PDB Chemical Component AHG
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for AHG
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
P1 |
O1P |
1.549 |
1.480 |
P1 |
O2P |
1.544 |
1.611 |
P1 |
O3P |
1.546 |
1.609 |
P1 |
O1 |
1.588 |
1.611 |
O2P |
HOP2 |
0.950 |
0.967 |
O3P |
HOP3 |
0.950 |
0.966 |
O1 |
C1 |
1.385 |
1.428 |
C1 |
C2 |
1.474 |
1.530 |
C1 |
H11 |
1.102 |
1.090 |
C1 |
H12 |
1.087 |
1.090 |
C2 |
C3 |
1.544 |
1.550 |
C2 |
O5 |
1.440 |
1.445 |
C2 |
H2 |
1.083 |
1.090 |
C3 |
O3 |
1.489 |
1.429 |
C3 |
C4 |
1.598 |
1.548 |
C3 |
H3 |
1.141 |
1.090 |
O3 |
HO3 |
1.000 |
0.966 |
C4 |
O4 |
1.459 |
1.428 |
C4 |
C5 |
1.534 |
1.541 |
C4 |
H4 |
1.137 |
1.089 |
O4 |
HO4 |
0.990 |
0.967 |
C5 |
O5 |
1.380 |
1.436 |
C5 |
C6 |
1.534 |
1.531 |
C5 |
H5 |
1.082 |
1.089 |
C6 |
O6 |
1.440 |
1.428 |
C6 |
H61 |
1.076 |
1.089 |
C6 |
H62 |
1.077 |
1.089 |
O6 |
P2 |
1.603 |
1.609 |
P2 |
O4P |
1.474 |
1.480 |
P2 |
O5P |
1.485 |
1.610 |
P2 |
O6P |
1.473 |
1.610 |
O5P |
HOP5 |
0.950 |
0.967 |
O6P |
HOP6 |
0.950 |
0.966 |
Bond Angles for AHG
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1P |
P1 |
O2P |
114.4 |
109.5 |
O1P |
P1 |
O3P |
107.9 |
109.6 |
O1P |
P1 |
O1 |
107.3 |
109.4 |
O2P |
P1 |
O3P |
110.7 |
109.5 |
O2P |
P1 |
O1 |
106.0 |
109.4 |
P1 |
O2P |
HOP2 |
114.4 |
106.8 |
O3P |
P1 |
O1 |
110.4 |
109.5 |
P1 |
O3P |
HOP3 |
107.9 |
106.8 |
P1 |
O1 |
C1 |
116.1 |
106.8 |
O1 |
C1 |
C2 |
103.7 |
109.5 |
O1 |
C1 |
H11 |
114.1 |
109.5 |
O1 |
C1 |
H12 |
113.5 |
109.4 |
C2 |
C1 |
H11 |
115.9 |
109.5 |
C2 |
C1 |
H12 |
110.9 |
109.5 |
C1 |
C2 |
C3 |
120.5 |
110.8 |
C1 |
C2 |
O5 |
99.2 |
110.6 |
C1 |
C2 |
H2 |
108.5 |
110.6 |
H11 |
C1 |
H12 |
99.2 |
109.5 |
C3 |
C2 |
O5 |
108.2 |
103.4 |
C3 |
C2 |
H2 |
111.9 |
110.6 |
C2 |
C3 |
O3 |
121.3 |
110.9 |
C2 |
C3 |
C4 |
99.6 |
102.1 |
C2 |
C3 |
H3 |
103.9 |
110.9 |
O5 |
C2 |
H2 |
107.2 |
110.6 |
C2 |
O5 |
C5 |
112.4 |
107.0 |
O3 |
C3 |
C4 |
101.4 |
110.8 |
O3 |
C3 |
H3 |
118.5 |
110.8 |
C3 |
O3 |
HO3 |
123.1 |
106.8 |
C4 |
C3 |
H3 |
110.2 |
110.9 |
C3 |
C4 |
O4 |
129.2 |
110.5 |
C3 |
C4 |
C5 |
105.8 |
104.2 |
C3 |
C4 |
H4 |
104.6 |
110.5 |
O4 |
C4 |
C5 |
100.9 |
