PDB Chemical Component AKE
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for AKE
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| O29 |
C28 |
1.373 |
1.429 |
| C28 |
C27 |
1.506 |
1.530 |
| C27 |
N26 |
1.430 |
1.469 |
| N26 |
C25 |
1.459 |
1.469 |
| C25 |
C24 |
1.538 |
1.530 |
| C24 |
N23 |
1.445 |
1.465 |
| N23 |
C22 |
1.501 |
1.387 |
| C21 |
C22 |
1.389 |
1.398 |
| C21 |
C20 |
1.475 |
1.365 |
| C22 |
C30 |
1.429 |
1.395 |
| N16 |
C17 |
1.454 |
1.469 |
| N16 |
C15 |
1.480 |
1.469 |
| C20 |
C12 |
1.369 |
1.399 |
| O01 |
C02 |
1.236 |
1.216 |
| C17 |
C18 |
1.458 |
1.530 |
| C30 |
C02 |
1.461 |
1.473 |
| C30 |
C11 |
1.407 |
1.413 |
| C18 |
O19 |
1.388 |
1.428 |
| C02 |
C03 |
1.439 |
1.479 |
| C12 |
C11 |
1.456 |
1.397 |
| C12 |
N13 |
1.466 |
1.387 |
| C14 |
C15 |
1.508 |
1.530 |
| C14 |
N13 |
1.434 |
1.466 |
| C11 |
C09 |
1.414 |
1.472 |
| C03 |
C04 |
1.483 |
1.391 |
| C03 |
C08 |
1.384 |
1.407 |
| C04 |
C05 |
1.387 |
1.384 |
| C09 |
C08 |
1.483 |
1.478 |
| C09 |
O10 |
1.214 |
1.217 |
| C08 |
C07 |
1.420 |
1.391 |
| C05 |
C06 |
1.424 |
1.383 |
| C07 |
C06 |
1.441 |
1.384 |
| C04 |
H1 |
1.080 |
1.080 |
| C05 |
H2 |
1.080 |
1.079 |
| C06 |
H3 |
1.080 |
1.080 |
| C07 |
H4 |
1.080 |
1.080 |
| N13 |
H5 |
1.000 |
0.969 |
| C14 |
H6 |
1.099 |
1.089 |
| C14 |
H7 |
1.100 |
1.090 |
| C15 |
H8 |
1.100 |
1.089 |
| C15 |
H9 |
1.100 |
1.090 |
| N16 |
H10 |
1.000 |
1.010 |
| C17 |
H12 |
1.100 |
1.089 |
| C17 |
H13 |
1.100 |
1.090 |
| C18 |
H14 |
1.100 |
1.090 |
| C18 |
H15 |
1.100 |
1.090 |
| O19 |
H16 |
0.950 |
0.967 |
| C20 |
H17 |
1.080 |
1.080 |
| C21 |
H18 |
1.080 |
1.080 |
| N23 |
H19 |
1.000 |
0.970 |
| C24 |
H20 |
1.100 |
1.091 |
| C24 |
H21 |
1.101 |
1.090 |
| C25 |
H22 |
1.100 |
1.091 |
| C25 |
H23 |
1.100 |
1.090 |
| N26 |
H24 |
1.000 |
1.009 |
| C27 |
H26 |
1.100 |
1.090 |
| C27 |
H27 |
1.100 |
1.090 |
| C28 |
H28 |
1.100 |
1.091 |
| C28 |
H29 |
1.100 |
1.090 |
| O29 |
H30 |
0.950 |
0.967 |
Bond Angles for AKE
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O29 |
C28 |
H28 |
107.7 |
109.5 |
| O29 |
C28 |
H29 |
107.7 |
109.5 |
| C28 |
C27 |
H26 |
107.5 |
109.5 |
| C28 |
C27 |
H27 |
107.5 |
109.5 |
| C27 |
N26 |
