PDB Chemical Component AL4

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for AL4

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C3 S1 1.706 1.761
C3 C4 1.366 1.353
C3 S2 1.718 1.788
C9 C10 1.551 1.520
C9 N8 1.457 1.475
C9 H91 1.116 1.090
C9 H92 1.115 1.090
C10 C5 1.539 1.520
C10 N15 1.461 1.468
C10 H10 1.115 1.090
C11 C12 1.516 1.529
C11 N8 1.440 1.466
C11 H111 1.114 1.089
C11 H112 1.115 1.090
C12 O13 1.416 1.428
C12 H121 1.114 1.090
C12 H122 1.116 1.090
C14 O13 1.429 1.429
C14 H141 1.115 1.089
C14 H142 1.115 1.090
C14 H143 1.115 1.090
C16 N15 1.467 1.469
C16 C17 1.535 1.529
C16 H161 1.115 1.090
C16 H162 1.115 1.090
O1A S1 1.424 1.421
O2A S1 1.415 1.421
N21 S1 1.485 1.655
N21 HNL1 1.020 0.970
N21 HNL2 1.021 0.970
C4 C5 1.368 1.399
C4 H4 1.104 1.080
C5 C6 1.391 1.360
C6 S2 1.707 1.763
C6 S7 1.717 1.756
S7 O3B 1.419 1.421
S7 O4B 1.415 1.420
S7 N8 1.496 1.677
N15 HNF 1.020 1.009
C17 H171 1.116 1.089
C17 H172 1.115 1.090
C17 H173 1.115 1.090

Bond Angles for AL4

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
S1 C3 C4 127.7 129.1
S1 C3 S2 119.7 129.0
C3 S1 O1A 109.7 105.8
C3 S1 O2A 103.5 105.8
C3 S1 N21 110.8 107.4
C4 C3 S2 112.6 101.9
C3 C4 C5 114.1 120.4
C3 C4 H4 122.9 119.8
C3 S2 C6 89.1 97.4
C10 C9 N8 105.2 111.5
C10 C9 H91 113.8 109.0
C10 C9 H92 113.8 109.1
C9 C10 C5 115.4 112.4
C9 C10 N15 106.5 108.9
C9 C10 H10 107.9 108.9
N8 C9 H91 113.8 109.1
N8 C9 H92 113.9 109.1
C9 N8 C11 114.6 122.5
C9 N8 S7 116.0 115.0
H91 C9 H92 96.6 109.0
C5 C10 N15 110.7 108.9
C5 C10 H10 103.5 108.9
C10 C5 C4 132.9 123.1
C10 C5 C6 117.0 121.4
N15 C10 H10 112.9 108.8
C10 N15 C16 117.0 106.8
C10 N15 HNF 109.5 106.7
C12 C11 N8 104.7 109.4
C12 C11 H111 114.0 109.5
C12 C11 H112 114.0 109.5
C11 C12 O13 109.8 109.5
C11 C12 H121 112.1 109.5
C11 C12 H122 112.1 109.5
N8 C11 H111 114.0 109.5
N8 C11 H112 114.0 109.5
C11 N8 S7 123.1 122.5
H111 C11 H112 96.5 109.5
O13 C12 H121 112.1 109.5
O13 C12 H122 112.0 109.5
C12 O13 C14 113.4 106.8
H121 C12 H122 98.3 109.4
O13 C14 H141 113.4 109.5
O13 C14 H142 110.7 109.5
O13 C14 H143 110.7 109.4
H141 C14 H142 110.8 109.5
H141 C14 H143 110.8 109.5
H142 C14 H143 99.6 109.5