110.6 |
O4 |
C4 |
H4 |
113.6 |
110.4 |
C4 |
O4 |
HO4 |
124.3 |
106.8 |
C5 |
C4 |
H4 |
97.7 |
110.5 |
C4 |
C5 |
O5 |
102.4 |
107.3 |
C4 |
C5 |
C6 |
120.6 |
109.8 |
C4 |
C5 |
H5 |
112.5 |
109.8 |
O5 |
C5 |
C6 |
102.6 |
110.0 |
O5 |
C5 |
H5 |
107.3 |
109.9 |
C6 |
C5 |
H5 |
109.9 |
109.9 |
C5 |
C6 |
O6 |
106.6 |
109.4 |
C5 |
C6 |
H61 |
115.8 |
109.5 |
C5 |
C6 |
H62 |
106.3 |
109.4 |
O6 |
C6 |
H61 |
112.0 |
109.5 |
O6 |
C6 |
H62 |
110.5 |
109.5 |
C6 |
O6 |
P2 |
120.6 |
106.8 |
H61 |
C6 |
H62 |
105.5 |
109.5 |
O6 |
P2 |
O4P |
105.0 |
109.5 |
O6 |
P2 |
O5P |
111.8 |
109.5 |
O6 |
P2 |
O6P |
110.5 |
109.5 |
O4P |
P2 |
O5P |
110.0 |
109.4 |
O4P |
P2 |
O6P |
110.3 |
109.5 |
O5P |
P2 |
O6P |
109.2 |
109.5 |
P2 |
O5P |
HOP5 |
111.8 |
106.8 |
P2 |
O6P |
HOP6 |
110.5 |
106.7 |
Torsion Angles for AHG
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O2P |
P1 |
O1P |
O3P |
236.3 |
120.1 |
O2P |
P1 |
O1P |
O1 |
117.3 |
240.1 |
O1P |
P1 |
O2P |
HOP2 |
180.0 |
299.9 |
O3P |
P1 |
O1P |
O1 |
241.0 |
120.0 |
O1P |
P1 |
O3P |
HOP3 |
180.1 |
180.0 |
O1P |
P1 |
O1 |
C1 |
180.7 |
60.1 |
O1P |
P1 |
O2P |
O3P |
122.2 |
239.9 |
O1P |
P1 |
O2P |
O1 |
242.0 |
119.9 |
O3P |
P1 |
O2P |
O1 |
119.8 |
240.0 |
O2P |
P1 |
O3P |
HOP3 |
305.9 |
59.9 |
O2P |
P1 |
O1 |
C1 |
58.1 |
180.0 |
O1P |
P1 |
O3P |
O2P |
234.1 |
120.1 |
O1P |
P1 |
O3P |
O1 |
117.0 |
240.0 |
O2P |
P1 |
O3P |
O1 |
242.9 |
119.9 |
O3P |
P1 |
O2P |
HOP2 |
57.8 |
60.1 |
O3P |
P1 |
O1 |
C1 |
298.1 |
300.0 |
O1P |
P1 |
O1 |
O2P |
122.6 |
240.1 |
O1P |
P1 |
O1 |
O3P |
242.6 |
120.1 |
O2P |
P1 |
O1 |
O3P |
120.0 |
240.0 |
O1 |
P1 |
O2P |
HOP2 |
298.0 |
180.0 |
O1 |
P1 |
O3P |
HOP3 |
63.1 |
300.0 |
P1 |
O1 |
C1 |
C2 |
139.3 |
180.0 |
P1 |
O1 |
C1 |
H11 |
266.3 |
60.0 |
P1 |
O1 |
C1 |
H12 |
18.9 |
300.0 |
HOP2 |
O2P |
P1 |
O3P |
57.8 |
60.1 |
HOP2 |
O2P |
P1 |
O1 |
298.0 |
180.0 |
HOP3 |
O3P |
P1 |
O1 |
63.1 |
300.0 |
C2 |
C1 |
O1 |
H11 |
233.0 |
120.0 |
C2 |
C1 |
O1 |
H12 |
120.4 |
240.0 |
O1 |
C1 |
C2 |
C3 |
60.7 |
184.4 |
O1 |
C1 |
C2 |
O5 |
178.3 |
298.5 |
O1 |
C1 |
C2 |
H2 |
290.0 |
61.4 |
H11 |
C1 |
O1 |
H12 |
247.4 |
120.0 |
O1 |
C1 |
C2 |
H11 |
125.8 |
240.0 |
O1 |