H24 |
109.9 |
111.0 |
| N26 |
C25 |
H22 |
107.6 |
109.5 |
| N26 |
C25 |
H23 |
107.6 |
109.5 |
| C25 |
C24 |
H20 |
107.9 |
109.5 |
| C25 |
C24 |
H21 |
107.9 |
109.5 |
| C24 |
N23 |
H19 |
106.5 |
120.0 |
| N23 |
C22 |
C30 |
118.6 |
120.1 |
| C21 |
C22 |
C30 |
119.7 |
119.8 |
| C22 |
C21 |
H18 |
119.9 |
119.7 |
| C21 |
C20 |
H17 |
119.8 |
119.6 |
| N16 |
C17 |
C18 |
118.5 |
109.4 |
| C17 |
N16 |
H10 |
109.3 |
111.0 |
| N16 |
C17 |
H12 |
107.2 |
109.5 |
| N16 |
C17 |
H13 |
107.2 |
109.4 |
| N16 |
C15 |
H8 |
107.5 |
109.5 |
| N16 |
C15 |
H9 |
107.5 |
109.5 |
| O01 |
C02 |
C03 |
119.4 |
120.4 |
| C17 |
C18 |
O19 |
119.3 |
109.5 |
| C18 |
C17 |
H12 |
107.1 |
109.5 |
| C18 |
C17 |
H13 |
107.2 |
109.5 |
| C17 |
C18 |
H14 |
107.0 |
109.4 |
| C17 |
C18 |
H15 |
106.9 |
109.5 |
| O19 |
C18 |
H14 |
106.9 |
109.5 |
| O19 |
C18 |
H15 |
107.0 |
109.5 |
| C18 |
O19 |
H16 |
109.5 |
114.0 |
| C02 |
C03 |
C04 |
119.2 |
120.6 |
| C02 |
C03 |
C08 |
119.9 |
119.7 |
| C12 |
N13 |
H5 |
105.9 |
120.0 |
| C15 |
C14 |
H6 |
108.2 |
109.5 |
| C15 |
C14 |
H7 |
108.1 |
109.5 |
| C14 |
C15 |
H8 |
107.5 |
109.5 |
| C14 |
C15 |
H9 |
107.5 |
109.5 |
| C14 |
N13 |
H5 |
106.0 |
120.0 |
| C04 |
C03 |
C08 |
120.9 |
119.7 |
| C03 |
C04 |
C05 |
120.4 |
119.9 |
| C03 |
C04 |
H1 |
119.8 |
120.1 |
| C03 |
C08 |
C07 |
118.3 |
119.7 |
| C04 |
C05 |
C06 |
118.8 |
120.4 |
| C05 |
C04 |
H1 |
119.8 |
120.1 |
| C04 |
C05 |
H2 |
120.6 |
119.8 |
| C08 |
C07 |
H4 |
119.4 |
120.1 |
| C06 |
C05 |
H2 |
120.6 |
119.8 |
| C05 |
C06 |
H3 |
119.8 |
119.7 |
| C07 |
C06 |
H3 |
119.8 |
119.8 |
| H6 |
C14 |
H7 |
109.5 |
109.5 |
| H8 |
C15 |
H9 |
109.5 |
109.5 |
| H12 |
C17 |
H13 |
109.5 |
109.5 |
| H14 |
C18 |
H15 |
109.5 |
109.5 |
| H20 |
C24 |
H21 |
109.4 |
109.4 |
| H22 |
C25 |
H23 |
109.5 |
109.5 |
| H26 |
C27 |
H27 |
109.4 |
109.5 |
| H28 |
C28 |
H29 |
109.5 |
109.5 |
Torsion Angles for AKE
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O29 |
C28 |
C27 |
H26 |
342.9 |
305.0 |
| O29 |
C28 |
C27 |
H27 |
100.7 |
185.0 |
| H28 |
C28 |
O29 |
H29 |
242.1 |
120.0 |
| C28 |
C27 |
N26 |
H24 |
271.5 |
304.0 |
| H26 |
C27 |
C28 |
H27 |
242.2 |
120.1 |
| C27 |
N26 |
C25 |
H22 |
241.2 |
60.1 |