N15 C16 C17 113.4 109.5
N15 C16 H161 110.8 109.4
N15 C16 H162 110.8 109.4
C16 N15 HNF 109.5 106.7
C17 C16 H161 110.7 109.5
C17 C16 H162 110.7 109.5
C16 C17 H171 113.4 109.6
C16 C17 H172 110.8 109.5
C16 C17 H173 110.8 109.5
H161 C16 H162 99.6 109.5
O1A S1 O2A 110.2 125.3
O1A S1 N21 107.9 105.8
O2A S1 N21 114.6 105.7
S1 N21 HNL1 110.8 120.1
S1 N21 HNL2 111.7 120.0
HNL1 N21 HNL2 111.7 120.0
C5 C4 H4 123.0 119.9
C4 C5 C6 110.1 115.5
C5 C6 S2 114.1 104.9
C5 C6 S7 125.2 125.3
S2 C6 S7 120.5 129.8
C6 S7 O3B 108.5 106.4
C6 S7 O4B 112.1 106.6
C6 S7 N8 100.6 102.7
O3B S7 O4B 107.0 125.9
O3B S7 N8 114.0 106.5
O4B S7 N8 114.5 106.5
H171 C17 H172 110.7 109.4
H171 C17 H173 110.7 109.5
H172 C17 H173 99.5 109.4

Torsion Angles for AL4

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C4 C3 S1 S2 181.0 180.1
S1 C3 C4 C5 178.9 180.1
S1 C3 C4 H4 358.9 0.2
S1 C3 S2 C6 180.1 180.2
O1A S1 C3 O2A 242.4 225.2
O1A S1 C3 N21 119.1 112.6
O2A S1 C3 N21 236.7 247.4
C3 S1 N21 HNL1 180.0 180.0
C3 S1 N21 HNL2 54.7 360.0
S1 C3 C4 S2 179.1 179.9
C4 C3 S1 O1A 87.2 202.7
C4 C3 S1 O2A 204.8 337.5
C4 C3 S1 N21 328.2 90.1
C4 C3 S2 C6 359.3 0.2
C10 C5 C4 C3 183.1 178.3
C5 C4 C3 H4 180.0 179.9
C3 C4 C5 C6 1.3 359.4
S1 C3 S2 C4 180.8 180.1
S2 C3 S1 O1A 266.3 22.6
S2 C3 S1 O2A 23.9 157.4
S2 C3 S1 N21 147.2 270.0
S2 C3 C4 C5 359.8 0.2
S2 C3 C4 H4 179.8 180.3
C5 C6 S2 C3 1.5 359.6
C3 S2 C6 S7 185.4 179.4
N8 C9 C10 H91 234.7 239.5
N8 C9 C10 H92 125.3 120.5
C10 C9 N8 C11 129.3 114.3
C10 C9 N8 S7 282.6 294.3
H91 C9 C10 H92 250.6 241.1
C5 C10 C9 N15 236.6 239.3
C5 C10 C9 H10 115.2 120.7
C9 C10 C5 C4 167.6 155.1
C9 C10 C5 C6 349.6 333.9
N15 C10 C9 H10 238.5 241.5
C9 C10 N15 C16 79.0 86.3
C9 C10 N15 HNF 313.7 332.4
C10 C9 N8 H91 125.3 120.5
C10 C9 N8 H92 234.7 239.5
N8 C9 C10 C5 47.6 57.9
N8 C9 C10 N15 170.9 178.6
N8 C9 C10 H10 292.4 297.2
H91 C9 N8 H92 109.5 119.0
C12 C11 N8 C9 272.1 90.1
C9 N8 C11 H111 146.9 210.1
C9 N8 C11 H112 37.4 330.0
C11 N8 C9 S7 206.7 180.0
C6 S7 N8 C9 56.4 36.8
O3B S7 N8 C9 300.5 148.5
O4B S7 N8 C9 176.9 285.0
C10 C9 H91 N8 239.5 238.0
C10 C9 H91 H92 119.7 119.0
H91 C9 C10 C5 172.9 178.4
H91 C9 C10 N15 296.2 299.2
H91 C9 C10 H10 57.7 57.7