C1 |
C2 |
H12 |
237.9 |
120.0 |
H11 |
C1 |
C2 |
H12 |
112.0 |
240.0 |
C3 |
C2 |
C1 |
O5 |
242.4 |
245.9 |
C3 |
C2 |
C1 |
H2 |
130.7 |
123.0 |
C1 |
C2 |
C3 |
O3 |
359.8 |
37.4 |
C1 |
C2 |
C3 |
C4 |
109.5 |
155.6 |
C1 |
C2 |
C3 |
H3 |
223.2 |
273.8 |
O5 |
C2 |
C1 |
H2 |
248.3 |
237.1 |
C1 |
C2 |
O5 |
C5 |
214.4 |
201.2 |
O1 |
C1 |
H11 |
C2 |
239.6 |
120.0 |
O1 |
C1 |
H11 |
H12 |
121.0 |
240.0 |
C2 |
C1 |
H11 |
H12 |
241.3 |
120.0 |
H11 |
C1 |
C2 |
C3 |
294.9 |
304.4 |
H11 |
C1 |
C2 |
O5 |
52.5 |
58.5 |
H11 |
C1 |
C2 |
H2 |
164.2 |
181.4 |
O1 |
C1 |
H12 |
C2 |
116.2 |
240.0 |
O1 |
C1 |
H12 |
H11 |
238.6 |
120.0 |
C2 |
C1 |
H12 |
H11 |
122.4 |
240.0 |
H12 |
C1 |
C2 |
C3 |
182.9 |
64.4 |
H12 |
C1 |
C2 |
O5 |
300.4 |
178.5 |
H12 |
C1 |
C2 |
H2 |
52.2 |
301.4 |
C3 |
C2 |
C1 |
H11 |
294.9 |
304.4 |
C3 |
C2 |
C1 |
H12 |
182.9 |
64.4 |
C1 |
C2 |
C3 |
O5 |
112.9 |
118.6 |
C1 |
C2 |
C3 |
H2 |
230.8 |
237.0 |
O5 |
C2 |
C3 |
H2 |
117.9 |
118.4 |
C3 |
C2 |
O5 |
C5 |
340.8 |
319.9 |
O3 |
C3 |
C2 |
C4 |
250.3 |
241.9 |
O3 |
C3 |
C2 |
H3 |
136.6 |
123.6 |
C2 |
C3 |
O3 |
HO3 |
315.7 |
177.1 |
C4 |
C3 |
C2 |
H3 |
246.3 |
241.7 |
C2 |
C3 |
C4 |
O4 |
140.9 |
98.0 |
C2 |
C3 |
C4 |
C5 |
21.9 |
339.2 |
C2 |
C3 |
C4 |
H4 |
279.3 |
220.5 |
O5 |
C2 |
C1 |
H11 |
52.5 |
58.5 |
O5 |
C2 |
C1 |
H12 |
300.4 |
178.5 |
C1 |
C2 |
O5 |
C3 |
233.6 |
241.3 |
C1 |
C2 |
O5 |
H2 |
112.7 |
122.9 |
C3 |
C2 |
O5 |
H2 |
239.2 |
241.6 |
O5 |
C2 |
C3 |
O3 |
246.9 |
278.8 |
O5 |
C2 |
C3 |
C4 |
356.7 |
37.0 |
O5 |
C2 |
C3 |
H3 |
110.4 |
155.2 |
C4 |
C5 |
O5 |
C2 |
32.9 |
26.6 |
C2 |
O5 |
C5 |
C6 |
158.5 |
146.0 |
C2 |
O5 |
C5 |
H5 |
274.3 |
267.1 |
H2 |
C2 |
C1 |
H11 |
164.2 |
181.4 |
H2 |
C2 |
C1 |
H12 |
52.2 |
301.4 |
C1 |
C2 |
H2 |
C3 |
135.2 |
123.1 |
C1 |
C2 |
H2 |
O5 |
253.8 |
237.1 |
C3 |
C2 |
H2 |
O5 |
118.5 |
114.0 |
H2 |
C2 |
C3 |
O3 |
129.0 |
160.4 |
H2 |
C2 |
C3 |
C4 |
238.7 |
278.5 |
H2 |
C2 |
C3 |
H3 |
352.5 |
36.8 |
H2 |
C2 |
O5 |
C5 |
101.6 |
78.4 |
O3 |
C3 |
C2 |
O5 |
246.9 |
278.8 |
O3 |
C3 |
C2 |
H2 |
129.0 |
160.4 |
C2 |
C3 |
O3 |
C4 |
108.8 |
112.7 |
C2 |
C3 |
O3 |
H3 |
229.5 |
236.3 |
C4 |
C3 |
O3 |
H3 |
120.7 |
123.6 |
O3 |