| C27 |
N26 |
C25 |
H23 |
359.1 |
300.1 |
| N26 |
C25 |
C24 |
H20 |
196.7 |
60.1 |
| N26 |
C25 |
C24 |
H21 |
314.8 |
300.1 |
| H22 |
C25 |
N26 |
H23 |
242.1 |
120.0 |
| C25 |
C24 |
N23 |
H19 |
338.0 |
0.1 |
| H20 |
C24 |
C25 |
H21 |
241.9 |
120.0 |
| C24 |
N23 |
C22 |
C30 |
178.6 |
173.7 |
| C21 |
C22 |
N23 |
C30 |
179.7 |
179.7 |
| N23 |
C22 |
C21 |
H18 |
359.1 |
0.3 |
| N23 |
C22 |
C21 |
C30 |
180.3 |
180.3 |
| C22 |
C21 |
C20 |
H17 |
181.5 |
180.0 |
| C30 |
C22 |
C21 |
H18 |
178.8 |
179.9 |
| C17 |
N16 |
C15 |
H8 |
253.1 |
60.0 |
| C17 |
N16 |
C15 |
H9 |
10.8 |
300.0 |
| N16 |
C17 |
C18 |
O19 |
99.1 |
65.1 |
| C18 |
C17 |
N16 |
H12 |
238.7 |
240.0 |
| C18 |
C17 |
N16 |
H13 |
121.3 |
120.0 |
| N16 |
C17 |
C18 |
H14 |
220.5 |
185.0 |
| N16 |
C17 |
C18 |
H15 |
337.7 |
305.0 |
| H12 |
C17 |
N16 |
H13 |
242.5 |
240.0 |
| N16 |
C15 |
C14 |
H6 |
35.8 |
60.0 |
| N16 |
C15 |
C14 |
H7 |
154.2 |
300.0 |
| C14 |
C15 |
N16 |
H8 |
238.9 |
120.0 |
| C14 |
C15 |
N16 |
H9 |
121.1 |
240.0 |
| H8 |
C15 |
N16 |
H9 |
242.3 |
120.0 |
| C20 |
C12 |
N13 |
H5 |
142.5 |
182.8 |
| O01 |
C02 |
C03 |
C04 |
0.3 |
13.8 |
| O01 |
C02 |
C03 |
C08 |
180.1 |
193.7 |
| C18 |
C17 |
N16 |
H10 |
35.2 |
304.0 |
| N16 |
C17 |
C18 |
H12 |
121.3 |
120.0 |
| N16 |
C17 |
C18 |
H13 |
238.7 |
240.1 |
| O19 |
C18 |
C17 |
H14 |
238.6 |
240.0 |
| O19 |
C18 |
C17 |
H15 |
121.4 |
120.1 |
| C17 |
C18 |
O19 |
H16 |
255.0 |
179.9 |
| H12 |
C17 |
C18 |
H13 |
117.4 |
120.0 |
| H14 |
C18 |
C17 |
H15 |
242.8 |
240.0 |
| O19 |
C18 |
C17 |
H12 |
337.8 |
305.0 |
| O19 |
C18 |
C17 |
H13 |
220.3 |
185.0 |
| C17 |
C18 |
O19 |
H14 |
121.4 |
119.9 |
| C17 |
C18 |
O19 |
H15 |
238.6 |
239.9 |
| H14 |
C18 |
O19 |
H15 |
117.2 |
120.0 |
| C04 |
C03 |
C02 |
C08 |
180.1 |
180.1 |
| C02 |
C03 |
C04 |
C05 |
179.7 |
180.0 |
| C02 |
C03 |
C04 |
H1 |
359.6 |
0.0 |
| C02 |
C03 |
C08 |
C07 |
180.0 |
179.9 |
| C14 |
N13 |
C12 |
H5 |
238.1 |
180.1 |
| N16 |
C15 |
C14 |
H8 |
121.1 |
240.0 |
| N16 |
C15 |
C14 |
H9 |
238.9 |
120.0 |
| C15 |
C14 |
N13 |
H5 |
21.8 |
0.0 |
| H6 |
C14 |
C15 |
H7 |
241.5 |
120.1 |
| H8 |
C15 |
C14 |
H9 |
117.7 |
239.9 |
| C12 |
N13 |
C14 |
H5 |
121.9 |
179.9 |
| C02 |
C03 |