N8 C9 H91 H92 240.2 240.9
H91 C9 N8 C11 4.1 353.8
H91 C9 N8 S7 157.4 173.8
C10 C9 H92 N8 120.6 122.0
C10 C9 H92 H91 240.3 241.0
H92 C9 C10 C5 282.2 297.4
H92 C9 C10 N15 45.6 58.1
H92 C9 C10 H10 167.1 176.6
N8 C9 H92 H91 119.7 119.1
H92 C9 N8 C11 254.6 234.8
H92 C9 N8 S7 47.9 54.8
C3 C4 C5 C10 183.1 178.3
C5 C10 C9 N8 47.6 57.9
C5 C10 C9 H91 172.9 178.4
C5 C10 C9 H92 282.2 297.4
C9 C10 C5 N15 121.1 120.8
C9 C10 C5 H10 242.3 239.3
N15 C10 C5 H10 121.2 118.5
C5 C10 N15 C16 205.2 209.2
C5 C10 N15 HNF 80.0 95.3
C10 C5 C4 H4 3.1 358.2
C4 C5 C10 C6 178.0 181.2
C10 C5 C6 S2 176.6 181.7
C10 C5 C6 S7 352.5 1.9
N15 C10 C9 N8 170.9 178.6
N15 C10 C9 H91 296.2 299.2
N15 C10 C9 H92 45.6 58.1
C9 C10 N15 C5 233.7 237.1
C9 C10 N15 H10 118.3 118.5
C5 C10 N15 H10 244.5 241.4
N15 C10 C5 C4 46.5 34.3
N15 C10 C5 C6 228.5 213.1
C10 N15 C16 C17 177.5 174.9
C10 N15 C16 H161 302.7 54.9
C10 N15 C16 H162 52.2 294.9
C16 N15 C10 HNF 125.3 113.9
H10 C10 C9 N8 292.4 297.2
H10 C10 C9 H91 57.7 57.7
H10 C10 C9 H92 167.1 176.6
C9 C10 H10 C5 122.8 122.9
C9 C10 H10 N15 242.6 241.4
C5 C10 H10 N15 119.7 118.6
H10 C10 C5 C4 285.3 275.8
H10 C10 C5 C6 107.3 94.6
H10 C10 N15 C16 320.7 327.7
H10 C10 N15 HNF 195.4 213.9
C9 N8 C11 C12 272.1 90.1
N8 C11 C12 H111 234.7 120.0
N8 C11 C12 H112 125.2 240.0
C12 C11 N8 S7 121.0 270.0
H111 C11 C12 H112 250.5 120.0
O13 C12 C11 H121 234.7 240.0
O13 C12 C11 H122 125.2 120.1
C11 C12 O13 C14 69.4 180.0
H121 C12 C11 H122 250.5 240.1
C11 N8 C9 H91 4.1 353.8
C11 N8 C9 H92 254.6 234.8
C9 N8 C11 S7 151.1 180.0
C12 C11 N8 H111 125.3 240.0
C12 C11 N8 H112 234.8 120.0
N8 C11 C12 O13 170.3 60.0
N8 C11 C12 H121 295.6 180.0
N8 C11 C12 H122 45.0 299.9
H111 C11 N8 H112 109.5 240.0
C6 S7 N8 C11 207.2 216.9
O3B S7 N8 C11 91.3 328.5
O4B S7 N8 C11 327.6 105.1
C12 C11 H111 N8 239.9 120.0
C12 C11 H111 H112 119.9 239.9
H111 C11 C12 O13 295.5 300.0
H111 C11 C12 H121 60.9 60.1
H111 C11 C12 H122 170.3 180.0
N8 C11 H111 H112 240.1 120.0
H111 C11 N8 S7 355.7 30.0
C12 C11 H112 N8 120.1 240.0
C12 C11 H112 H111 240.0 120.0
H112 C11 C12 O13 45.0 180.0
H112 C11 C12 H121 170.4 300.0
H112 C11 C12 H122 279.8 59.9
N8 C11 H112 H111 119.9 240.0