C3 |
C4 |
O4 |
265.7 |
216.1 |
O3 |
C3 |
C4 |
C5 |
146.7 |
97.3 |
O3 |
C3 |
C4 |
H4 |
44.2 |
338.6 |
C4 |
C3 |
C2 |
O5 |
356.7 |
37.0 |
C4 |
C3 |
C2 |
H2 |
238.7 |
278.5 |
C2 |
C3 |
C4 |
O3 |
235.1 |
241.8 |
C2 |
C3 |
C4 |
H3 |
108.7 |
118.3 |
O3 |
C3 |
C4 |
H3 |
233.6 |
236.4 |
C4 |
C3 |
O3 |
HO3 |
206.9 |
64.4 |
O4 |
C4 |
C3 |
C5 |
119.0 |
118.8 |
O4 |
C4 |
C3 |
H4 |
221.6 |
237.5 |
C3 |
C4 |
O4 |
HO4 |
26.3 |
61.4 |
C5 |
C4 |
C3 |
H4 |
102.6 |
118.7 |
C3 |
C4 |
C5 |
O5 |
326.5 |
357.9 |
C3 |
C4 |
C5 |
C6 |
213.7 |
238.4 |
C3 |
C4 |
C5 |
H5 |
81.4 |
117.4 |
H3 |
C3 |
C2 |
O5 |
110.4 |
155.2 |
H3 |
C3 |
C2 |
H2 |
352.5 |
36.8 |
C2 |
C3 |
H3 |
O3 |
138.0 |
123.6 |
C2 |
C3 |
H3 |
C4 |
254.1 |
247.2 |
O3 |
C3 |
H3 |
C4 |
116.1 |
123.6 |
H3 |
C3 |
O3 |
HO3 |
86.2 |
300.8 |
H3 |
C3 |
C4 |
O4 |
32.2 |
339.7 |
H3 |
C3 |
C4 |
C5 |
273.1 |
220.9 |
H3 |
C3 |
C4 |
H4 |
170.6 |
102.2 |
HO3 |
O3 |
C3 |
C4 |
206.9 |
64.4 |
HO3 |
O3 |
C3 |
H3 |
86.2 |
300.8 |
O4 |
C4 |
C3 |
H3 |
32.2 |
339.7 |
C3 |
C4 |
O4 |
C5 |
239.0 |
245.2 |
C3 |
C4 |
O4 |
H4 |
135.5 |
122.5 |
C5 |
C4 |
O4 |
H4 |
256.5 |
237.3 |
O4 |
C4 |
C5 |
O5 |
190.2 |
239.2 |
O4 |
C4 |
C5 |
C6 |
77.3 |
119.7 |
O4 |
C4 |
C5 |
H5 |
305.0 |
358.7 |
C2 |
O5 |
C5 |
C4 |
32.9 |
26.6 |
C5 |
C4 |
C3 |
H3 |
273.1 |
220.9 |
C3 |
C4 |
C5 |
O4 |
136.4 |
118.7 |
C3 |
C4 |
C5 |
H4 |
252.3 |
241.3 |
O4 |
C4 |
C5 |
H4 |
116.0 |
122.6 |
C5 |
C4 |
O4 |
HO4 |
147.3 |
176.2 |
O5 |
C5 |
C4 |
C6 |
112.9 |
119.5 |
O5 |
C5 |
C4 |
H5 |
245.2 |
240.5 |
C6 |
C5 |
C4 |
H5 |
132.3 |
121.0 |
C4 |
C5 |
C6 |
O6 |
159.7 |
180.0 |
C4 |
C5 |
C6 |
H61 |
34.3 |
300.0 |
C4 |
C5 |
C6 |
H62 |
277.5 |
60.0 |
H4 |
C4 |
C3 |
H3 |
170.6 |
102.2 |
C3 |
C4 |
H4 |
O4 |
214.1 |
237.5 |
C3 |
C4 |
H4 |
C5 |
108.6 |
114.8 |
O4 |
C4 |
H4 |
C5 |
254.5 |
237.3 |
H4 |
C4 |
O4 |
HO4 |
250.8 |
298.9 |
H4 |
C4 |
C5 |
O5 |
74.2 |
116.6 |
H4 |
C4 |
C5 |
C6 |
321.3 |
357.1 |
H4 |
C4 |
C5 |
H5 |
189.0 |
236.1 |
HO4 |
O4 |
C4 |
C5 |
147.3 |
176.2 |
HO4 |
O4 |
C4 |
H4 |
250.8 |
298.9 |
C5 |
O5 |
C2 |
H2 |
101.6 |
78.4 |
O5 |
C5 |
C4 |
H4 |
74.2 |
116.6 |
C4 |
C5 |
O5 |
C6 |
234.4 |
240.5 |
C4 |
C5 |
O5 |
H5 |