C04 |
C08 |
179.9 |
179.9 |
| C04 |
C03 |
C08 |
C07 |
359.9 |
359.8 |
| C03 |
C04 |
C05 |
C06 |
0.6 |
0.0 |
| C05 |
C04 |
C03 |
H1 |
180.0 |
180.0 |
| C03 |
C04 |
C05 |
H2 |
180.6 |
180.0 |
| C02 |
C03 |
C08 |
C04 |
180.1 |
180.1 |
| C08 |
C03 |
C04 |
C05 |
359.8 |
0.1 |
| C08 |
C03 |
C04 |
H1 |
179.8 |
180.1 |
| C03 |
C08 |
C07 |
H4 |
179.9 |
180.1 |
| C05 |
C04 |
C03 |
C08 |
359.8 |
0.1 |
| C03 |
C04 |
C05 |
H1 |
180.0 |
180.0 |
| C06 |
C05 |
C04 |
H2 |
180.0 |
180.1 |
| C04 |
C05 |
C06 |
H3 |
179.2 |
179.9 |
| C09 |
C08 |
C07 |
H4 |
359.9 |
0.1 |
| C08 |
C07 |
C06 |
H3 |
180.5 |
180.0 |
| C06 |
C05 |
C04 |
H1 |
180.7 |
180.0 |
| C04 |
C05 |
C06 |
H2 |
180.0 |
179.9 |
| C07 |
C06 |
C05 |
H3 |
180.0 |
180.0 |
| C03 |
C08 |
C07 |
C06 |
359.9 |
0.1 |
| C07 |
C06 |
C05 |
H2 |
179.2 |
180.0 |
| C05 |
C06 |
C07 |
H3 |
180.0 |
180.0 |
| H1 |
C04 |
C03 |
C08 |
179.8 |
180.1 |
| C03 |
C04 |
H1 |
C05 |
180.0 |
180.0 |
| H1 |
C04 |
C05 |
C06 |
180.7 |
180.0 |
| H1 |
C04 |
C05 |
H2 |
0.6 |
360.0 |
| C04 |
C05 |
H2 |
C06 |
180.0 |
180.1 |
| H2 |
C05 |
C04 |
H1 |
0.6 |
360.0 |
| H2 |
C05 |
C06 |
H3 |
359.3 |
359.9 |
| H3 |
C06 |
C05 |
H2 |
359.3 |
359.9 |
| H4 |
C07 |
C06 |
H3 |
0.5 |
0.0 |
| C15 |
C14 |
H6 |
H7 |
117.6 |
239.9 |
| H6 |
C14 |
C15 |
H8 |
274.6 |
180.0 |
| H6 |
C14 |
C15 |
H9 |
156.9 |
300.1 |
| H6 |
C14 |
N13 |
H5 |
261.0 |
120.1 |
| C15 |
C14 |
H7 |
H6 |
242.4 |
120.1 |
| H7 |
C14 |
C15 |
H8 |
33.1 |
59.9 |
| H7 |
C14 |
C15 |
H9 |
275.4 |
180.0 |
| H7 |
C14 |
N13 |
H5 |
142.5 |
240.0 |
| N16 |
C15 |
H8 |
H9 |
116.4 |
240.0 |
| H8 |
C15 |
C14 |
H6 |
274.6 |
180.0 |
| H8 |
C15 |
C14 |
H7 |
33.1 |
59.9 |
| C14 |
C15 |
H8 |
H9 |
243.5 |
120.0 |
| N16 |
C15 |
H9 |
H8 |
243.6 |
120.0 |
| H9 |
C15 |
C14 |
H6 |
156.9 |
300.1 |
| H9 |
C15 |
C14 |
H7 |
275.4 |
180.0 |
| C14 |
C15 |
H9 |
H8 |
116.5 |
240.0 |
| H10 |
N16 |
C17 |
C18 |
35.2 |
304.0 |
| H10 |
N16 |
C17 |
H12 |
156.5 |
64.0 |
| H10 |
N16 |
C17 |
H13 |
273.9 |
184.0 |
| H10 |
N16 |
C15 |
H8 |
133.0 |
296.0 |
| H10 |
N16 |
C15 |
H9 |
250.7 |
176.0 |
| N16 |
C17 |
H12 |
C18 |
231.8 |
240.0 |
| H12 |
C17 |
N16 |
H10 |
156.5 |
64.0 |
| N16 |
C17 |
H12 |
H13 |
115.9 |
120.0 |
