PDB Chemical Component AH0

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for AH0

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C1	C2	1.566	1.537
C1	O5	1.431	1.445
C1	O6	1.436	1.440
C1	H1	1.100	1.090
C2	N2	1.463	1.465
C2	C3	1.573	1.532
C2	H2	1.100	1.090
N2	C7	1.330	1.349
N2	HN2	1.000	0.970
C7	O7	1.236	1.212
C7	C8	1.542	1.506
C8	H81	1.100	1.089
C8	H82	1.100	1.091
C8	H83	1.100	1.090
C3	O3	1.415	1.429
C3	C4	1.551	1.533
C3	H3	1.100	1.089
O3	CA	1.426	1.429
C4	O4	1.433	1.429
C4	C5	1.551	1.538
C4	H4	1.100	1.090
O4	HO4	0.950	0.967
C5	O5	1.431	1.449
C5	C6	1.512	1.546
C5	H5	1.100	1.091
C6	O6	1.438	1.439
C6	H61	1.100	1.090
C6	H62	1.099	1.090
CA	CB	1.526	1.530
CA	C	1.529	1.507
CA	HA	1.100	1.090
CB	HB1	1.100	1.090
CB	HB2	1.100	1.090
CB	HB3	1.100	1.090
C	O	1.232	1.208
C	OXT	1.333	1.342
OXT	HXT	0.950	0.966

Bond Angles for AH0

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C2	C1	O5	111.2	107.5
C2	C1	O6	110.8	108.2
C2	C1	H1	105.9	111.4
C1	C2	N2	108.7	109.6
C1	C2	C3	110.4	108.9
C1	C2	H2	109.5	109.6
O5	C1	O6	104.2	105.8
O5	C1	H1	112.3	111.4
C1	O5	C5	100.0	102.7
O6	C1	H1	112.7	112.2
C1	O6	C6	107.7	107.0
N2	C2	C3	109.8	109.5
N2	C2	H2	110.1	109.6
C2	N2	C7	130.5	120.0
C2	N2	HN2	114.8	120.1
C3	C2	H2	108.3	109.7
C2	C3	O3	111.7	109.5
C2	C3	C4	112.3	109.3
C2	C3	H3	105.4	109.5
C7	N2	HN2	114.8	119.9
N2	C7	O7	123.3	120.0
N2	C7	C8	114.6	120.0
O7	C7	C8	122.1	120.0
C7	C8	H81	109.5	109.5
C7	C8	H82	109.5	109.4
C7	C8	H83	109.5	109.5
H81	C8	H82	109.5	109.5
H81	C8	H83	109.5	109.5
H82	C8	H83	109.5	109.4
O3	C3	C4	107.7	109.5
O3	C3	H3	110.2	109.5
C3	O3	CA	114.8	114.0
C4	C3	H3	109.6	109.5
C3	C4	O4	109.0	109.6
C3	C4	C5	110.5	108.5
C3	C4	H4	108.9	109.7
O3	CA	CB	111.3	109.4
O3	CA	C	109.1	109.5
O3	CA	HA	109.0	109.5
O4	C4	C5	108.7	109.6
O4	C4	H4	110.7	109.6
C4	O4	HO4	109.5	114.0
C5	C4	H4	109.1	109.8
C4	C5	O5	111.0	107.2
C4	C5	C6	115.7	107.7
C4	C5	H5	102.1	112.6
O5	C5	C6	102.5	102.6
O5	C5	H5	115.4	112.7
C6	C5	H5	110.7	113.3
C5	C6	O6	101.9	104.9
C5	C6	H61	112.1	110.4
C5	C6	H62	113.7	110.3
O6	C6	H61	112.1	110.4
O6	C6	H62	113.7	110.3
H61	C6	H62	103.8	110.4
CB	CA	C	111.0	109.4
CB	CA	HA	107.1	109.5
CA	CB	HB1	109.5	109.5
CA	CB	HB2	109.5	109.5
CA	CB	HB3	109.5	109.5
