PDB Chemical Component AL6

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for AL6

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C3 S1 1.710 1.762
C3 C4 1.375 1.354
C3 S2 1.705 1.788
O5 C15 1.306 1.359
O5 C17 1.449 1.428
C9 C10 1.386 1.322
C9 N8 1.413 1.390
C9 H9 1.104 1.080
C10 C5 1.389 1.491
C10 H10 1.104 1.080
C11 C12 1.407 1.390
C11 C16 1.391 1.387
C11 N8 1.341 1.397
C12 C13 1.392 1.381
C12 H12 1.104 1.080
C13 C14 1.393 1.382
C13 H13 1.103 1.081
C14 C15 1.420 1.387
C14 H14 1.102 1.080
C15 C16 1.392 1.386
C16 H16 1.103 1.080
O1A S1 1.392 1.420
O2A S1 1.411 1.421
N21 S1 1.592 1.656
N21 HNL1 1.020 0.970
N21 HNL2 1.020 0.969
C4 C5 1.373 1.399
C4 H4 1.104 1.080
C5 C6 1.380 1.381
C6 S2 1.681 1.756
C6 S7 1.707 1.748
S7 O3B 1.404 1.420
S7 O4B 1.433 1.421
S7 N8 1.511 1.675
C17 H171 1.114 1.090
C17 H172 1.115 1.090
C17 H173 1.114 1.091

Bond Angles for AL6

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
S1 C3 C4 125.1 128.8
S1 C3 S2 121.9 128.9
C3 S1 O1A 104.2 105.8
C3 S1 O2A 107.1 105.8
C3 S1 N21 112.6 107.3
C4 C3 S2 113.0 102.3
C3 C4 C5 110.4 120.1
C3 C4 H4 124.9 120.0
C3 S2 C6 90.9 97.7
C15 O5 C17 118.2 106.8
O5 C15 C14 123.6 120.0
O5 C15 C16 115.2 120.0
O5 C17 H171 118.2 109.5
O5 C17 H172 109.0 109.5
O5 C17 H173 109.0 109.5
C10 C9 N8 127.3 126.2
C10 C9 H9 115.3 116.9
C9 C10 C5 121.4 122.9
C9 C10 H10 119.2 118.5
N8 C9 H9 117.5 116.9
C9 N8 C11 112.4 121.1
C9 N8 S7 117.8 117.7
C5 C10 H10 119.4 118.6
C10 C5 C4 124.7 126.6
C10 C5 C6 121.2 118.1
C12 C11 C16 121.2 119.9
C12 C11 N8 116.8 120.0
C11 C12 C13 120.2 120.0
C11 C12 H12 120.4 120.0
C16 C11 N8 121.9 120.1
C11 C16 C15 118.3 119.9
C11 C16 H16 120.8 120.1
C11 N8 S7 125.9 121.2
C13 C12 H12 119.4 120.0
C12 C13 C14 119.6 120.2
C12 C13 H13 120.1 119.9
C14 C13 H13 120.2 119.9
C13 C14 C15 119.5 120.1
C13 C14 H14 119.3 119.9
C15 C14 H14 121.2 120.0
C14 C15 C16 121.2 120.0
C15 C16 H16 120.9 120.0
O1A S1 O2A 112.2 125.4
O1A S1 N21 108.9 105.8
O2A S1 N21 111.7 105.8
S1 N21 HNL1 112.6 119.9
S1 N21 HNL2 111.0 120.0
HNL1 N21 HNL2 111.1 120.0
C5 C4 H4 124.7 119.9
C4 C5 C6 114.0 115.3
C5 C6 S2 111.6 104.7
C5 C6 S7 119.8 123.2
S2 C6 S7 128.6 132.2
C6 S7 O3B 102.8 106.5
C6 S7 O4B 107.6 106.4
C6 S7 N8 111.5 102.9
O3B S7 O4B 107.6 126.1
O3B S7 N8 103.7 106.5
O4B S7 N8 121.8 106.3
H171 C17 H172 109.1 109.4
H171 C17 H173 109.1 109.4
H172 C17 H173 101.0 109.5