| H12 |
C17 |
C18 |
O19 |
337.8 |
305.0 |
| C18 |
C17 |
H12 |
H13 |
244.1 |
240.0 |
| H12 |
C17 |
C18 |
H14 |
99.2 |
65.0 |
| H12 |
C17 |
C18 |
H15 |
216.4 |
185.0 |
| N16 |
C17 |
H13 |
C18 |
128.2 |
119.9 |
| H13 |
C17 |
N16 |
H10 |
273.9 |
184.0 |
| N16 |
C17 |
H13 |
H12 |
244.1 |
240.0 |
| H13 |
C17 |
C18 |
O19 |
220.3 |
185.0 |
| C18 |
C17 |
H13 |
H12 |
115.9 |
120.1 |
| H13 |
C17 |
C18 |
H14 |
341.7 |
305.0 |
| H13 |
C17 |
C18 |
H15 |
98.9 |
64.9 |
| C17 |
C18 |
H14 |
O19 |
231.1 |
240.1 |
| H14 |
C18 |
C17 |
H12 |
99.2 |
65.0 |
| H14 |
C18 |
C17 |
H13 |
341.7 |
305.0 |
| C17 |
C18 |
H14 |
H15 |
115.5 |
120.0 |
| O19 |
C18 |
H14 |
H15 |
244.4 |
240.0 |
| H14 |
C18 |
O19 |
H16 |
133.6 |
60.0 |
| C17 |
C18 |
H15 |
O19 |
128.9 |
120.0 |
| H15 |
C18 |
C17 |
H12 |
216.4 |
185.0 |
| H15 |
C18 |
C17 |
H13 |
98.9 |
64.9 |
| C17 |
C18 |
H15 |
H14 |
244.4 |
240.1 |
| O19 |
C18 |
H15 |
H14 |
115.5 |
120.0 |
| H15 |
C18 |
O19 |
H16 |
16.4 |
300.0 |
| H16 |
O19 |
C18 |
H14 |
133.6 |
60.0 |
| H16 |
O19 |
C18 |
H15 |
16.4 |
300.0 |
| H18 |
C21 |
C22 |
C30 |
178.8 |
179.9 |
| H18 |
C21 |
C20 |
H17 |
1.5 |
359.8 |
| H19 |
N23 |
C22 |
C30 |
56.9 |
353.7 |
| C25 |
C24 |
H20 |
H21 |
117.1 |
240.0 |
| H20 |
C24 |
N23 |
H19 |
217.1 |
120.0 |
| C25 |
C24 |
H21 |
H20 |
242.9 |
120.0 |
| H21 |
C24 |
N23 |
H19 |
98.9 |
240.0 |
| N26 |
C25 |
H22 |
H23 |
116.7 |
239.9 |
| H22 |
C25 |
C24 |
H20 |
75.6 |
180.0 |
| H22 |
C25 |
C24 |
H21 |
193.8 |
60.0 |
| N26 |
C25 |
H23 |
H22 |
243.3 |
120.0 |
| H23 |
C25 |
C24 |
H20 |
317.8 |
300.0 |
| H23 |
C25 |
C24 |
H21 |
75.9 |
180.0 |
| H24 |
N26 |
C25 |
H22 |
121.4 |
296.1 |
| H24 |
N26 |
C25 |
H23 |
239.3 |
176.0 |
| C28 |
C27 |
H26 |
H27 |
116.5 |
239.9 |
| H26 |
C27 |
N26 |
H24 |
150.4 |
64.0 |
| C28 |
C27 |
H27 |
H26 |
243.5 |
120.0 |
| H27 |
C27 |
N26 |
H24 |
32.7 |
184.0 |
| O29 |
C28 |
H28 |
H29 |
116.8 |
240.0 |
| H28 |
C28 |
C27 |
H26 |
221.9 |
65.0 |
| H28 |
C28 |
C27 |
H27 |
339.6 |
305.0 |
| O29 |
C28 |
H29 |
H28 |
243.2 |
120.0 |
| H29 |
C28 |
C27 |
H26 |
103.9 |
185.0 |
| H29 |
C28 |
C27 |
H27 |
221.7 |
65.0 |
| H30 |
O29 |
C28 |
H28 |
301.0 |
59.9 |
| H30 |
O29 |
C28 |
H29 |
59.0 |
300.0 |