C	CA	HA	109.3	109.5
CA	C	O	120.5	120.0
CA	C	OXT	116.2	120.0
HB1	CB	HB2	109.5	109.4
HB1	CB	HB3	109.5	109.4
HB2	CB	HB3	109.5	109.5
O	C	OXT	123.3	120.0
C	OXT	HXT	109.5	117.0

Torsion Angles for AH0

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O5	C1	C2	O6	244.6	246.1
O5	C1	C2	H1	122.2	122.4
C2	C1	O5	C5	75.0	74.7
O6	C1	C2	H1	237.6	236.3
C2	C1	O6	C6	264.2	271.0
N2	C2	C1	C3	120.5	119.8
N2	C2	C1	H2	239.7	239.7
C1	C2	N2	C7	126.6	85.0
C1	C2	N2	HN2	306.6	265.0
C3	C2	C1	H2	119.2	120.0
C1	C2	C3	O3	274.7	291.6
C1	C2	C3	C4	35.9	51.5
C1	C2	C3	H3	155.1	171.5
C2	C1	O5	O6	119.4	115.5
C2	C1	O5	H1	241.6	237.7
O5	C1	C2	N2	63.5	55.9
O5	C1	C2	C3	302.9	296.1
O5	C1	C2	H2	183.8	176.2
O6	C1	O5	H1	122.2	122.2
O5	C1	O6	C6	23.9	26.0
C4	C5	O5	C1	283.4	284.8
C1	O5	C5	C6	47.5	38.2
C1	O5	C5	H5	167.9	160.5
C2	C1	O6	O5	240.3	245.0
C2	C1	O6	H1	118.4	123.2
O6	C1	C2	N2	178.9	169.8
O6	C1	C2	C3	58.3	50.0
O6	C1	C2	H2	299.2	290.1
O5	C1	O6	H1	238.1	238.3
O6	C1	O5	C5	315.6	319.2
C5	C6	O6	C1	5.5	358.3
C1	O6	C6	H61	245.6	239.4
C1	O6	C6	H62	128.2	117.2
C2	C1	H1	O5	121.5	120.1
C2	C1	H1	O6	238.8	238.6
H1	C1	C2	N2	301.3	293.5
H1	C1	C2	C3	180.8	173.8
H1	C1	C2	H2	61.6	53.8
O5	C1	H1	O6	117.3	118.5
H1	C1	O5	C5	193.4	197.0
H1	C1	O6	C6	145.8	147.8
N2	C2	C1	O5	63.5	55.9
N2	C2	C1	O6	178.9	169.8
N2	C2	C1	H1	301.3	293.5
C1	C2	N2	C3	239.1	240.7
C1	C2	N2	H2	119.9	120.3
C3	C2	N2	H2	240.8	239.6
N2	C2	C3	O3	154.8	171.8
N2	C2	C3	C4	276.0	291.8
N2	C2	C3	H3	35.2	51.8
C7	N2	C2	HN2	180.0	180.0
C2	N2	C7	O7	0.4	0.1
C2	N2	C7	C8	180.0	180.0
C3	C2	C1	O5	302.9	296.1
C3	C2	C1	O6	58.3	50.0
C3	C2	C1	H1	180.8	173.8
C1	C2	C3	N2	119.9	119.8
C1	C2	C3	H2	240.1	240.1
N2	C2	C3	H2	120.2	120.3
C3	C2	N2	C7	247.5	204.3
C3	C2	N2	HN2	67.5	24.3
O3	C3	C2	C4	238.8	240.1
O3	C3	C2	H3	119.6	120.0
C2	C3	O3	CA	290.4	270.5
C4	C3	C2	H3	240.8	240.0
C2	C3	C4	O4	82.3	67.7
C2	C3	C4	C5	322.9	308.0
C2	C3	C4	H4	203.1	188.1
H2	C2	C1	O5	183.8	176.2
H2	C2	C1	O6	299.2	290.1
H2	C2	C1	H1	61.6	53.8
C1	C2	H2	N2	240.6	239.8
C1	C2	H2	C3	120.5	119.5
N2	C2	H2	C3	239.9	239.7
H2	C2	N2	C7	6.7	324.7
H2	C2	N2	HN2	186.7	144.7
H2	C2	C3	O3	34.6	51.5
H2	C2	C3	C4	155.8	171.4
H2	C2	C3	H3	275.0	291.4
C7	N2	C2	C3	247.5	204.3
C7	N2	C2	H2	6.7	324.7