Torsion Angles for AL6

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C4 C3 S1 S2 179.6 180.1
S1 C3 C4 C5 181.5 180.3
S1 C3 C4 H4 1.5 0.3
S1 C3 S2 C6 180.0 180.2
O1A S1 C3 O2A 241.0 225.1
O1A S1 C3 N21 117.8 112.6
O2A S1 C3 N21 236.8 247.4
C3 S1 N21 HNL1 180.0 179.9
C3 S1 N21 HNL2 54.7 0.0
S1 C3 C4 S2 180.4 179.9
C4 C3 S1 O1A 75.3 202.6
C4 C3 S1 O2A 194.3 337.5
C4 C3 S1 N21 317.5 90.0
C4 C3 S2 C6 0.3 0.1
C10 C5 C4 C3 173.4 180.0
C5 C4 C3 H4 180.0 180.0
C3 C4 C5 C6 357.6 359.1
S1 C3 S2 C4 179.6 180.1
S2 C3 S1 O1A 255.8 22.5
S2 C3 S1 O2A 14.8 157.4
S2 C3 S1 N21 137.9 269.9
S2 C3 C4 C5 1.1 0.4
S2 C3 C4 H4 181.1 180.4
C5 C6 S2 C3 358.3 359.5
C3 S2 C6 S7 177.7 179.4
C15 O5 C17 H171 180.0 180.0
C15 O5 C17 H172 305.3 300.0
C15 O5 C17 H173 54.7 60.0
C11 C16 C15 O5 179.4 179.7
C13 C14 C15 O5 180.8 180.0
O5 C15 C14 H14 0.8 0.0
C14 C15 O5 C16 179.5 180.2
O5 C15 C16 H16 359.4 0.2
C17 O5 C15 C14 359.4 360.0
C17 O5 C15 C16 179.9 179.8
H171 C17 O5 H172 234.7 240.0
H171 C17 O5 H173 125.3 120.0
H172 C17 O5 H173 250.6 240.0
N8 C9 C10 H9 180.0 179.9
C10 C9 N8 C11 155.6 151.6
C10 C9 N8 S7 356.5 331.9
C5 C10 C9 H10 180.0 179.9
C9 C10 C5 C4 184.6 191.5
C9 C10 C5 C6 0.1 12.4
C10 C9 N8 H9 180.0 180.1
N8 C9 C10 C5 357.4 2.4
N8 C9 C10 H10 177.4 182.5
C12 C11 N8 C9 128.8 149.9
C16 C11 N8 C9 305.9 330.2
C11 N8 C9 S7 159.1 179.7
C6 S7 N8 C9 9.7 32.7
O3B S7 N8 C9 259.7 144.5
O4B S7 N8 C9 138.5 281.0
C10 C9 H9 N8 180.0 179.9
H9 C9 C10 C5 177.5 182.5
H9 C9 C10 H10 357.5 2.6
H9 C9 N8 C11 335.5 331.5
H9 C9 N8 S7 176.4 151.8
C3 C4 C5 C10 173.4 180.0
C5 C10 C9 N8 357.4 2.4
C5 C10 C9 H9 177.5 182.5
C9 C10 C5 H10 180.0 180.1
C10 C5 C4 H4 353.4 360.0
C4 C5 C10 C6 184.5 179.1
C10 C5 C6 S2 186.7 180.1
C10 C5 C6 S7 7.3 0.1
H10 C10 C9 N8 177.4 182.5
H10 C10 C9 H9 357.5 2.6
C9 C10 H10 C5 180.0 179.9
H10 C10 C5 C4 4.7 11.4
H10 C10 C5 C6 180.1 192.3
C9 N8 C11 C12 128.8 149.9
C16 C11 C12 N8 182.9 179.7
C12 C11 C16 C15 359.6 0.6
C12 C11 C16 H16 179.7 180.1
C12 C11 N8 S7 285.9 329.6
C13 C12 C11 H12 180.0 179.8
C11 C12 C13 C14 359.5 0.1
C11 C12 C13 H13 179.5 180.1
O5 C15 C16 C11 179.4 179.7
C9 N8 C11 C16 305.9 330.2
C12 C11 C16 N8 177.0 180.3
C16 C11 C12 C13 0.6 359.6
C16 C11 C12 H12 180.6 179.8
C16 C11 N8 S7 103.0 149.9
C14 C15 C16 C11 359.9 359.5
C15 C16 C11 H16 180.0 180.4
C11 N8 C9 H9 335.5 331.5
C9 N8 C11 S7 202.9 180.3
C12 C11 N8 C16 182.9 179.7
N8 C11 C12 C13 177.8 179.9
N8 C11 C12 H12 357.7 0.1
N8 C11 C16 C15 182.7 180.3
N8 C11 C16 H16 2.7 359.8
C6 S7 N8 C11 213.7 213.0
O3B S7 N8 C11 103.7 324.8
O4B S7 N8 C11 342.6 101.3
C13 C12 C11 C16 0.6 359.6
C13 C12 C11 N8 177.8 179.9
C11 C12 C13 H12 180.0 180.2
C14 C13 C12 H13 180.0 180.0
C12 C13 C14 C15 0.0 0.0
C12 C13 C14 H14 180.0 179.9