H112 C11 N8 S7 246.2 150.0
O13 C12 C11 N8 170.3 60.0
O13 C12 C11 H111 295.5 300.0
O13 C12 C11 H112 45.0 180.0
C11 C12 O13 H121 125.3 120.1
C11 C12 O13 H122 234.8 240.0
H121 C12 O13 H122 109.5 119.9
C12 O13 C14 H141 180.0 180.0
C12 O13 C14 H142 305.3 300.0
C12 O13 C14 H143 54.8 60.0
H121 C12 C11 N8 295.6 180.0
H121 C12 C11 H111 60.9 60.1
H121 C12 C11 H112 170.4 300.0
C11 C12 H121 O13 235.9 239.9
C11 C12 H121 H122 118.0 120.0
O13 C12 H121 H122 242.0 240.0
H121 C12 O13 C14 304.1 59.9
H122 C12 C11 N8 45.0 299.9
H122 C12 C11 H111 170.3 180.0
H122 C12 C11 H112 279.8 59.9
C11 C12 H122 O13 124.0 120.1
C11 C12 H122 H121 242.0 240.0
O13 C12 H122 H121 118.0 120.0
H122 C12 O13 C14 194.7 300.0
C14 O13 C12 H121 304.1 59.9
C14 O13 C12 H122 194.7 300.0
H141 C14 O13 H142 234.7 240.0
H141 C14 O13 H143 125.2 120.0
H142 C14 O13 H143 250.5 240.0
O13 C14 H141 H142 125.2 120.0
O13 C14 H141 H143 234.8 240.1
H142 C14 H141 H143 109.6 120.1
O13 C14 H142 H141 233.3 240.0
O13 C14 H142 H143 116.6 120.0
H141 C14 H142 H143 243.3 240.0
O13 C14 H143 H141 126.7 119.9
O13 C14 H143 H142 243.4 240.0
H141 C14 H143 H142 116.7 120.1
C16 N15 C10 H10 320.7 327.7
C10 N15 C16 HNF 234.7 246.1
C17 C16 N15 H161 234.8 120.0
C17 C16 N15 H162 125.2 240.0
N15 C16 C17 H171 180.0 180.0
N15 C16 C17 H172 305.3 300.0
N15 C16 C17 H173 54.7 59.9
H161 C16 N15 H162 250.5 120.0
N15 C16 C17 H161 125.3 240.0
N15 C16 C17 H162 234.8 120.0
C17 C16 N15 HNF 302.7 288.8
H161 C16 C17 H162 109.5 240.0
H171 C17 C16 H172 234.8 240.0
H171 C17 C16 H173 125.3 120.1
H172 C17 C16 H173 250.5 240.1
N15 C16 H161 C17 233.3 120.1
N15 C16 H161 H162 116.7 240.1
H161 C16 N15 HNF 68.0 168.7
C17 C16 H161 H162 243.4 120.0
H161 C16 C17 H171 54.7 300.0
H161 C16 C17 H172 180.0 60.0
H161 C16 C17 H173 289.4 179.9
N15 C16 H162 C17 126.7 240.0
N15 C16 H162 H161 243.3 120.0
H162 C16 N15 HNF 177.5 48.7
C17 C16 H162 H161 116.6 240.0
H162 C16 C17 H171 305.2 60.0
H162 C16 C17 H172 70.5 180.0
H162 C16 C17 H173 180.0 299.9
O1A S1 C3 C4 87.2 202.7
O1A S1 C3 S2 266.3 22.6
C3 S1 O1A O2A 113.3 123.2
C3 S1 O1A N21 239.1 246.2
O2A S1 O1A N21 125.8 123.0
O1A S1 N21 HNL1 59.8 67.3
O1A S1 N21 HNL2 294.6 247.3
