PDB Chemical Component AKB

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for AKB

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	O1	1.292	1.208
C1	O2	1.291	1.342
C1	C2	1.514	1.505
O2	HO2	0.951	0.967
C2	C3	1.505	1.507
C2	N4	1.499	1.470
C2	H21	1.114	1.089
C3	C4	1.547	1.507
C3	O3	1.275	1.207
C4	H41	1.115	1.089
C4	H42	1.115	1.090
C4	H43	1.115	1.090
N4	HN41	1.020	1.009
N4	HN42	1.020	1.008

Bond Angles for AKB

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
O1	C1	O2	121.2	119.9
O1	C1	C2	117.4	120.0
O2	C1	C2	121.2	120.0
C1	O2	HO2	121.2	120.1
C1	C2	C3	108.2	109.5
C1	C2	N4	117.6	109.5
C1	C2	H21	104.2	109.5
C3	C2	N4	107.7	109.4
C3	C2	H21	114.7	109.5
C2	C3	C4	115.7	120.0
C2	C3	O3	124.6	120.1
N4	C2	H21	104.7	109.4
C2	N4	HN41	117.7	106.7
C2	N4	HN42	109.3	106.7
C4	C3	O3	119.7	120.0
C3	C4	H41	115.8	109.5
C3	C4	H42	110.0	109.5
C3	C4	H43	109.9	109.5
H41	C4	H42	109.9	109.5
H41	C4	H43	109.9	109.4
H42	C4	H43	100.3	109.4
HN41	N4	HN42	109.2	106.7

Torsion Angles for AKB

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O2	C1	O1	C2	184.4	179.9
O1	C1	O2	HO2	180.0	0.1
O1	C1	C2	C3	299.0	89.9
O1	C1	C2	N4	176.8	329.9
O1	C1	C2	H21	61.5	210.0
O1	C1	O2	C2	175.5	180.1
O2	C1	C2	C3	114.6	270.0
O2	C1	C2	N4	352.4	150.0
O2	C1	C2	H21	237.1	30.1
O1	C1	C2	O2	184.4	179.9
C2	C1	O2	HO2	4.5	180.0
C3	C2	C1	N4	122.2	120.0
C3	C2	C1	H21	237.5	239.9
C1	C2	C3	C4	202.0	90.0
C1	C2	C3	O3	21.4	270.0
N4	C2	C1	H21	115.3	119.9
C1	C2	N4	HN41	179.9	60.1
C1	C2	N4	HN42	54.7	173.8
HO2	O2	C1	C2	4.5	180.0
C1	C2	C3	N4	231.9	240.0
C1	C2	C3	H21	115.8	120.1
N4	C2	C3	H21	243.9	240.1
C3	C2	N4	HN41	57.5	300.0
C3	C2	N4	HN42	292.3	53.7
C4	C3	C2	O3	180.6	179.9
C2	C3	C4	H41	180.0	180.0
C2	C3	C4	H42	305.3	300.1
C2	C3	C4	H43	54.7	60.0
C1	C2	N4	C3	122.5	120.1
C1	C2	N4	H21	245.0	240.0
C3	C2	N4	H21	122.5	119.9
N4	C2	C3	C4	330.1	210.0
N4	C2	C3	O3	149.6	30.1
HN41	N4	C2	HN42	125.2	246.2
C1	C2	H21	C3	241.9	239.9
C1	C2	H21	N4	124.1	120.0
C3	C2	H21	N4	242.2	240.1
H21	C2	C3	C4	86.2	329.9
H21	C2	C3	O3	265.6	150.0
H21	C2	N4	HN41	295.0	180.0
H21	C2	N4	HN42	169.8	293.8
C4	C3	C2	N4	330.1	210.0
C4	C3	C2	H21	86.2	329.9
C2	C3	C4	O3	179.5	180.1
H41	C4	C3	H42	234.7	239.9
H41	C4	C3	H43	125.2	120.0
H42	C4	C3	H43	250.5	240.1
O3	C3	C2	N4	149.6	30.1
O3	C3	C2	H21	265.6	150.0
C2	C3	O3	C4	180.6	179.9
O3	C3	C4	H41	0.5	360.0
O3	C3	C4	H42	125.8	120.0
O3	C3	C4	H43	235.3	240.0
H41	C4	C3	O3	0.5	360.0
C3	C4	H41	H42	125.3	120.1
C3	C4	H41	H43	234.8	240.0
H42	C4	H41	H43	109.4	120.0
H42	C4	C3	O3	125.8	120.0
C3	C4	H42	H41	231.4	239.9
C3	C4	H42	H43	115.8	120.0
H41	C4	H42	H43	244.3	240.0
H43	C4	C3	O3	235.3	240.0
C3	C4	H43	H41	128.5	120.0
C3	C4	H43	H42	244.2	240.0
H41	C4	H43	H42	115.7	120.0
HN41	N4	C2	H21	295.0	180.0
C2	N4	HN41	HN42	234.8	113.7
HN42	N4	C2	H21	169.8	293.8
C2	N4	HN42	HN41	130.0	246.3