PDB Chemical Component AKO

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for AKO

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C10	O1	1.426	1.429
O1	C2	1.372	1.360
O2	C11	1.426	1.429
O2	C3	1.366	1.359
C2	C3	1.408	1.392
C2	C1	1.377	1.382
C3	C4	1.375	1.384
C1	C6	1.404	1.389
C4	C5	1.401	1.388
C6	C5	1.392	1.378
C6	C9	1.507	1.506
C5	C7	1.501	1.507
C9	C8	1.511	1.528
C7	N1	1.466	1.467
C7	C13	1.539	1.531
C8	N1	1.463	1.472
C21	C22	1.376	1.366
C21	C20	1.396	1.389
N1	C12	1.351	1.348
C22	C18	1.402	1.395
C13	C14	1.523	1.530
C23	C20	1.503	1.507
C12	O3	1.217	1.213
C20	C19	1.386	1.378
C14	C15	1.497	1.506
C18	C15	1.440	1.465
C18	C17	1.412	1.407
C15	C16	1.366	1.343
C19	C17	1.391	1.391
C17	N2	1.374	1.377
C16	N2	1.370	1.368
C4	H1	1.081	1.080
C14	H2	1.100	1.090
C14	H3	1.100	1.090
C11	H4	1.100	1.090
C11	H5	1.100	1.091
C11	H6	1.100	1.090
C7	H7	1.100	1.089
C8	H8	1.100	1.090
C8	H9	1.100	1.090
C9	H10	1.100	1.090
C9	H11	1.100	1.091
C10	H12	1.100	1.090
C10	H13	1.100	1.090
C10	H14	1.100	1.090
C12	H15	1.080	1.080
C13	H16	1.101	1.089
C13	H17	1.100	1.090
N2	H18	1.000	0.971
C1	H19	1.080	1.080
C16	H20	1.080	1.080
C19	H21	1.080	1.080
C21	H22	1.080	1.080
C22	H23	1.080	1.080
C23	H24	1.100	1.090
C23	H25	1.100	1.090
C23	H26	1.100	1.090

Bond Angles for AKO

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C10	O1	C2	118.0	117.0
O1	C10	H12	109.5	109.5
O1	C10	H13	109.4	109.5
O1	C10	H14	109.4	109.4
O2	C11	H4	109.5	109.5
O2	C11	H5	109.5	109.4
O2	C11	H6	109.5	109.4
C2	C1	H19	119.3	119.7
C3	C4	H1	119.5	119.7
C4	C5	C7	118.2	117.7
C5	C4	H1	119.5	119.8
C6	C5	C7	122.3	122.4
C6	C9	C8	112.0	110.9
C6	C9	H10	108.8	109.2
C6	C9	H11	108.9	109.2
C5	C7	N1	111.2	109.7
C5	C7	C13	112.4	109.4
C5	C7	H7	107.0	109.5
C9	C8	N1	109.8	107.9
C9	C8	H8	109.3	109.8
C9	C8	H9	109.3	109.8
C13	C7	N1	112.0	109.4
C7	N1	C8	114.4	117.3
C7	N1	C12	121.3	121.3
N1	C7	H7	107.4	109.4
C13	C7	H7	106.5	109.4
C7	C13	H16	109.6	109.4
C7	C13	H17	109.6	109.5
C8	N1	C12	124.3	121.3
N1	C8	H8	109.4	109.8
N1	C8	H9	109.4	109.8
C22	C21	H22	119.0	119.7
C21	C22	H23	120.4	120.1
N1	C12	O3	125.2	120.0
N1	C12	H15	117.4	120.0
C13	C14	C15	114.5	109.5
C13	C14	H2	108.2	109.5
C13	C14	H3	108.2	109.5
O3	C12	H15	117.4	120.0
C20	C19	H21	121.0	120.1
C14	C15	C16	127.4	126.5
C15	C14	H2	108.2	109.4
C15	C14	H3	108.2	109.5
C15	C16	H20	124.7	125.1
C17	N2	H18	125.6	125.0
C16	N2	H18	125.6	125.1
H2	C14	H3	109.5	109.5
H4	C11	H5	109.4	109.5
H4	C11	H6	109.5	109.5
H5	C11	H6	109.5	109.5
H8	C8	H9	109.5	109.7
H10	C9	H11	109.4	109.1
H12	C10	H13	109.5	109.5
H12	C10	H14	109.5	109.4
H13	C10	H14	109.5	109.5
H16	C13	H17	109.4	109.5
H24	C23	H25	109.4	109.5
H24	C23	H26	109.5	109.5
H25	C23	H26	109.5	109.5

