PDB Chemical Component AG4

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for AG4

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O14 C1 1.238  
C1 N15 1.328  
C1 C6 1.498  
N15 C16 1.472  
C16 C17 1.551  
C17 C19 1.547  
C19 O18 1.447  
O18 C20 1.435  
C6 C7 1.392  
C6 C5 1.415  
C7 C2 1.387  
C5 N4 1.363  
C5 S10 1.715  
N4 C3 1.351  
C3 C2 1.423  
C2 S8 1.597  
S8 O12 1.546  
S8 O11 1.532  
S8 N9 1.678  
S10 C13 1.709  
C13 C21 1.408  
C13 C25 1.394  
C21 C22 1.391  
C22 C23 1.395  
C23 C24 1.400  
C24 C25 1.403  
N15 HN15 1.000  
C16 H16 1.100  
C16 H16A 1.100  
C17 H17 1.100  
C17 H17A 1.100  
C19 H19 1.100  
C19 H19A 1.100  
C20 H20 1.100  
C20 H20A 1.100  
C20 H20B 1.100  
C7 H7 1.080  
C3 H3 1.080  
N9 HN9 1.000  
N9 HN9A 1.000  
C21 H21 1.080  
C22 H22 1.081  
C23 H23 1.080  
C24 H24 1.080  
C25 H25 1.080  

Bond Angles for AG4

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O14 C1 N15 122.1  
O14 C1 C6 116.8  
N15 C1 C6 120.7  
C1 N15 C16 120.0  
C1 N15 HN15 120.0  
C1 C6 C7 116.2  
C1 C6 C5 121.3  
N15 C16 C17 117.8  
C16 N15 HN15 120.0  
N15 C16 H16 106.8  
N15 C16 H16A 104.8  
C16 C17 C19 117.6  
C17 C16 H16 106.8  
C17 C16 H16A 104.8  
C16 C17 H17 106.8  
C16 C17 H17A 104.9  
C17 C19 O18 110.0  
C19 C17 H17 106.8  
C19 C17 H17A 104.9  
C17 C19 H19 109.3  
C17 C19 H19A 109.2  
C19 O18 C20 115.5  
O18 C19 H19 109.3  
O18 C19 H19A 109.2  
O18 C20 H20 109.5  
O18 C20 H20A 109.4  
O18 C20 H20B 109.5  
C7 C6 C5 122.4  
C6 C7 C2 116.5  
C6 C7 H7 121.7  
C6 C5 N4 119.6  
C6 C5 S10 118.9  
C7 C2 C3 120.1  
C7 C2 S8 122.2  
C2 C7 H7 121.7  
N4 C5 S10 121.5  
C5 N4 C3 119.2  
C5 S10 C13 108.6  
N4 C3 C2 122.0  
N4 C3 H3 119.0  
C3 C2 S8 117.6  
C2 C3 H3 119.0  
C2 S8 O12 106.8  
C2 S8 O11 104.6  
C2 S8 N9 112.4  
O12 S8 O11 111.8  
O12 S8 N9 109.0  
O11 S8 N9 112.0  
S8 N9 HN9 109.5  
S8 N9 HN9A 109.5  
S10 C13 C21 120.4  
S10 C13 C25 119.9  
C21 C13 C25 119.6  
C13 C21 C22 120.9  
C13 C21 H21 119.5  
C13 C25 C24 119.5  
C13 C25 H25 120.3  
C21 C22 C23 119.4  
C22 C21 H21 119.5  
C21 C22 H22 120.3  
C22 C23 C24 120.1  
C23 C22 H22 120.3  
C22 C23 H23 119.9  
C23 C24 C25 120.5  
C24 C23 H23 120.0  
C23 C24 H24 119.7  
C25 C24 H24 119.8  
C24 C25 H25 120.3  
H16 C16 H16A 116.3  
H17 C17 H17A 116.1  
H19 C19 H19A 109.8  
H20 C20 H20A 109.5  
H20 C20 H20B 109.4  
H20A C20 H20B 109.5  
HN9 N9 HN9A 109.4  

