PDB Chemical Component AL8

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for AL8

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C3 S1 1.691 1.762
C3 S2 1.708 1.787
C3 C4 1.351 1.352
C9 C10 1.530 1.519
C9 N8 1.460 1.475
C9 H91 1.115 1.090
C9 H92 1.116 1.090
C10 C5 1.520 1.521
C10 N15 1.455 1.469
C10 H10 1.116 1.090
C16 N15 1.461 1.468
C16 H161 1.116 1.089
C16 H162 1.115 1.090
C16 H163 1.115 1.091
C19 C20 1.386 1.382
C19 C18 1.391 1.382
C19 H19 1.103 1.080
C20 C21 1.408 1.387
C20 H20 1.103 1.080
C21 C22 1.374 1.386
C21 O23 1.302 1.359
C22 C17 1.382 1.386
C22 H22 1.102 1.081
C24 O23 1.451 1.429
C24 H241 1.115 1.089
C24 H242 1.115 1.090
C24 H243 1.114 1.090
N21 S1 1.480 1.656
N21 HNL1 1.019 0.970
N21 HNL2 1.021 0.969
S1 O1A 1.415 1.420
S1 O2A 1.434 1.422
S2 C6 1.706 1.763
C6 C5 1.405 1.360
C6 S7 1.718 1.755
C5 C4 1.354 1.399
C4 H4 1.103 1.080
N8 S7 1.541 1.678
N8 C17 1.340 1.397
S7 O3B 1.504 1.420
S7 O4B 1.486 1.421
N15 HNF 1.020 1.009
C17 C18 1.399 1.390
C18 H18 1.104 1.079

Bond Angles for AL8

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
S1 C3 S2 120.0 129.0
S1 C3 C4 122.6 129.1
C3 S1 N21 109.0 107.4
C3 S1 O1A 107.9 105.8
C3 S1 O2A 100.6 105.8
S2 C3 C4 117.3 101.9
C3 S2 C6 87.6 97.4
C3 C4 C5 109.0 120.3
C3 C4 H4 125.4 119.8
C10 C9 N8 111.7 111.4
C10 C9 H91 111.4 109.1
C10 C9 H92 111.4 109.1
C9 C10 C5 110.3 112.4
C9 C10 N15 111.4 108.9
C9 C10 H10 108.7 108.9
N8 C9 H91 111.4 109.1
N8 C9 H92 111.4 109.1
C9 N8 S7 119.5 115.0
C9 N8 C17 111.2 122.5
H91 C9 H92 99.0 109.0
C5 C10 N15 112.5 108.9
C5 C10 H10 107.5 108.8
C10 C5 C6 120.2 121.3
C10 C5 C4 125.9 123.1
N15 C10 H10 106.2 108.8
C10 N15 C16 90.3 106.7
C10 N15 HNF 119.9 106.6
N15 C16 H161 90.3 109.5
N15 C16 H162 119.9 109.5
N15 C16 H163 119.9 109.5
C16 N15 HNF 119.9 106.7
H161 C16 H162 119.8 109.4
H161 C16 H163 119.8 109.4
H162 C16 H163 90.2 109.4
C20 C19 C18 119.5 120.1
C20 C19 H19 120.1 119.9
C19 C20 C21 119.3 120.1
C19 C20 H20 119.6 120.0
C18 C19 H19 120.4 119.9
C19 C18 C17 119.7 120.0
C19 C18 H18 119.9 119.9
C21 C20 H20 121.1 120.0
C20 C21 C22 121.9 120.0
C20 C21 O23 123.7 120.0
C22 C21 O23 114.4 120.0
C21 C22 C17 118.1 119.9
C21 C22 H22 120.7 120.1
C21 O23 C24 117.6 106.8
C17 C22 H22 121.3 120.0
C22 C17 N8 119.2 120.1
C22 C17 C18 121.6 119.9
O23 C24 H241 117.6 109.5
O23 C24 H242 109.3 109.4
O23 C24 H243 109.3 109.4
H241 C24 H242 109.3 109.5
H241 C24 H243 109.3 109.5
H242 C24 H243 100.8 109.4
S1 N21 HNL1 109.0 120.0
S1 N21 HNL2 112.4 120.0
N21 S1 O1A 111.4 105.8
N21 S1 O2A 118.0 105.7
HNL1 N21 HNL2 112.4 120.1