O2A S1 C3 C4 204.8 337.5
O2A S1 C3 S2 23.9 157.4
C3 S1 O2A O1A 242.7 236.8
C3 S1 O2A N21 120.8 113.7
O1A S1 O2A N21 238.1 236.9
O2A S1 N21 HNL1 296.7 292.6
O2A S1 N21 HNL2 171.4 112.6
N21 S1 C3 C4 328.2 90.1
N21 S1 C3 S2 147.2 270.0
C3 S1 N21 O1A 120.2 112.7
C3 S1 N21 O2A 243.3 247.4
O1A S1 N21 O2A 123.2 134.7
HNL1 N21 S1 HNL2 125.3 180.0
S1 N21 HNL1 HNL2 234.8 180.0
S1 N21 HNL2 HNL1 124.8 180.0
C5 C4 C3 S2 359.8 0.2
C3 C4 C5 H4 180.0 180.1
C4 C5 C10 N15 46.5 34.3
C4 C5 C10 H10 285.3 275.8
C10 C5 C4 C6 181.9 178.8
C4 C5 C6 S2 358.2 0.6
C4 C5 C6 S7 174.0 180.8
H4 C4 C3 S2 179.8 180.3
C3 C4 H4 C5 180.0 179.9
H4 C4 C5 C6 181.3 179.4
C3 S2 C6 C5 1.5 359.6
C6 C5 C10 N15 228.5 213.1
C6 C5 C10 H10 107.3 94.6
C10 C5 C6 C4 178.5 181.1
C6 C5 C4 H4 181.3 179.4
S2 C6 C5 S7 184.1 179.8
C5 C6 S7 O3B 107.6 242.3
C5 C6 S7 O4B 225.5 105.7
C5 C6 S7 N8 347.7 354.0
C5 C6 S2 S7 176.1 180.2
S2 C6 S7 O3B 283.2 62.5
S2 C6 S7 O4B 41.2 285.9
S2 C6 S7 N8 163.3 174.2
C9 N8 S7 C6 56.4 36.8
C11 N8 S7 C6 207.2 216.9
C5 C6 S7 S2 184.4 179.8
O3B S7 C6 O4B 242.1 136.6
O3B S7 C6 N8 119.9 248.3
O4B S7 C6 N8 237.9 111.7
C9 N8 S7 O3B 300.5 148.5
C11 N8 S7 O3B 91.3 328.5
C6 S7 O3B O4B 121.2 234.5
C6 S7 O3B N8 248.8 109.1
O4B S7 O3B N8 127.6 234.6
C9 N8 S7 O4B 176.9 285.0
C11 N8 S7 O4B 327.6 105.1
C6 S7 O4B O3B 241.2 125.4
C6 S7 O4B N8 113.8 250.9
O3B S7 O4B N8 232.7 125.4
S7 N8 C9 H91 157.4 173.8
S7 N8 C9 H92 47.9 54.8
C9 N8 S7 C11 209.2 180.0
S7 N8 C11 H111 355.7 30.0
S7 N8 C11 H112 246.2 150.0
C6 S7 N8 O3B 115.9 248.3
C6 S7 N8 O4B 239.5 111.8
O3B S7 N8 O4B 123.7 223.5
HNF N15 C10 H10 195.4 213.9
C10 N15 HNF C16 129.5 113.9
HNF N15 C16 C17 302.7 288.8
HNF N15 C16 H161 68.0 168.7
HNF N15 C16 H162 177.5 48.7
H171 C17 C16 H161 54.7 300.0
H171 C17 C16 H162 305.2 60.0
C16 C17 H171 H172 125.3 120.0
C16 C17 H171 H173 234.7 239.9
H172 C17 H171 H173 109.4 119.8
H172 C17 C16 H161 180.0 60.0
H172 C17 C16 H162 70.5 180.0
C16 C17 H172 H171 233.2 239.9
C16 C17 H172 H173 116.6 120.0
H171 C17 H172 H173 243.4 240.1
H173 C17 C16 H161 289.4 179.9
H173 C17 C16 H162 180.0 299.9
C16 C17 H173 H171 126.8 120.1
C16 C17 H173 H172 243.4 240.0
H171 C17 H173 H172 116.6 119.9