PDB Chemical Component AKU

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for AKU

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C10	O1	1.426	1.429
O1	C2	1.370	1.360
O2	C11	1.426	1.429
O2	C3	1.369	1.360
C2	C3	1.409	1.391
C2	C1	1.379	1.383
C3	C4	1.374	1.383
C1	C6	1.403	1.390
C4	C5	1.400	1.389
C6	C5	1.392	1.378
C6	C9	1.508	1.506
C5	C7	1.502	1.509
C9	C8	1.512	1.527
C7	N1	1.466	1.467
C7	C13	1.540	1.530
C8	N1	1.462	1.472
C21	C22	1.379	1.366
C21	C20	1.394	1.389
N1	C12	1.351	1.348
C22	C18	1.401	1.396
C13	C14	1.524	1.530
C12	O3	1.218	1.212
C20	C19	1.374	1.377
C18	C15	1.442	1.465
C18	C17	1.413	1.408
C14	C15	1.500	1.507
C15	C16	1.365	1.342
C19	C17	1.395	1.392
C17	N2	1.370	1.377
C16	N2	1.368	1.368
C4	H1	1.080	1.080
C14	H2	1.100	1.090
C14	H3	1.100	1.089
C11	H4	1.100	1.090
C11	H5	1.100	1.090
C11	H6	1.100	1.090
C7	H7	1.100	1.089
C8	H8	1.100	1.090
C8	H9	1.100	1.090
C9	H10	1.100	1.089
C9	H11	1.100	1.090
C10	H12	1.100	1.090
C10	H13	1.100	1.090
C10	H14	1.100	1.090
C12	H15	1.080	1.080
C13	H16	1.100	1.089
C13	H17	1.100	1.090
N2	H18	1.000	0.971
C1	H19	1.080	1.080
C16	H20	1.080	1.080
C19	H21	1.080	1.080
C20	H22	1.080	1.080
C21	H23	1.080	1.080
C22	H24	1.080	1.080

Bond Angles for AKU

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C10	O1	C2	117.9	117.0
O1	C10	H12	109.5	109.5
O1	C10	H13	109.5	109.5
O1	C10	H14	109.5	109.5
O2	C11	H4	109.5	109.5
O2	C11	H5	109.5	109.5
O2	C11	H6	109.5	109.5
C2	C1	H19	119.5	119.7
C3	C4	H1	119.5	119.8
C4	C5	C7	118.4	117.7
C5	C4	H1	119.5	119.7
C6	C5	C7	122.1	122.3
C6	C9	C8	111.8	110.9
C6	C9	H10	108.9	109.2
C6	C9	H11	108.9	109.2
C5	C7	N1	111.2	109.7
C5	C7	C13	112.7	109.4
C5	C7	H7	106.9	109.4
C9	C8	N1	109.4	107.9
C9	C8	H8	109.5	109.8
C9	C8	H9	109.5	109.8
C13	C7	N1	111.8	109.4
C7	N1	C8	114.0	117.3
C7	N1	C12	121.9	121.3
N1	C7	H7	107.3	109.5
C13	C7	H7	106.5	109.4
C7	C13	H16	110.1	109.5
C7	C13	H17	110.1	109.5
C8	N1	C12	124.1	121.3
N1	C8	H8	109.5	109.7
N1	C8	H9	109.5	109.8
C22	C21	H23	119.4	119.8
C21	C22	H24	120.4	120.1
C21	C20	H22	119.3	119.6
N1	C12	O3	125.4	120.0
N1	C12	H15	117.3	120.0
C13	C14	C15	117.1	109.5
C13	C14	H2	107.5	109.4
C13	C14	H3	107.5	109.5
O3	C12	H15	117.3	120.0
C20	C19	H21	121.3	120.2
C14	C15	C16	126.0	126.4
C15	C14	H2	107.5	109.4
C15	C14	H3	107.6	109.5
C15	C16	H20	124.7	125.1
C17	N2	H18	125.6	125.0
C16	N2	H18	125.5	125.1
H2	C14	H3	109.5	109.5
H4	C11	H5	109.4	109.5
H4	C11	H6	109.4	109.4
H5	C11	H6	109.5	109.5
H8	C8	H9	109.4	109.7
H10	C9	H11	109.5	109.1
H12	C10	H13	109.4	109.5
H12	C10	H14	109.5	109.5
H13	C10	H14	109.5	109.4
H16	C13	H17	109.5	109.5