O1A S1 O2A 109.0 125.4
S2 C6 C5 112.2 104.8
S2 C6 S7 126.0 129.9
C5 C6 S7 121.2 125.4
C6 C5 C4 113.8 115.5
C6 S7 N8 108.8 102.7
C6 S7 O3B 109.2 106.4
C6 S7 O4B 108.0 106.6
C5 C4 H4 125.5 119.9
S7 N8 C17 117.9 122.5
N8 S7 O3B 117.8 106.4
N8 S7 O4B 108.8 106.5
N8 C17 C18 119.3 120.0
O3B S7 O4B 103.8 126.0
C17 C18 H18 120.4 120.1

Torsion Angles for AL8

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
S2 C3 S1 C4 180.2 180.0
S1 C3 S2 C6 178.9 180.2
S1 C3 C4 C5 180.7 180.1
S1 C3 C4 H4 0.8 0.2
C3 S1 N21 HNL1 180.0 180.0
C3 S1 N21 HNL2 54.7 0.1
N21 S1 C3 O1A 238.8 247.4
N21 S1 C3 O2A 124.7 112.5
O1A S1 C3 O2A 245.9 225.2
S1 C3 S2 C4 179.8 180.0
S2 C3 S1 N21 149.6 270.0
S2 C3 S1 O1A 270.7 22.6
S2 C3 S1 O2A 24.9 157.4
S2 C3 C4 C5 0.5 0.2
S2 C3 C4 H4 180.5 180.2
C3 S2 C6 C5 0.9 359.6
C3 S2 C6 S7 189.7 179.3
S1 C3 C4 S2 180.2 180.0
C4 C3 S1 N21 329.3 90.0
C4 C3 S1 O1A 90.5 202.6
C4 C3 S1 O2A 204.6 337.5
C4 C3 S2 C6 359.1 0.1
C10 C5 C4 C3 176.6 178.3
C6 C5 C4 C3 0.3 359.5
C5 C4 C3 H4 180.0 180.0
N8 C9 C10 H91 234.7 239.5
N8 C9 C10 H92 125.3 120.5
C10 C9 N8 S7 55.3 294.3
C10 C9 N8 C17 198.0 114.3
H91 C9 C10 H92 250.5 241.0
C5 C10 C9 N15 234.4 239.2
C5 C10 C9 H10 117.6 120.7
C9 C10 C5 C6 36.8 333.8
C9 C10 C5 C4 220.6 155.0
N15 C10 C9 H10 243.3 241.5
C9 C10 N15 C16 87.7 87.4
C9 C10 N15 HNF 322.5 333.6
C10 C9 N8 H91 125.3 120.5
C10 C9 N8 H92 234.8 239.5
N8 C9 C10 C5 299.2 57.9
N8 C9 C10 N15 64.8 178.7
N8 C9 C10 H10 181.5 297.2
H91 C9 N8 H92 109.5 119.0
C22 C17 N8 C9 303.7 299.3
C6 S7 N8 C9 338.1 36.9
S7 N8 C9 C17 217.2 180.0
C9 N8 S7 O3B 213.2 148.6
C9 N8 S7 O4B 95.5 285.1
C9 N8 C17 C18 123.1 119.5
C10 C9 H91 N8 234.6 238.1
C10 C9 H91 H92 117.3 119.1
H91 C9 C10 C5 64.5 178.4
H91 C9 C10 N15 190.1 299.2
H91 C9 C10 H10 306.8 57.7
N8 C9 H91 H92 242.7 241.0
H91 C9 N8 S7 290.0 173.7
H91 C9 N8 C17 72.8 353.8
C10 C9 H92 N8 125.4 121.9
C10 C9 H92 H91 242.7 240.9
H92 C9 C10 C5 173.9 297.4
H92 C9 C10 N15 299.6 58.2
H92 C9 C10 H10 56.3 176.7
N8 C9 H92 H91 117.4 119.0
H92 C9 N8 S7 180.5 54.7
H92 C9 N8 C17 323.3 234.8
C3 C4 C5 C10 176.6 178.3
C5 C10 C9 N8 299.2 57.9
C5 C10 C9 H91 64.5 178.4
C5 C10 C9 H92 173.9 297.4
C9 C10 C5 N15 125.0 120.8
C9 C10 C5 H10 241.6 239.3
N15 C10 C5 H10 116.6 118.5
C5 C10 N15 C16 212.1 210.3
C5 C10 N15 HNF 86.8 96.5
S2 C6 C5 C10 182.5 181.7
C10 C5 C6 S7 354.2 1.9
C6 C5 C10 C4 176.2 178.8
C10 C5 C4 H4 356.6 358.3
N15 C10 C9 N8 64.8 178.7
N15 C10 C9 H91 190.1 299.2
N15 C10 C9 H92 299.6 58.2
C9 C10 N15 C5 235.6 237.1
C9 C10 N15 H10 118.2 118.6
C5 C10 N15 H10 242.6 241.5