Torsion Angles for AKO

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
H12	C10	O1	H13	240.0	240.0
H12	C10	O1	H14	120.0	119.9
H13	C10	O1	H14	240.0	239.9
C2	O1	C10	H12	180.0	180.0
C2	O1	C10	H13	300.0	300.0
C2	O1	C10	H14	60.0	60.1
O1	C2	C1	H19	359.5	359.9
H4	C11	O2	H5	240.0	240.0
H4	C11	O2	H6	120.0	120.0
H5	C11	O2	H6	240.0	240.1
C3	O2	C11	H4	180.0	180.0
C3	O2	C11	H5	300.0	300.0
C3	O2	C11	H6	60.0	60.0
O2	C3	C4	H1	0.7	0.1
C10	O1	C2	C3	193.5	180.0
C2	C3	C4	H1	179.9	180.1
C10	O1	C2	C1	12.6	0.5
C5	C4	C3	H1	180.0	179.7
C1	C6	C9	H10	284.7	280.7
C1	C6	C9	H11	43.9	39.9
C3	C4	C5	H1	180.0	180.3
C6	C5	C4	C7	178.2	180.4
C4	C5	C7	N1	165.9	169.1
C4	C5	C7	C13	292.4	289.1
C4	C5	C7	H7	49.0	48.9
C4	C5	C6	C7	181.9	179.6
C6	C5	C4	H1	179.5	179.9
C6	C5	C7	N1	347.8	348.7
C6	C5	C7	C13	114.3	108.7
C6	C5	C7	H7	230.9	228.6
C9	C6	C5	C7	358.3	1.2
C6	C9	C8	N1	46.5	47.5
C6	C9	C8	H8	166.5	167.1
C6	C9	C8	H9	286.4	287.9
H10	C9	C6	H11	240.8	240.8
C7	C5	C4	H1	1.3	359.5
C13	C7	C5	N1	126.5	120.0
C5	C7	N1	C8	45.6	44.3
C5	C7	N1	C12	226.2	224.4
N1	C7	C5	H7	117.0	120.1
C13	C7	C5	H7	243.4	240.1
C5	C7	C13	H16	254.6	55.0
C5	C7	C13	H17	14.7	295.0
C6	C9	C8	H10	120.4	120.4
C6	C9	C8	H11	239.6	239.6
C7	N1	C8	C9	295.5	295.8
C9	C8	N1	C12	114.9	115.7
N1	C8	C9	H8	239.9	240.4
N1	C8	C9	H9	120.1	119.6
H8	C8	C9	H9	240.1	239.2
C5	C7	N1	C13	126.7	120.0
C5	C7	N1	H7	243.3	239.9
C9	C8	N1	C7	295.5	295.8
C13	C7	N1	H7	116.6	119.8
N1	C7	C13	H16	20.6	175.2
N1	C7	C13	H17	140.7	55.2
C8	N1	C7	C12	179.4	179.9
C7	N1	C8	H8	175.5	176.1
C7	N1	C8	H9	55.6	55.4
C7	N1	C12	O3	173.1	180.0
C7	N1	C12	H15	353.1	359.9
C5	C7	C13	N1	234.0	239.8
C5	C7	C13	H7	116.8	119.9
C13	C7	N1	C8	278.9	284.3
C13	C7	N1	C12	99.6	104.4
N1	C7	C13	H7	242.8	240.1
C7	C13	C14	C15	185.5	180.0
C7	C13	C14	H2	306.2	300.0
C7	C13	C14	H3	64.7	60.0
H16	C13	C7	H17	239.9	120.0
C9	C8	N1	H8	120.0	119.6
C9	C8	N1	H9	240.0	240.3
C7	N1	C8	C12	180.7	180.1
C8	N1	C7	H7	162.3	164.5
C8	N1	C12	O3	353.8	0.1
C8	N1	C12	H15	173.8	180.0
H8	C8	N1	H9	119.9	120.7
C21	C20	C19	H21	179.7	180.0
C7	N1	C12	C8	179.3	179.9
C12	N1	C7	H7	342.9	344.5
C12	N1	C8	H8	354.8	356.1
C12	N1	C8	H9	234.9	235.4
O3	C12	N1	H15	180.0	180.0
C13	C14	C15	C16	257.1	265.0
C15	C14	C13	H2	239.3	240.0
C15	C14	C13	H3	120.7	120.0
H2	C14	C13	H3	241.5	240.0
C23	C20	C19	H21	0.2	359.9
N1	C12	O3	H15	180.0	180.0
C13	C14	C15	H2	120.7	120.0