Torsion Angles for AKU

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
H12	C10	O1	H13	240.0	240.0
H12	C10	O1	H14	120.0	120.0
H13	C10	O1	H14	240.0	240.0
C2	O1	C10	H12	180.0	300.0
C2	O1	C10	H13	300.0	60.1
C2	O1	C10	H14	60.0	180.0
O1	C2	C1	H19	359.5	359.9
H4	C11	O2	H5	240.0	240.0
H4	C11	O2	H6	120.0	120.0
H5	C11	O2	H6	240.0	240.0
C3	O2	C11	H4	180.0	180.0
C3	O2	C11	H5	300.0	300.0
C3	O2	C11	H6	60.0	60.0
O2	C3	C4	H1	0.9	0.1
C10	O1	C2	C3	189.7	180.0
C2	C3	C4	H1	180.1	180.0
C10	O1	C2	C1	9.3	0.5
C5	C4	C3	H1	180.0	179.7
C1	C6	C9	H10	284.6	280.7
C1	C6	C9	H11	43.9	39.9
C3	C4	C5	H1	180.0	180.3
C6	C5	C4	C7	177.6	180.4
C4	C5	C7	N1	165.2	169.1
C4	C5	C7	C13	291.7	289.1
C4	C5	C7	H7	48.3	49.0
C4	C5	C6	C7	182.5	179.6
C6	C5	C4	H1	179.4	179.9
C6	C5	C7	N1	347.7	348.6
C6	C5	C7	C13	114.2	108.7
C6	C5	C7	H7	230.8	228.5
C9	C6	C5	C7	358.4	1.2
C6	C9	C8	N1	47.6	47.5
C6	C9	C8	H8	167.6	167.1
C6	C9	C8	H9	287.6	287.9
H10	C9	C6	H11	240.7	240.7
C7	C5	C4	H1	1.8	359.4
C13	C7	C5	N1	126.5	120.0
C5	C7	N1	C8	46.3	44.3
C5	C7	N1	C12	228.0	224.4
N1	C7	C5	H7	116.9	120.1
C13	C7	C5	H7	243.4	240.1
C5	C7	C13	H16	283.9	55.0
C5	C7	C13	H17	44.7	295.0
C6	C9	C8	H10	120.4	120.4
C6	C9	C8	H11	239.7	239.7
C7	N1	C8	C9	294.4	295.7
C9	C8	N1	C12	112.6	115.7
N1	C8	C9	H8	240.0	240.4
N1	C8	C9	H9	120.0	119.6
H8	C8	C9	H9	240.0	239.2
C5	C7	N1	C13	127.0	120.0
C5	C7	N1	H7	243.4	239.9
C9	C8	N1	C7	294.4	295.7
C13	C7	N1	H7	116.4	119.9
N1	C7	C13	H16	50.0	175.2
N1	C7	C13	H17	170.9	55.2
C8	N1	C7	C12	178.3	179.9
C7	N1	C8	H8	174.4	176.1
C7	N1	C8	H9	54.4	55.4
C7	N1	C12	O3	185.1	180.0
C7	N1	C12	H15	5.0	359.9
C5	C7	C13	N1	233.8	239.8
C5	C7	C13	H7	116.9	119.9
C13	C7	N1	C8	279.3	284.3
C13	C7	N1	C12	101.0	104.4
N1	C7	C13	H7	243.1	240.1
C7	C13	C14	C15	217.8	180.0
C7	C13	C14	H2	338.9	300.0
C7	C13	C14	H3	96.6	60.0
H16	C13	C7	H17	239.2	120.0
C9	C8	N1	H8	120.0	119.6
C9	C8	N1	H9	240.0	240.3
C7	N1	C8	C12	181.8	180.1
C8	N1	C7	H7	162.9	164.4
C8	N1	C12	O3	7.0	0.1
C8	N1	C12	H15	187.0	180.0
H8	C8	N1	H9	120.0	120.7
C22	C21	C20	H22	179.9	179.9
C21	C20	C19	H21	180.1	180.0
C7	N1	C12	C8	178.1	179.9
C12	N1	C7	H7	344.6	344.5
C12	N1	C8	H8	352.7	356.0
C12	N1	C8	H9	232.6	235.3
O3	C12	N1	H15	180.0	180.1
C13	C14	C15	C16	201.4	265.0
C15	C14	C13	H2	238.9	240.1
C15	C14	C13	H3	121.1	120.1
H2	C14	C13	H3	242.2	240.0
N1	C12	O3	H15	180.0	179.9