N15 C10 C5 C6 271.8 213.1
N15 C10 C5 C4 95.6 34.3
C10 N15 C16 H161 180.0 176.2
C10 N15 C16 H162 305.2 296.2
C10 N15 C16 H163 54.8 56.2
C16 N15 C10 HNF 125.3 113.8
H10 C10 C9 N8 181.5 297.2
H10 C10 C9 H91 306.8 57.7
H10 C10 C9 H92 56.3 176.7
C9 C10 H10 C5 119.4 122.9
C9 C10 H10 N15 240.0 241.5
C5 C10 H10 N15 120.7 118.6
H10 C10 C5 C6 155.2 94.6
H10 C10 C5 C4 339.0 275.8
H10 C10 N15 C16 329.5 328.8
H10 C10 N15 HNF 204.2 215.0
C16 N15 C10 H10 329.5 328.8
C10 N15 C16 HNF 234.7 246.3
H161 C16 N15 H162 234.7 240.0
H161 C16 N15 H163 125.2 120.0
H162 C16 N15 H163 250.4 240.0
N15 C16 H161 H162 125.3 120.0
N15 C16 H161 H163 234.7 239.9
H161 C16 N15 HNF 305.2 289.9
H162 C16 H161 H163 109.4 119.9
N15 C16 H162 H161 250.3 240.0
N15 C16 H162 H163 125.2 120.0
H162 C16 N15 HNF 70.5 49.9
H161 C16 H162 H163 235.0 240.1
N15 C16 H163 H161 109.7 120.1
N15 C16 H163 H162 234.8 240.0
H163 C16 N15 HNF 180.1 169.9
H161 C16 H163 H162 125.1 119.9
C18 C19 C20 H19 180.0 179.9
C20 C19 C18 C17 0.0 0.1
C20 C19 C18 H18 180.1 180.0
C21 C20 C19 H20 180.0 180.0
C19 C20 C21 C22 359.8 359.8
C19 C20 C21 O23 179.7 180.0
C20 C19 C18 H19 180.0 180.1
C18 C19 C20 C21 0.1 359.9
C18 C19 C20 H20 180.1 179.9
C22 C17 C18 C19 359.9 0.3
N8 C17 C18 C19 180.5 180.0
C17 C18 C19 H18 179.9 180.0
C20 C19 H19 C18 180.0 179.9
H19 C19 C20 C21 180.1 180.0
H19 C19 C20 H20 0.1 360.0
H19 C19 C18 C17 180.0 180.0
H19 C19 C18 H18 0.1 359.9
C21 C20 C19 C18 0.1 359.9
C21 C20 C19 H19 180.1 180.0
C19 C20 C21 H20 180.0 180.0
C22 C21 C20 O23 180.1 179.8
C20 C21 C22 C17 0.2 0.5
C20 C21 C22 H22 180.1 180.0
C20 C21 O23 C24 0.1 0.1
H20 C20 C19 C18 180.1 179.9
H20 C20 C19 H19 0.1 360.0
C19 C20 H20 C21 180.0 180.0
H20 C20 C21 C22 179.8 179.8
H20 C20 C21 O23 359.7 0.0
C22 C21 C20 H20 179.8 179.8
C20 C21 C22 O23 179.9 180.2
C22 C21 O23 C24 180.0 180.3
C17 C22 C21 H22 180.1 180.5
C21 C22 C17 N8 179.4 179.7
C21 C22 C17 C18 360.0 359.4
O23 C21 C20 H20 359.7 0.0
C20 C21 O23 C22 180.1 179.8
O23 C21 C22 C17 180.3 180.3
O23 C21 C22 H22 0.2 359.8
C21 O23 C24 H241 180.1 180.0
C21 O23 C24 H242 305.3 300.0
C21 O23 C24 H243 54.7 59.9
C9 N8 C17 C22 303.7 299.3
C19 C18 C17 C22 359.9 0.3
C17 C22 C21 O23 180.3 180.3
C21 C22 C17 H22 179.9 179.5
S7 N8 C17 C22 87.1 119.3
N8 C17 C22 C18 179.4 180.2
C22 C17 C18 H18 179.9 180.3
H22 C22 C21 O23 0.2 359.8
C21 C22 H22 C17 180.1 180.5
H22 C22 C17 N8 359.5 0.2
H22 C22 C17 C18 180.0 180.0
H241 C24 O23 H242 234.8 240.0
H241 C24 O23 H243 125.3 120.1
H242 C24 O23 H243 250.6 240.1
O23 C24 H241 H242 125.2 120.0
O23 C24 H241 H243 234.7 240.0
H242 C24 H241 H243 109.4 120.0