C13	C14	C15	H3	239.3	240.0
C14	C15	C16	H20	0.2	0.1
H2	C14	C15	H3	118.5	120.0
C18	C15	C14	H2	316.5	325.2
C18	C15	C14	H3	198.0	205.2
C18	C15	C16	H20	180.0	179.9
C18	C17	N2	H18	180.0	180.0
C16	C15	C14	H2	136.3	145.0
C16	C15	C14	H3	17.8	25.0
C15	C16	N2	H18	179.9	180.0
C19	C17	N2	H18	359.9	360.0
C16	N2	C17	H18	180.0	179.8
C14	C15	C16	N2	180.2	180.0
C17	N2	C16	H18	180.0	180.2
H1	C4	C5	C7	1.3	359.5
C13	C14	H2	C15	235.4	240.0
C13	C14	H2	H3	117.7	120.0
H2	C14	C15	C16	136.3	145.0
C15	C14	H2	H3	242.3	240.0
C13	C14	H3	C15	124.6	120.0
C13	C14	H3	H2	242.3	240.0
H3	C14	C15	C16	17.8	25.0
C15	C14	H3	H2	117.7	120.0
O2	C11	H4	H5	120.0	120.0
O2	C11	H4	H6	240.0	240.0
H5	C11	H4	H6	120.0	120.0
O2	C11	H5	H4	239.9	239.9
O2	C11	H5	H6	120.0	119.9
H4	C11	H5	H6	240.0	240.0
O2	C11	H6	H4	120.0	120.0
O2	C11	H6	H5	240.0	240.1
H4	C11	H6	H5	120.0	120.0
C5	C7	H7	N1	119.4	120.3
C5	C7	H7	C13	239.6	240.1
C13	C7	H7	N1	239.8	240.2
H7	C7	N1	C8	162.3	164.5
H7	C7	N1	C12	342.9	344.5
H7	C7	C13	H16	137.7	295.1
H7	C7	C13	H17	257.9	175.1
C9	C8	H8	N1	239.7	241.5
C9	C8	H8	H9	119.8	120.8
H8	C8	N1	C12	354.8	356.1
N1	C8	H8	H9	240.1	239.3
C9	C8	H9	N1	120.3	118.5
C9	C8	H9	H8	240.2	239.2
H9	C8	N1	C12	234.9	235.4
N1	C8	H9	H8	119.9	120.7
C6	C9	H10	C8	237.7	238.5
C6	C9	H10	H11	118.8	119.3
H10	C9	C8	N1	286.1	287.1
H10	C9	C8	H8	46.2	46.7
H10	C9	C8	H9	166.0	167.4
C6	C9	H11	C8	122.3	121.4
C6	C9	H11	H10	241.2	240.7
H11	C9	C8	N1	166.9	167.8
H11	C9	C8	H8	286.9	287.4
H11	C9	C8	H9	46.8	48.2
H12	C10	O1	C2	180.0	180.0
O1	C10	H12	H13	120.0	120.0
O1	C10	H12	H14	240.0	240.0
H13	C10	H12	H14	120.0	120.0
H13	C10	O1	C2	300.0	300.0
O1	C10	H13	H12	240.0	240.0
O1	C10	H13	H14	120.0	120.0
H12	C10	H13	H14	240.0	240.0
H14	C10	O1	C2	60.0	60.1
O1	C10	H14	H12	120.0	120.0
O1	C10	H14	H13	240.0	240.0
H12	C10	H14	H13	120.0	120.0
N1	C12	H15	O3	180.0	180.0
H16	C13	C7	N1	20.6	175.2
H16	C13	C7	H7	137.7	295.1
C7	C13	H16	H17	120.3	240.0
H16	C13	C14	C15	65.6	300.0
H16	C13	C14	H2	186.3	60.0
H16	C13	C14	H3	304.8	180.0
H17	C13	C7	N1	140.7	55.2
H17	C13	C7	H7	257.9	175.1
C7	C13	H17	H16	239.7	120.0
H17	C13	C14	C15	305.4	60.0
H17	C13	C14	H2	66.2	180.0
H17	C13	C14	H3	184.7	300.0
H20	C16	N2	H18	360.0	359.9
H22	C21	C22	H23	359.9	359.8
H23	C22	C21	H22	359.9	359.8
H25	C23	H24	H26	120.0	120.0
H24	C23	H25	H26	240.0	240.0
H24	C23	H26	H25	120.0	120.0