Torsion Angles for AG4

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
N15 C1 O14 C6 172.9  
O14 C1 N15 C16 348.2  
O14 C1 N15 HN15 168.2  
O14 C1 C6 C7 119.1  
O14 C1 C6 C5 302.8  
O14 C1 N15 C6 187.4  
N15 C1 C6 C7 306.1  
N15 C1 C6 C5 129.8  
C1 N15 C16 C17 263.3  
C16 N15 C1 HN15 180.0  
C1 N15 C16 H16 23.3  
C1 N15 C16 H16A 147.2  
O14 C1 C6 N15 173.0  
C6 C1 N15 C16 160.8  
C6 C1 N15 HN15 340.8  
C7 C6 C1 C5 176.3  
C1 C6 C7 C2 183.6  
C1 C6 C7 H7 3.7  
C1 C6 C5 N4 177.3  
C1 C6 C5 S10 356.2  
C16 N15 C1 C6 160.8  
C1 N15 C16 HN15 180.0  
N15 C16 C17 C19 55.3  
C17 C16 N15 H16 240.0  
C17 C16 N15 H16A 116.1  
N15 C16 C17 H17 175.3  
N15 C16 C17 H17A 299.1  
H16 C16 N15 H16A 236.1  
C17 C16 N15 HN15 83.3  
N15 C16 C17 H16 120.0  
N15 C16 C17 H16A 244.0  
C16 C17 C19 O18 71.3  
C19 C17 C16 H17 240.0  
C19 C17 C16 H17A 116.2  
C16 C17 C19 H19 191.3  
C16 C17 C19 H19A 311.5  
H16 C16 C17 H16A 123.9  
H17 C17 C16 H17A 236.2  
C19 C17 C16 H16 295.3  
C19 C17 C16 H16A 171.3  
C16 C17 C19 H17 120.0  
C16 C17 C19 H17A 243.9  
C17 C19 O18 C20 226.0  
O18 C19 C17 H19 240.0  
O18 C19 C17 H19A 119.8  
H17 C17 C19 H17A 123.8  
H19 C19 C17 H19A 239.8  
O18 C19 C17 H17 311.3  
O18 C19 C17 H17A 187.4  
C17 C19 O18 H19 120.0  
C17 C19 O18 H19A 240.2  
C19 O18 C20 H20 58.6  
C19 O18 C20 H20A 178.6  
C19 O18 C20 H20B 298.6  
H19 C19 O18 H19A 120.2  
C20 O18 C19 H19 106.0  
C20 O18 C19 H19A 345.8  
H20 C20 O18 H20A 240.0  
H20 C20 O18 H20B 120.0  
H20A C20 O18 H20B 240.0  
C1 C6 C7 C5 183.8  
C7 C6 C5 N4 1.2  
C7 C6 C5 S10 180.2  
C6 C7 C2 C3 359.1  
C6 C7 C2 S8 181.3  
C2 C7 C6 H7 180.0  
C1 C6 C5 C7 176.0  
C5 C6 C7 C2 359.9  
C5 C6 C7 H7 179.9  
N4 C5 C6 S10 181.1  
C6 C5 N4 C3 358.7  
C6 C5 S10 C13 184.5  
C2 C7 C6 C5 359.9  
C6 C7 C2 H7 180.0  
N4 C3 C2 C7 0.8  
C3 C2 C7 S8 177.8  
C7 C2 C3 H3 180.8  
C7 C2 S8 O12 235.8  
C7 C2 S8 O11 117.1  
C7 C2 S8 N9 355.3  
C6 C5 N4 S10 178.9  
N4 C5 S10 C13 3.4  
C5 N4 C3 C2 0.3  
C5 N4 C3 H3 180.3  
C6 C5 S10 N4 181.1  
S10 C5 N4 C3 179.8  
C5 S10 C13 C21 82.9  
C5 S10 C13 C25 259.7  
C7 C2 C3 N4 0.8  
C3 N4 C5 S10 179.8  
N4 C3 C2 S8 178.7  
C2 C3 N4 H3 180.0  
C7 C2 C3 S8 182.1  
C3 C2 C7 H7 179.1  
N4 C3 C2 H3 180.0  
C3 C2 S8 O12 58.0  
C3 C2 S8 O11 299.3  
C3 C2 S8 N9 177.5  
C7 C2 S8 C3 177.8  
S8 C2 C7 H7 1.3  
S8 C2 C3 H3 358.7  
O12 S8 C2 O11 118.7  
O12 S8 C2 N9 240.5  
O11 S8 C2 N9 121.8  
C2 S8 N9 HN9 269.5  
C2 S8 N9 HN9A 29.5  
C2 S8 O12 O11 246.1  
C2 S8 O12 N9 121.6  
O11 S8 O12 N9 235.5  
O12 S8 N9 HN9 27.7  
O12 S8 N9 HN9A 147.7  
C2 S8 O11 O12 115.2  
C2 S8 O11 N9 238.0  
O12 S8 O11 N9 122.8  
O11 S8 N9 HN9 152.0  
O11 S8 N9 HN9A 272.0  
C2 S8 N9 O12 241.8  
C2 S8 N9 O11 117.5  
O12 S8 N9 O11 235.7  
HN9 N9 S8 HN9A 240.0  
C21 C13 S10 C25 183.1  