H12 C12 C11 C16 180.6 179.8
H12 C12 C11 N8 357.7 0.1
C11 C12 H12 C13 180.0 179.8
H12 C12 C13 C14 179.6 179.9
H12 C12 C13 H13 359.5 359.9
O5 C15 C14 C13 180.8 180.0
C14 C13 C12 H12 179.6 179.9
C12 C13 C14 H13 180.0 180.0
C15 C14 C13 H14 180.0 180.1
C13 C14 C15 C16 0.3 0.2
H13 C13 C12 H12 359.5 359.9
C12 C13 H13 C14 180.0 180.0
H13 C13 C14 C15 180.0 180.0
H13 C13 C14 H14 360.0 360.0
C14 C15 O5 C17 359.4 360.0
O5 C15 C14 C16 180.5 179.8
C11 C16 C15 C14 359.9 359.5
C15 C14 C13 H13 180.0 180.0
C13 C14 C15 H14 180.0 179.9
C14 C15 C16 H16 179.9 180.0
H14 C14 C13 H13 360.0 360.0
C13 C14 H14 C15 180.0 180.1
H14 C14 C15 C16 180.3 180.2
C16 C15 O5 C17 179.9 179.8
O5 C15 C16 C14 179.5 180.2
C15 C16 C11 N8 182.7 180.3
C11 C16 C15 H16 180.0 179.6
C16 C15 C14 H14 180.3 180.2
H16 C16 C11 N8 2.7 359.8
C11 C16 H16 C15 180.0 180.4
O1A S1 C3 C4 75.3 202.6
O1A S1 C3 S2 255.8 22.5
C3 S1 O1A O2A 115.5 123.2
C3 S1 O1A N21 239.7 246.4
O2A S1 O1A N21 124.2 123.1
O1A S1 N21 HNL1 65.0 67.4
O1A S1 N21 HNL2 299.7 247.4
O2A S1 C3 C4 194.3 337.5
O2A S1 C3 S2 14.8 157.4
C3 S1 O2A O1A 246.3 236.8
C3 S1 O2A N21 123.7 113.7
O1A S1 O2A N21 237.4 236.9
O2A S1 N21 HNL1 300.6 292.6
O2A S1 N21 HNL2 175.2 112.6
N21 S1 C3 C4 317.5 90.0
N21 S1 C3 S2 137.9 269.9
C3 S1 N21 O1A 115.0 112.6
C3 S1 N21 O2A 239.4 247.4
O1A S1 N21 O2A 124.5 134.8
HNL1 N21 S1 HNL2 125.3 179.9
S1 N21 HNL1 HNL2 234.7 180.1
S1 N21 HNL2 HNL1 126.1 179.9
C5 C4 C3 S2 1.1 0.4
C3 C4 C5 H4 180.0 180.0
C4 C5 C10 H10 4.7 11.4
C10 C5 C4 C6 175.8 180.8
C4 C5 C6 S2 2.7 0.8
C4 C5 C6 S7 183.2 180.9
H4 C4 C3 S2 181.1 180.4
C3 C4 H4 C5 180.0 180.0
H4 C4 C5 C6 177.6 179.1
C3 S2 C6 C5 358.3 359.5
C6 C5 C10 H10 180.1 192.3
C10 C5 C6 C4 184.1 179.2
C6 C5 C4 H4 177.6 179.1
S2 C6 C5 S7 179.5 180.0
C5 C6 S7 O3B 98.5 227.9
C5 C6 S7 O4B 212.0 91.3
C5 C6 S7 N8 348.0 339.7
C5 C6 S2 S7 180.6 180.0
S2 C6 S7 O3B 279.2 48.0
S2 C6 S7 O4B 32.6 271.3
S2 C6 S7 N8 168.6 159.7
C9 N8 S7 C6 9.7 32.7
C11 N8 S7 C6 213.7 213.0
C5 C6 S7 S2 179.3 180.0
O3B S7 C6 O4B 246.6 136.6
O3B S7 C6 N8 110.6 248.2
O4B S7 C6 N8 224.0 111.6
C9 N8 S7 O3B 259.7 144.5
C11 N8 S7 O3B 103.7 324.8
C6 S7 O3B O4B 113.4 234.5
C6 S7 O3B N8 243.7 109.3
O4B S7 O3B N8 130.2 234.8
C9 N8 S7 O4B 138.5 281.0
C11 N8 S7 O4B 342.6 101.3
C6 S7 O4B O3B 249.8 125.5
C6 S7 O4B N8 130.5 250.8
O3B S7 O4B N8 240.7 125.3
S7 N8 C9 H9 176.4 151.8
C9 N8 S7 C11 156.0 179.7
C6 S7 N8 O3B 110.0 248.2
C6 S7 N8 O4B 231.2 111.7
O3B S7 N8 O4B 121.1 223.5
O5 C17 H171 H172 125.2 120.1
O5 C17 H171 H173 234.7 240.0
H172 C17 H171 H173 109.5 119.9
O5 C17 H172 H171 229.6 239.9
O5 C17 H172 H173 114.7 120.0
H171 C17 H172 H173 245.2 240.1
O5 C17 H173 H171 130.5 120.0
O5 C17 H173 H172 245.3 239.9
H171 C17 H173 H172 114.8 119.9