C18	C15	C14	H2	260.8	325.2
C18	C15	C14	H3	143.0	205.2
C18	C15	C16	H20	179.7	179.9
C18	C17	N2	H18	179.9	180.0
C13	C14	C15	H2	121.1	119.9
C13	C14	C15	H3	238.9	240.0
C14	C15	C16	H20	0.1	359.9
H2	C14	C15	H3	117.8	120.0
C16	C15	C14	H2	80.3	145.1
C16	C15	C14	H3	322.5	25.0
C15	C16	N2	H18	180.3	180.0
C19	C17	N2	H18	359.9	0.0
C16	N2	C17	H18	180.0	179.8
C14	C15	C16	N2	180.1	180.0
C17	N2	C16	H18	180.0	180.2
H1	C4	C5	C7	1.8	359.4
C13	C14	H2	C15	233.1	240.0
C13	C14	H2	H3	116.5	120.0
H2	C14	C15	C16	80.3	145.1
C15	C14	H2	H3	243.4	240.0
C13	C14	H3	C15	126.9	120.0
C13	C14	H3	H2	243.5	240.0
H3	C14	C15	C16	322.5	25.0
C15	C14	H3	H2	116.6	120.0
O2	C11	H4	H5	120.0	120.0
O2	C11	H4	H6	240.0	240.0
H5	C11	H4	H6	119.9	120.0
O2	C11	H5	H4	239.9	240.0
O2	C11	H5	H6	120.0	120.0
H4	C11	H5	H6	240.1	240.0
O2	C11	H6	H4	120.0	120.0
O2	C11	H6	H5	240.0	240.0
H4	C11	H6	H5	119.9	120.0
C5	C7	H7	N1	119.4	120.2
C5	C7	H7	C13	239.3	240.1
C13	C7	H7	N1	240.1	240.1
H7	C7	N1	C8	162.9	164.4
H7	C7	N1	C12	344.6	344.5
H7	C7	C13	H16	167.0	295.2
H7	C7	C13	H17	287.8	175.1
C9	C8	H8	N1	240.1	241.5
C9	C8	H8	H9	120.0	120.8
H8	C8	N1	C12	352.7	356.0
N1	C8	H8	H9	239.9	239.3
C9	C8	H9	N1	119.9	118.5
C9	C8	H9	H8	240.0	239.2
H9	C8	N1	C12	232.6	235.3
N1	C8	H9	H8	120.1	120.7
C6	C9	H10	C8	237.9	238.6
C6	C9	H10	H11	118.9	119.3
H10	C9	C8	N1	287.2	287.1
H10	C9	C8	H8	47.2	46.7
H10	C9	C8	H9	167.2	167.5
C6	C9	H11	C8	122.1	121.4
C6	C9	H11	H10	241.0	240.7
H11	C9	C8	N1	167.9	167.8
H11	C9	C8	H8	287.9	287.4
H11	C9	C8	H9	47.9	48.2
H12	C10	O1	C2	180.0	300.0
O1	C10	H12	H13	120.0	120.0
O1	C10	H12	H14	240.0	240.0
H13	C10	H12	H14	120.0	120.0
H13	C10	O1	C2	300.0	60.1
O1	C10	H13	H12	240.0	240.0
O1	C10	H13	H14	120.0	120.0
H12	C10	H13	H14	240.0	240.0
H14	C10	O1	C2	60.0	180.0
O1	C10	H14	H12	120.0	120.0
O1	C10	H14	H13	240.0	240.0
H12	C10	H14	H13	120.0	120.0
N1	C12	H15	O3	180.0	180.1
H16	C13	C7	N1	50.0	175.2
H16	C13	C7	H7	167.0	295.2
C7	C13	H16	H17	121.2	240.0
H16	C13	C14	C15	98.2	300.1
H16	C13	C14	H2	219.3	60.0
H16	C13	C14	H3	337.1	180.0
H17	C13	C7	N1	170.9	55.2
H17	C13	C7	H7	287.8	175.1
C7	C13	H17	H16	238.8	120.1
H17	C13	C14	C15	337.3	60.1
H17	C13	C14	H2	98.4	180.0
H17	C13	C14	H3	216.2	300.0
H20	C16	N2	H18	0.3	0.0
H22	C20	C19	H21	0.2	360.0
H23	C21	C22	H24	359.9	359.8
H23	C21	C20	H22	360.0	0.0
H24	C22	C21	H23	359.9	359.8