S10 C13 C21 C22 179.1  
S10 C13 C21 H21 359.0  
S10 C13 C25 C24 180.9  
S10 C13 C25 H25 0.9  
S10 C13 C21 C25 176.9  
C21 C13 C25 C24 357.8  
C21 C13 C25 H25 177.8  
C13 C21 C22 C23 359.4  
C22 C21 C13 H21 180.0  
C13 C21 C22 H22 179.4  
S10 C13 C25 C21 183.1  
C25 C13 C21 C22 2.2  
C25 C13 C21 H21 182.2  
C23 C24 C25 C13 0.7  
C13 C25 C24 H24 180.7  
C24 C25 C13 H25 180.0  
C22 C21 C13 C25 2.2  
C13 C21 C22 H21 180.0  
C21 C22 C23 C24 359.1  
C23 C22 C21 H22 180.0  
C21 C22 C23 H23 179.1  
C23 C22 C21 H21 179.4  
C21 C22 C23 H22 180.0  
C22 C23 C24 C25 0.9  
C24 C23 C22 H23 180.0  
C22 C23 C24 H24 180.8  
C13 C25 C24 C23 0.7  
C24 C23 C22 H22 179.1  
C22 C23 C24 H23 180.0  
C25 C24 C23 H24 180.0  
C23 C24 C25 H25 180.7  
C13 C25 C24 H25 180.0  
C25 C24 C23 H23 180.8  
C23 C24 C25 H24 180.0  
HN15 N15 C1 C6 340.8  
C1 N15 HN15 C16 180.0  
HN15 N15 C16 C17 83.3  
HN15 N15 C16 H16 203.3  
HN15 N15 C16 H16A 327.3  
N15 C16 H16 C17 233.1  
H16 C16 N15 HN15 203.3  
N15 C16 H16 H16A 116.5  
H16 C16 C17 C19 295.3  
C17 C16 H16 H16A 243.4  
H16 C16 C17 H17 55.3  
H16 C16 C17 H17A 179.1  
N15 C16 H16A C17 124.7  
H16A C16 N15 HN15 327.3  
N15 C16 H16A H16 242.4  
H16A C16 C17 C19 171.3  
C17 C16 H16A H16 117.6  
H16A C16 C17 H17 291.4  
H16A C16 C17 H17A 55.2  
C16 C17 H17 C19 233.3  
H17 C17 C16 H16 55.3  
H17 C17 C16 H16A 291.4  
C16 C17 H17 H17A 116.6  
H17 C17 C19 O18 311.3  
C19 C17 H17 H17A 243.3  
H17 C17 C19 H19 71.3  
H17 C17 C19 H19A 191.5  
C16 C17 H17A C19 124.6  
H17A C17 C16 H16 179.1  
H17A C17 C16 H16A 55.2  
C16 C17 H17A H17 242.3  
H17A C17 C19 O18 187.4  
C19 C17 H17A H17 117.7  
H17A C17 C19 H19 307.4  
H17A C17 C19 H19A 67.6  
C17 C19 H19 O18 239.6  
H19 C19 C17 H17 71.3  
H19 C19 C17 H17A 307.4  
C17 C19 H19 H19A 119.8  
H19 C19 O18 C20 106.0  
O18 C19 H19 H19A 240.2  
C17 C19 H19A O18 120.3  
H19A C19 C17 H17 191.5  
H19A C19 C17 H17A 67.6  
C17 C19 H19A H19 240.1  
H19A C19 O18 C20 345.8  
O18 C19 H19A H19 119.8  
O18 C20 H20 H20A 120.0  
O18 C20 H20 H20B 240.0  
H20A C20 H20 H20B 120.0  
O18 C20 H20A H20 240.0  
O18 C20 H20A H20B 120.0  
H20 C20 H20A H20B 240.0  
O18 C20 H20B H20 120.0  
O18 C20 H20B H20A 240.0  
H20 C20 H20B H20A 120.0  
H7 C7 C6 C5 179.9  
C6 C7 H7 C2 180.0  
H7 C7 C2 C3 179.1  
H7 C7 C2 S8 1.3  
N4 C3 H3 C2 180.0  
H3 C3 C2 S8 358.7  
S8 N9 HN9 HN9A 120.0  
S8 N9 HN9A HN9 240.0  
H21 C21 C13 C25 182.2  
C13 C21 H21 C22 180.0  
H21 C21 C22 C23 179.4  
H21 C21 C22 H22 359.4  
C21 C22 H22 C23 180.0  
H22 C22 C21 H21 359.4  
H22 C22 C23 C24 179.1  
H22 C22 C23 H23 359.2  
C22 C23 H23 C24 180.0  
H23 C23 C22 H22 359.2  
H23 C23 C24 C25 180.8  
H23 C23 C24 H24 0.8  
C23 C24 H24 C25 180.0  
H24 C24 C23 H23 0.8  
H24 C24 C25 H25 0.7  
C13 C25 H25 C24 180.0  
H25 C25 C24 H24 0.7