PDB Chemical Component AIX

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for AIX

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C9	C8	1.401	1.382
C8	C7	1.418	1.382
C8	H8	1.080	1.080
C7	C5	1.391	1.382
C11	C5	1.415	1.382
C5	C4	1.477	1.507
C1	C6	1.549	1.530
C16	C6	1.503	1.531
C6	C12	1.539	1.541
C6	S1	1.788	1.837
C14	N1	1.464	1.465
N1	C3	1.349	1.348
N1	HN1	1.000	0.971
O2	C2	1.281	1.208
O1	C2	1.253	1.343
C2	C12	1.514	1.507
C12	N3	1.449	1.466
N3	C13	1.443	1.489
N3	HN3	1.000	1.009
C3	C4	1.499	1.506
C4	N2	1.446	1.469
C4	H4	1.100	1.090
C1	H1	1.100	1.090
C1	H1A	1.100	1.090
C1	H1B	1.100	1.090
C3	O3	1.212	1.213
C7	H7	1.080	1.080
C9	C10	1.404	1.382
C9	H9	1.080	1.080
C10	C11	1.410	1.383
C10	H10	1.080	1.080
C11	H11	1.080	1.080
C12	H12	1.099	1.090
S1	C13	1.775	1.841
C13	C14	1.573	1.530
C13	H13	1.100	1.090
C15	C14	1.556	1.507
C14	H14	1.100	1.090
O4	C15	1.257	1.208
C15	H15	1.080	1.080
C16	H16	1.100	1.091
C16	H16A	1.100	1.090
C16	H16B	1.100	1.090
N2	HN2	1.000	1.010
N2	HN2A	1.000	1.009
O1	HO1	0.950	0.966

Bond Angles for AIX

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C9	C8	H8	120.7	120.0
C7	C8	H8	120.7	120.0
C8	C7	C5	119.5	120.0
C8	C7	H7	120.3	120.0
C5	C4	N2	113.2	109.5
C5	C4	H4	105.7	109.4
C1	C6	C12	112.7	110.6
C1	C6	S1	112.0	110.6
C16	C6	S1	112.8	110.6
C12	C6	S1	99.8	103.5
C6	C12	C2	116.0	108.8
C6	C12	N3	108.2	112.9
C6	C12	H12	105.9	108.8
C6	S1	C13	101.9	94.9
C14	N1	HN1	118.3	120.0
C3	N1	HN1	118.2	120.0
N1	C3	C4	118.4	120.0
N1	C3	O3	123.2	119.9
C2	C12	N3	109.6	108.8
C2	C12	H12	104.4	108.8
C12	N3	C13	116.5	110.9
C12	N3	HN3	107.2	111.0
C13	N3	HN3	107.2	111.0
N3	C13	C14	106.2	111.2
N3	C13	H13	122.3	111.1
C3	C4	N2	106.8	109.5
C3	C4	H4	112.2	109.5
N2	C4	H4	109.0	109.5
C4	N2	HN2	109.5	111.0
C4	N2	HN2A	109.5	111.0
H1	C1	H1A	109.4	109.5
H1	C1	H1B	109.5	109.5
H1A	C1	H1B	109.5	109.4
C10	C9	H9	119.1	120.0
C9	C10	C11	119.9	120.0
C9	C10	H10	120.1	120.0
C11	C10	H10	120.1	120.0
C10	C11	H11	121.0	119.9
S1	C13	H13	107.3	111.2
C14	C13	H13	101.2	111.0
C13	C14	H14	109.6	109.5
C15	C14	H14	113.1	109.4
O4	C15	H15	119.0	120.0
H16	C16	H16A	109.5	109.5
H16	C16	H16B	109.5	109.5
H16A	C16	H16B	109.5	109.5
HN2	N2	HN2A	109.5	111.0