C2	N2	C7	HN2	180.0	180.0
O7	C7	N2	C8	180.5	180.1
N2	C7	C8	H81	280.9	0.0
N2	C7	C8	H82	40.9	120.1
N2	C7	C8	H83	160.9	240.0
HN2	N2	C2	C3	67.5	24.3
HN2	N2	C2	H2	186.7	144.7
C2	N2	HN2	C7	180.0	180.0
HN2	N2	C7	O7	180.5	180.0
HN2	N2	C7	C8	360.0	360.0
O7	C7	N2	HN2	180.5	180.0
N2	C7	O7	C8	179.5	179.9
O7	C7	C8	H81	100.4	180.0
O7	C7	C8	H82	220.4	300.0
O7	C7	C8	H83	340.4	59.9
C8	C7	N2	HN2	360.0	360.0
N2	C7	C8	O7	180.5	180.1
H81	C8	C7	H82	240.0	240.0
H81	C8	C7	H83	120.0	120.1
H82	C8	C7	H83	240.0	240.1
C7	C8	H81	H82	120.0	120.0
C7	C8	H81	H83	240.0	239.9
H82	C8	H81	H83	120.0	119.9
C7	C8	H82	H81	240.0	239.9
C7	C8	H82	H83	120.0	120.0
H81	C8	H82	H83	240.0	240.0
C7	C8	H83	H81	120.0	120.1
C7	C8	H83	H82	240.0	240.1
H81	C8	H83	H82	120.0	120.0
O3	C3	C2	H2	34.6	51.5
C2	C3	O3	C4	123.8	119.9
C2	C3	O3	H3	243.3	239.9
C4	C3	O3	H3	119.4	120.0
O3	C3	C4	O4	205.7	187.7
O3	C3	C4	C5	86.3	68.0
O3	C3	C4	H4	326.5	308.1
C3	O3	CA	CB	249.8	272.1
C3	O3	CA	C	127.0	152.1
C3	O3	CA	HA	7.7	32.1
C4	C3	C2	H2	155.8	171.4
C2	C3	C4	O3	236.6	240.0
C2	C3	C4	H3	116.7	120.0
O3	C3	C4	H3	240.2	240.0
C4	C3	O3	CA	166.6	150.6
O4	C4	C3	C5	119.4	119.7
O4	C4	C3	H4	239.2	239.6
C3	C4	O4	HO4	102.4	180.1
C5	C4	C3	H4	119.8	119.9
C3	C4	C5	O5	59.8	64.8
C3	C4	C5	C6	303.6	314.9
C3	C4	C5	H5	183.3	189.2
H3	C3	C2	H2	275.0	291.4
C2	C3	H3	O3	120.6	120.1
C2	C3	H3	C4	239.0	240.1
O3	C3	H3	C4	118.3	120.0
H3	C3	O3	CA	47.1	30.6
H3	C3	C4	O4	325.5	307.7
H3	C3	C4	C5	206.2	188.0
H3	C3	C4	H4	86.3	68.1
CA	O3	C3	C4	166.6	150.6
CA	O3	C3	H3	47.1	30.6
CB	CA	O3	C	122.8	119.9
CB	CA	O3	HA	242.1	240.0
O3	CA	CB	HB1	271.1	304.5
O3	CA	CB	HB2	31.1	64.5
O3	CA	CB	HB3	151.1	184.5
C	CA	O3	HA	119.3	120.1
O3	CA	C	O	173.1	4.9
O3	CA	C	OXT	353.9	185.0
O4	C4	C3	H3	325.5	307.7
C3	C4	O4	C5	239.5	241.0
C3	C4	O4	H4	119.7	120.4
C5	C4	O4	H4	240.2	239.4
O4	C4	C5	O5	300.3	305.1
O4	C4	C5	C6	184.0	195.2
O4	C4	C5	H5	63.8	69.5
C1	O5	C5	C4	283.4	284.8
C5	C4	C3	H3	206.2	188.0
C3	C4	C5	O4	119.5	119.7
C3	C4	C5	H4	240.3	240.2
O4	C4	C5	H4	120.8	120.5
C5	C4	O4	HO4	222.9	299.1
O5	C5	C4	C6	116.3	109.8
O5	C5	C4	H5	236.5	235.5
C6	C5	C4	H5	120.3	125.7
C4	C5	C6	O6	88.0	90.1
C4	C5	C6	H61	208.0	209.0
C4	C5	C6	H62	325.3	331.2
H4	C4	C3	H3	86.3	68.1
