.0 |
120.0 |
CZ |
CE2 |
HE23 |
HE22 |
242.9 |
240.0 |
HE23 |
CE2 |
CZ |
CE1 |
185.2 |
299.9 |
HE23 |
CE2 |
CZ |
HZ3 |
310.5 |
60.0 |
HE23 |
CE2 |
CZ |
HZ2 |
60.0 |
180.0 |
HE22 |
CE2 |
CD2 |
HD23 |
164.3 |
60.0 |
HE22 |
CE2 |
CD2 |
HD22 |
54.8 |
300.0 |
CD2 |
CE2 |
HE22 |
CZ |
125.8 |
120.0 |
CD2 |
CE2 |
HE22 |
HE23 |
243.0 |
240.0 |
CZ |
CE2 |
HE22 |
HE23 |
117.2 |
120.0 |
HE22 |
CE2 |
CZ |
CE1 |
75.7 |
180.0 |
HE22 |
CE2 |
CZ |
HZ3 |
200.9 |
300.0 |
HE22 |
CE2 |
CZ |
HZ2 |
310.5 |
60.0 |
CG |
CD1 |
CE1 |
CZ |
302.2 |
59.9 |
CE1 |
CZ |
CE2 |
HE23 |
185.2 |
299.9 |
CE1 |
CZ |
CE2 |
HE22 |
75.7 |
180.0 |
CE2 |
CZ |
CE1 |
HZ3 |
125.2 |
120.0 |
CE2 |
CZ |
CE1 |
HZ2 |
234.7 |
240.1 |
HZ3 |
CZ |
CE1 |
HZ2 |
109.5 |
120.1 |
CD1 |
CE1 |
CZ |
HE13 |
234.8 |
240.0 |
CD1 |
CE1 |
CZ |
HE12 |
125.2 |
120.1 |
CZ |
CE1 |
CD1 |
HD12 |
177.0 |
300.0 |
CZ |
CE1 |
CD1 |
HD13 |
67.5 |
180.0 |
HE13 |
CE1 |
CZ |
HE12 |
250.5 |
240.1 |
HZ3 |
CZ |
CE2 |
HE23 |
310.5 |
60.0 |
HZ3 |
CZ |
CE2 |
HE22 |
200.9 |
300.0 |
CE2 |
CZ |
HZ3 |
CE1 |
234.1 |
240.0 |
CE2 |
CZ |
HZ3 |
HZ2 |
117.1 |
119.9 |
CE1 |
CZ |
HZ3 |
HZ2 |
243.0 |
239.9 |
HZ3 |
CZ |
CE1 |
CD1 |
285.8 |
180.0 |
HZ3 |
CZ |
CE1 |
HE13 |
51.1 |
300.1 |
HZ3 |
CZ |
CE1 |
HE12 |
160.6 |
60.0 |
HZ2 |
CZ |
CE2 |
HE23 |
60.0 |
180.0 |
HZ2 |
CZ |
CE2 |
HE22 |
310.5 |
60.0 |
CE2 |
CZ |
HZ2 |
CE1 |
125.9 |
119.9 |
CE2 |
CZ |
HZ2 |
HZ3 |
243.0 |
240.0 |
CE1 |
CZ |
HZ2 |
HZ3 |
117.0 |
120.1 |
HZ2 |
CZ |
CE1 |
CD1 |
176.3 |
60.0 |
HZ2 |
CZ |
CE1 |
HE13 |
301.5 |
180.0 |
HZ2 |
CZ |
CE1 |
HE12 |
51.1 |
299.9 |
CE1 |
CD1 |
CG |
HG |
298.2 |
60.1 |
CG |
CD1 |
CE1 |
HD12 |
125.2 |
119.9 |
CG |
CD1 |
CE1 |
HD13 |
234.8 |
239.9 |
CD1 |
CE1 |
CZ |
HZ3 |
285.8 |
180.0 |
CD1 |
CE1 |
CZ |
HZ2 |
176.3 |
60.0 |
CZ |
CE1 |
CD1 |
HE13 |
125.3 |
120.0 |
CZ |
CE1 |
CD1 |
HE12 |
234.8 |
240.0 |
HE13 |
CE1 |
CD1 |
HE12 |
109.5 |
119.9 |
HD12 |
CD1 |
CE1 |
HD13 |
109.5 |
120.0 |
HE13 |
CE1 |
CZ |
HZ3 |
51.1 |
300.1 |
HE13 |
CE1 |
CZ |
HZ2 |
301.5 |
180.0 |
CZ |
CE1 |
HE13 |
CD1 |
234.6 |
239.9 |
CZ |
CE1 |
HE13 |
HE12 |
117.4 |
119.9 |
CD1 |
CE1 |
HE13 |
HE12 |
242.7 |
240.0 |
HE13 |
CE1 |
CD1 |
HD12 |
51.7 |
180.0 |
HE13 |
CE1 |
CD1 |
HD13 |
302.2 |
60.0 |
HE12 |
CE1 |
CZ |
HZ3 |
160.6 |
60.0 |
HE12 |
CE1 |
CZ |
HZ2 |
51.1 |
299.9 |
CZ |
CE1 |
HE12 |
CD1 |
125.4 |
120.1 |
CZ |
CE1 |
HE12 |
HE13 |
242.6 |
240.1 |
CD1 |
CE1 |
HE12 |
HE13 |
117.3 |
120.0 |
HE12 |
CE1 |
CD1 |
HD12 |
302.2 |
60.0 |
HE12 |
CE1 |
CD1 |
HD13 |
192.7 |
300.1 |
HD12 |
CD1 |
CG |
HG |
63.5 |
180.0 |
CG |
CD1 |
HD12 |
CE1 |
234.6 |
240.0 |
CG |
CD1 |
HD12 |
HD13 |
117.3 |
120.0 |
HD12 |
CD1 |
CE1 |
HE13 |
51.7 |
180.0 |
HD12 |
CD1 |
CE1 |
HE12 |
302.2 |
60.0 |
CE1 |
CD1 |
HD12 |
HD13 |
242.6 |
240.0 |
HD13 |
CD1 |
CG |
HG |
172.9 |
300.0 |
CG |
CD1 |
HD13 |
CE1 |
125.4 |
120.1 |
CG |
CD1 |
HD13 |
HD12 |
242.7 |
240.0 |
HD13 |
CD1 |
CE1 |
HE13 |
302.2 |
60.0 |
HD13 |
CD1 |
CE1 |
HE12 |
192.7 |
300.1 |
CE1 |
CD1 |
HD13 |
HD12 |
117.4 |
119.9 |