118.6 |
119.4 |
C6 |
C5 |
O5 |
H5 |
244.2 |
238.9 |
O5 |
C5 |
C6 |
O6 |
46.9 |
62.1 |
O5 |
C5 |
C6 |
H61 |
281.6 |
182.1 |
O5 |
C5 |
C6 |
H62 |
164.8 |
302.1 |
C6 |
C5 |
C4 |
H4 |
321.3 |
357.1 |
C4 |
C5 |
C6 |
O5 |
112.7 |
117.9 |
C4 |
C5 |
C6 |
H5 |
226.6 |
239.0 |
O5 |
C5 |
C6 |
H5 |
113.9 |
121.2 |
O6 |
C6 |
C5 |
H61 |
125.4 |
240.0 |
O6 |
C6 |
C5 |
H62 |
242.2 |
120.0 |
C5 |
C6 |
O6 |
P2 |
157.3 |
180.0 |
H61 |
C6 |
C5 |
H62 |
116.8 |
240.0 |
H5 |
C5 |
C4 |
H4 |
189.0 |
236.1 |
C4 |
C5 |
H5 |
O5 |
248.2 |
242.1 |
C4 |
C5 |
H5 |
C6 |
137.4 |
121.0 |
O5 |
C5 |
H5 |
C6 |
249.2 |
238.8 |
H5 |
C5 |
C6 |
O6 |
293.1 |
301.0 |
H5 |
C5 |
C6 |
H61 |
167.7 |
61.0 |
H5 |
C5 |
C6 |
H62 |
50.9 |
181.0 |
O6 |
C6 |
C5 |
H5 |
293.1 |
301.0 |
C5 |
C6 |
O6 |
H61 |
232.3 |
120.0 |
C5 |
C6 |
O6 |
H62 |
115.0 |
240.0 |
H61 |
C6 |
O6 |
H62 |
242.7 |
120.1 |
C6 |
O6 |
P2 |
O4P |
103.3 |
60.0 |
C6 |
O6 |
P2 |
O5P |
343.9 |
180.0 |
C6 |
O6 |
P2 |
O6P |
222.2 |
300.0 |
H61 |
C6 |
C5 |
H5 |
167.7 |
61.0 |
C5 |
C6 |
H61 |
O6 |
122.6 |
240.1 |
C5 |
C6 |
H61 |
H62 |
242.8 |
120.0 |
O6 |
C6 |
H61 |
H62 |
120.2 |
239.9 |
H61 |
C6 |
O6 |
P2 |
284.9 |
60.0 |
H62 |
C6 |
C5 |
H5 |
50.9 |
181.0 |
C5 |
C6 |
H62 |
O6 |
244.7 |
120.0 |
C5 |
C6 |
H62 |
H61 |
123.5 |
240.0 |
O6 |
C6 |
H62 |
H61 |
238.8 |
120.1 |
H62 |
C6 |
O6 |
P2 |
42.3 |
299.9 |
P2 |
O6 |
C6 |
H61 |
284.9 |
60.0 |
P2 |
O6 |
C6 |
H62 |
42.3 |
299.9 |
O4P |
P2 |
O6 |
O5P |
119.3 |
240.1 |
O4P |
P2 |
O6 |
O6P |
241.1 |
120.0 |
O5P |
P2 |
O6 |
O6P |
121.8 |
240.0 |
O6 |
P2 |
O5P |
HOP5 |
180.0 |
180.0 |
O6 |
P2 |
O6P |
HOP6 |
180.0 |
300.0 |
O6 |
P2 |
O4P |
O5P |
239.5 |
120.0 |
O6 |
P2 |
O4P |
O6P |
119.0 |
240.0 |
O5P |
P2 |
O4P |
O6P |
239.5 |
120.0 |
O4P |
P2 |
O5P |
HOP5 |
63.7 |
300.0 |
O4P |
P2 |
O6P |
HOP6 |
295.7 |
179.9 |
O6 |
P2 |
O5P |
O4P |
116.3 |
240.0 |
O6 |
P2 |
O5P |
O6P |
237.5 |
120.1 |
O4P |
P2 |
O5P |
O6P |
121.2 |
240.0 |
O5P |
P2 |
O6P |
HOP6 |
56.7 |
60.0 |
O6 |
P2 |
O6P |
O4P |
244.3 |
120.0 |
O6 |
P2 |
O6P |
O5P |
123.3 |
239.9 |
O4P |
P2 |
O6P |
O5P |
239.0 |
119.9 |
O6P |
P2 |
O5P |
HOP5 |
302.5 |
60.0 |
HOP5 |
O5P |
P2 |
O6P |
302.5 |
60.0 |