C3	C4	H4	O4	240.2	239.6
C3	C4	H4	C5	120.7	119.1
O4	C4	H4	C5	240.4	239.5
H4	C4	O4	HO4	342.7	59.6
H4	C4	C5	O5	179.5	184.6
H4	C4	C5	C6	63.3	74.7
H4	C4	C5	H5	303.0	309.1
HO4	O4	C4	C5	222.9	299.1
HO4	O4	C4	H4	342.7	59.6
C5	O5	C1	O6	315.6	319.2
C5	O5	C1	H1	193.4	197.0
O5	C5	C4	H4	179.5	184.6
C4	C5	O5	C6	235.9	246.7
C4	C5	O5	H5	115.5	124.4
C6	C5	O5	H5	239.6	237.7
O5	C5	C6	O6	327.1	337.2
O5	C5	C6	H61	87.0	96.1
O5	C5	C6	H62	204.4	218.3
C1	O6	C6	C5	5.5	358.3
C6	C5	C4	H4	63.3	74.7
C4	C5	C6	O5	121.0	112.9
C4	C5	C6	H5	244.5	234.8
O5	C5	C6	H5	123.6	121.9
O6	C6	C5	H61	240.0	241.1
O6	C6	C5	H62	122.7	118.8
H61	C6	C5	H62	242.7	237.7
H5	C5	C4	H4	303.0	309.1
C4	C5	H5	O5	239.5	238.6
C4	C5	H5	C6	123.7	122.6
O5	C5	H5	C6	244.2	244.0
H5	C5	C6	O6	203.5	215.3
H5	C5	C6	H61	323.5	334.2
H5	C5	C6	H62	80.8	96.5
C6	O6	C1	H1	145.8	147.8
O6	C6	C5	H5	203.5	215.3
C5	C6	O6	H61	120.0	118.9
C5	C6	O6	H62	237.3	241.2
H61	C6	O6	H62	117.3	122.3
H61	C6	C5	H5	323.5	334.2
C5	C6	H61	O6	246.2	244.5
C5	C6	H61	H62	123.1	122.2
O6	C6	H61	H62	236.9	237.8
H62	C6	C5	H5	80.8	96.5
C5	C6	H62	O6	116.0	115.5
C5	C6	H62	H61	238.0	237.8
O6	C6	H62	H61	122.0	122.3
O3	CA	CB	C	238.3	240.0
O3	CA	CB	HA	119.0	120.0
C	CA	CB	HA	240.8	240.0
CB	CA	C	O	50.2	245.0
CB	CA	C	OXT	231.0	65.1
HB1	CB	CA	HB2	240.0	240.0
HB1	CB	CA	HB3	120.0	120.0
HB2	CB	CA	HB3	240.0	240.0
O3	CA	C	CB	122.9	119.9
O3	CA	C	HA	240.9	239.9
CB	CA	C	HA	117.9	120.0
C	CA	CB	HB1	32.8	64.5
C	CA	CB	HB2	152.8	184.4
C	CA	CB	HB3	272.8	304.4
O	C	CA	OXT	179.2	179.9
CA	C	OXT	HXT	179.2	180.0
O3	CA	HA	CB	239.5	240.0
O3	CA	HA	C	119.2	120.1
CB	CA	HA	C	239.7	240.1
HA	CA	CB	HB1	152.0	184.5
HA	CA	CB	HB2	272.1	304.4
HA	CA	CB	HB3	32.0	64.4
HA	CA	C	O	292.3	125.0
HA	CA	C	OXT	113.1	305.1
HB1	CB	CA	C	32.8	64.5
HB1	CB	CA	HA	152.0	184.5
CA	CB	HB1	HB2	120.0	120.0
CA	CB	HB1	HB3	240.0	239.9
HB2	CB	HB1	HB3	120.0	119.9
HB2	CB	CA	C	152.8	184.4
HB2	CB	CA	HA	272.1	304.4
CA	CB	HB2	HB1	240.0	240.0
CA	CB	HB2	HB3	120.0	120.0
HB1	CB	HB2	HB3	240.0	240.1
HB3	CB	CA	C	272.8	304.4
HB3	CB	CA	HA	32.0	64.4
CA	CB	HB3	HB1	120.0	120.0
CA	CB	HB3	HB2	240.0	240.0
HB1	CB	HB3	HB2	120.0	119.9
O	C	CA	HA	292.3	125.0
CA	C	O	OXT	180.8	180.1
O	C	OXT	HXT	0.0	0.1
OXT	C	CA	HA	113.1	305.1
CA	C	OXT	O	179.2	179.9