O23 C24 H242 H241 230.1 240.0
O23 C24 H242 H243 115.0 119.9
H241 C24 H242 H243 244.9 239.9
O23 C24 H243 H241 130.0 120.0
O23 C24 H243 H242 245.0 240.1
H241 C24 H243 H242 115.0 120.0
N21 S1 C3 S2 149.6 270.0
N21 S1 C3 C4 329.3 90.0
C3 S1 N21 O1A 119.0 112.6
C3 S1 N21 O2A 246.2 247.4
HNL1 N21 S1 HNL2 125.2 180.0
O1A S1 N21 O2A 127.2 134.8
S1 N21 HNL1 HNL2 234.7 180.0
HNL1 N21 S1 O1A 61.0 67.4
HNL1 N21 S1 O2A 293.8 292.6
S1 N21 HNL2 HNL1 123.4 180.0
HNL2 N21 S1 O1A 295.7 247.4
HNL2 N21 S1 O2A 168.5 112.6
O1A S1 C3 S2 270.7 22.6
O1A S1 C3 C4 90.5 202.6
C3 S1 O1A N21 240.4 246.3
C3 S1 O1A O2A 108.4 123.2
O1A S1 N21 HNL1 61.0 67.4
O1A S1 N21 HNL2 295.7 247.4
N21 S1 O1A O2A 228.0 236.9
O2A S1 C3 S2 24.9 157.4
O2A S1 C3 C4 204.6 337.5
C3 S1 O2A N21 118.3 113.7
C3 S1 O2A O1A 246.7 236.8
O2A S1 N21 HNL1 293.8 292.6
O2A S1 N21 HNL2 168.5 112.6
N21 S1 O2A O1A 128.4 123.1
C6 S2 C3 C4 359.1 0.1
C10 C5 C6 S2 182.5 181.7
C5 C6 S2 S7 171.2 180.3
S2 C6 C5 C4 359.1 0.6
S2 C6 S7 N8 167.2 174.3
S2 C6 S7 O3B 297.0 62.6
S2 C6 S7 O4B 49.3 286.0
C3 C4 C5 C6 0.3 359.5
C6 C5 C10 N15 271.8 213.1
C6 C5 C10 H10 155.2 94.6
C10 C5 C6 C4 183.4 181.1
S2 C6 C5 S7 188.3 179.7
C5 C6 S7 N8 356.7 353.9
C5 C6 S7 O3B 126.5 242.3
C5 C6 S7 O4B 238.8 105.7
C6 C5 C4 H4 180.2 179.4
C9 N8 S7 C6 338.1 36.9
S2 C6 S7 C5 170.5 180.3
S7 C6 C5 C4 170.8 180.8
C6 S7 N8 C17 197.8 216.9
N8 S7 C6 O3B 230.2 111.7
N8 S7 C6 O4B 117.9 248.3
O3B S7 C6 O4B 247.7 136.6
C3 C4 C5 H4 180.0 180.0
C4 C5 C10 N15 95.6 34.3
C4 C5 C10 H10 339.0 275.8
C10 C5 C4 C6 176.4 178.9
C4 C5 C6 S7 170.8 180.8
C3 C4 H4 C5 180.0 180.0
S7 N8 C9 H91 290.0 173.7
S7 N8 C9 H92 180.5 54.7
C9 N8 S7 C17 140.3 180.0
C22 C17 N8 S7 87.1 119.3
C6 S7 N8 O3B 124.9 248.3
C6 S7 N8 O4B 242.6 111.8
S7 N8 C17 C18 266.5 299.5
O3B S7 N8 O4B 117.7 223.5
C17 N8 C9 H91 72.8 353.8
C17 N8 C9 H92 323.3 234.8
C9 N8 C17 S7 216.6 180.0
C19 C18 C17 N8 180.5 180.0
N8 C17 C22 H22 359.5 0.2
C22 C17 N8 C18 180.6 179.8
C17 N8 S7 O3B 72.9 328.5
C17 N8 S7 O4B 315.2 105.1
N8 C17 C18 H18 0.4 0.1
C6 S7 O3B N8 235.3 109.0
C6 S7 O3B O4B 115.0 234.4
O3B S7 N8 C17 72.9 328.5
N8 S7 O3B O4B 239.7 125.4
C6 S7 O4B N8 117.9 250.9
C6 S7 O4B O3B 244.1 125.5
O4B S7 N8 C17 315.2 105.1
N8 S7 O4B O3B 126.2 234.6
HNF N15 C10 H10 204.2 215.0
C10 N15 HNF C16 109.7 113.8
HNF N15 C16 H161 305.2 289.9
HNF N15 C16 H162 70.5 49.9
HNF N15 C16 H163 180.1 169.9
C17 C18 C19 H19 180.0 180.0
C19 C18 C17 H18 180.1 180.0
C18 C17 C22 H22 180.0 180.0
C22 C17 C18 N8 179.4 180.2
H18 C18 C19 H19 0.1 359.9
C19 C18 H18 C17 179.9 180.0