Torsion Angles for AIX

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C7	C8	C9	H8	180.0	179.7
C9	C8	C7	H7	178.3	180.2
C9	C8	C7	H8	180.0	180.3
H8	C8	C7	C5	178.3	180.0
H8	C8	C7	H7	358.3	359.9
C5	C7	C8	H8	178.3	180.0
C8	C7	C5	H7	180.0	179.9
C7	C5	C4	N2	119.4	140.0
C7	C5	C4	H4	0.2	20.0
C11	C5	C4	N2	296.8	320.5
C11	C5	C4	H4	177.6	200.5
C8	C7	C5	C4	178.7	179.9
N1	C3	C4	C5	99.8	80.0
C3	C4	C5	N2	119.4	120.0
C3	C4	C5	H4	238.7	240.0
N2	C4	C5	H4	119.2	120.0
C5	C4	N2	HN2	226.1	296.0
C5	C4	N2	HN2A	346.0	60.0
C16	C6	C1	S1	236.1	237.0
C12	C6	C1	S1	111.6	114.0
C1	C6	C12	C2	35.7	358.5
C1	C6	C12	N3	272.1	237.6
C1	C6	C12	H12	150.9	116.9
C1	C6	S1	C13	105.3	100.1
C1	C6	C16	S1	123.4	123.0
C12	C6	C16	S1	247.8	246.0
C16	C6	C12	H12	29.8	353.9
C16	C6	S1	C13	225.8	223.2
C1	C6	C12	S1	241.0	241.5
C16	C6	C12	S1	119.9	118.5
C12	C6	S1	C13	345.7	341.7
C2	C12	C6	N3	123.6	120.9
C2	C12	C6	H12	244.7	241.7
C6	C12	N3	C13	317.3	31.9
C6	C12	N3	HN3	77.2	155.8
C1	C6	S1	C12	119.5	118.5
S1	C6	C12	C2	154.7	117.0
S1	C6	C12	N3	31.1	356.1
S1	C6	C12	H12	269.9	235.4
C6	S1	C13	H13	225.2	276.7
C3	N1	C14	HN1	180.0	179.9
C14	N1	C3	O3	0.7	0.0
C14	N1	C3	HN1	180.0	180.1
N1	C3	C4	N2	223.0	200.0
N1	C3	C4	H4	342.4	320.0
HN1	N1	C3	C4	357.0	360.0
HN1	N1	C3	O3	180.7	180.0
O2	C2	C12	H12	322.9	141.6
O1	C2	C12	H12	141.5	321.6
C2	C12	C6	S1	154.7	117.0
C6	C12	C2	N3	237.2	236.6
C6	C12	C2	H12	116.1	118.4
C2	C12	N3	C13	189.9	270.9
C2	C12	N3	HN3	309.9	34.9
N3	C12	C6	S1	31.1	356.1
C6	C12	N3	C2	127.4	120.9
C6	C12	N3	H12	243.2	239.2
C2	C12	N3	H12	115.8	118.3
C13	N3	C12	HN3	240.0	236.1
C12	N3	C13	C14	261.7	199.6
C12	N3	C13	H13	146.7	75.5
C6	S1	C13	N3	353.8	34.6
C12	N3	C13	HN3	120.0	123.9
S1	C13	N3	H13	242.1	242.0
C14	C13	N3	H13	115.0	124.1
N3	C13	C14	H14	211.5	300.1
C12	N3	HN3	C13	234.2	236.1
HN3	N3	C13	C14	141.7	75.7
HN3	N3	C13	H13	26.7	311.6
C5	C4	C3	N2	236.7	240.0
C5	C4	C3	H4	117.3	120.0
C4	C3	N1	HN1	357.0	360.0
N1	C3	C4	O3	183.5	180.0
N2	C4	C3	H4	240.6	240.0
C3	C4	N2	HN2	104.7	176.0
C3	C4	N2	HN2A	224.7	300.0
C5	C4	N2	H4	242.7	240.1
C3	C4	N2	H4	121.4	120.0
HN2	N2	C4	HN2A	240.0	236.0
C5	C4	H4	N2	121.9	120.0
C3	C4	H4	N2	241.9	240.0
H4	C4	N2	HN2	343.3	56.0
H4	C4	N2	HN2A	103.3	179.9
H1	C1	C6	C12	144.1	60.0
H1	C1	C6	S1	32.4	306.0
H1A	C1	H1	H1B	120.0	120.0
H1A	C1	C6	C12	264.0	180.0
H1A	C1	C6	S1	152.4	66.0
H1	C1	H1A	H1B	240.0	240.0
H1B	C1	C6	C12	24.1	299.9
H1B	C1	C6	S1	272.4	185.9
H1	C1	H1B	H1A	120.0	120.0
O3	C3	N1	HN1	180.7	180.0
N1	C3	O3	C4	176.3	180.0
O3	C3	C4	N2	39.5	20.0
O3	C3	C4	H4	158.9	140.0
H7	C7	C8	H8	358.3	359.9
C8	C7	H7	C5	180.0	180.1
C10	C9	C8	H8	182.0	180.3
C11	C10	C9	H10	180.0	180.1
C9	C10	C11	H11	181.2	180.0
H9	C9	C8	H8	2.0	0.3
H9	C9	C10	C11	178.2	180.0
H9	C9	C10	H10	358.2	359.9
C11	C10	C9	H9	178.2	180.0
C9	C10	C11	H10	180.0	179.9
H10	C10	C9	H9	358.2	359.9
C9	C10	H10	C11	180.0	180.1
H10	C10	C11	H11	1.2	0.1
H11	C11	C10	H10	1.2	0.1
H12	C12	C6	S1	269.9	235.4
C6	C12	H12	C2	237.1	241.6
C6	C12	H12	N3	118.2	123.3
C2	C12	H12	N3	241.1	241.7
H12	C12	N3	C13	74.1	152.6
H12	C12	N3	HN3	194.0	276.6
S1	C13	N3	HN3	268.8	193.6
N3	C13	S1	H13	128.5	117.9
C14	C13	S1	H13	244.5	235.9
S1	C13	C14	H14	98.7	188.5
C6	S1	C13	C14	109.7	152.6
C13	C14	N1	HN1	267.6	335.0
C14	C13	N3	HN3	141.7	75.7
N3	C13	C14	H13	231.3	235.8
S1	C13	C14	H13	118.5	124.3
C15	C14	C13	H14	123.1	119.9
H13	C13	N3	HN3	26.7	311.6
N3	C13	H13	C14	117.5	124.2
H13	C13	C14	H14	340.2	64.2
C15	C14	N1	HN1	23.5	95.0
C15	C14	C13	H13	103.3	184.2
C13	C14	C15	H14	239.1	240.0
H14	C14	N1	HN1	146.5	215.0
H14	C14	C13	H13	340.2	64.2
O4	C15	C14	H14	226.4	240.0
H15	C15	C14	H14	46.4	60.0
H16	C16	C6	S1	32.4	174.1
H16A	C16	H16	H16B	120.0	120.1
H16A	C16	C6	S1	152.4	294.0
H16	C16	H16A	H16B	240.0	240.0
H16B	C16	C6	S1	272.4	54.1
H16	C16	H16B	H16A	120.0	120.0
HN2	N2	C4	H4	343.3	56.0
C4	N2	HN2	HN2A	120.0	124.0
HN2A	N2	C4	H4	103.3	179.9
C4	N2	HN2A	HN2	240.0	236.0