PDB Chemical Component AFR

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for AFR

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
F1	C5	1.325	1.399
C5	C4	1.529	1.530
C5	C6	1.526	1.531
C5	O5	1.428	1.428
C4	O4	1.426	1.430
C4	C3	1.530	1.534
C6	O6	1.430	1.429
O5	C1	1.464	1.432
C1	C2	1.352	1.514
C2	O2	1.224	1.207
C2	C3	1.510	1.515
C3	O3	1.432	1.428
C4	H4	1.100	1.091
C6	H61	1.100	1.091
C6	H62	1.100	1.089
O4	HO4	0.950	0.967
C3	H3	1.100	1.090
O6	H6	0.950	0.967
C1	H11	1.100	1.091
C1	H12	1.100	1.089
O3	HO3	0.950	0.967

Bond Angles for AFR

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
F1	C5	C4	107.7	109.4
F1	C5	C6	108.2	109.4
F1	C5	O5	109.9	109.4
C4	C5	C6	114.1	109.4
C4	C5	O5	108.0	109.9
C5	C4	O4	110.4	109.6
C5	C4	C3	108.9	109.1
C5	C4	H4	108.7	109.6
C6	C5	O5	108.9	109.4
C5	C6	O6	111.7	109.4
C5	C6	H61	108.9	109.4
C5	C6	H62	108.9	109.5
C5	O5	C1	118.8	114.0
O4	C4	C3	109.9	109.5
O4	C4	H4	110.2	109.5
C4	O4	HO4	109.5	114.0
C4	C3	C2	109.9	108.0
C4	C3	O3	110.9	109.8
C3	C4	H4	108.7	109.6
C4	C3	H3	107.5	109.8
O6	C6	H61	108.9	109.5
O6	C6	H62	108.9	109.5
C6	O6	H6	109.5	113.9
O5	C1	C2	121.4	108.4
O5	C1	H11	106.4	109.7
O5	C1	H12	106.4	109.7
C1	C2	O2	118.9	121.1
C1	C2	C3	119.9	117.8
C2	C1	H11	106.4	109.6
C2	C1	H12	106.4	109.7
O2	C2	C3	121.1	121.1
C2	C3	O3	111.9	109.8
C2	C3	H3	107.8	109.7
O3	C3	H3	108.8	109.8
C3	O3	HO3	109.5	114.1
H61	C6	H62	109.4	109.5
H11	C1	H12	109.5	109.7

Torsion Angles for AFR

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
C4	C5	F1	C6	123.8	119.8
C4	C5	F1	O5	242.6	239.6
F1	C5	C4	O4	294.9	298.9
F1	C5	C4	C3	55.5	58.8
F1	C5	C4	H4	173.9	178.7
C6	C5	F1	O5	118.8	119.8
F1	C5	C6	O6	187.3	180.0
F1	C5	C6	H61	307.6	300.0
F1	C5	C6	H62	67.0	60.0
F1	C5	O5	C1	285.1	304.7
F1	C5	C4	C6	239.9	240.2
F1	C5	C4	O5	118.7	120.1
C6	C5	C4	O5	238.8	239.9
C4	C5	C6	O6	67.5	60.2
C4	C5	C6	H61	187.8	180.2
C4	C5	C6	H62	307.1	300.2
C4	C5	O5	C1	42.3	64.8
O4	C4	C5	C3	239.3	240.1
O4	C4	C5	H4	121.0	120.2
C5	C4	O4	HO4	180.0	180.0
C5	C4	C3	C2	55.9	51.8
C5	C4	C3	O3	180.1	171.5
C3	C4	C5	H4	241.6	240.0
C5	C4	C3	H3	298.9	292.3
F1	C5	C6	C4	119.8	119.8
F1	C5	C6	O5	240.5	240.2
C4	C5	C6	O5	120.7	120.4
C6	C5	C4	O4	55.0	58.7
C6	C5	C4	C3	175.7	178.6
C6	C5	C4	H4	294.0	298.5
C6	C5	O5	C1	166.7	184.9
O6	C6	C5	H61	239.6	240.0
O6	C6	C5	H62	120.3	120.0
C5	C6	O6	H6	180.0	179.9
H61	C6	C5	H62	240.7	240.0
F1	C5	O5	C4	242.8	239.9
F1	C5	O5	C6	118.4	119.8
C4	C5	O5	C6	235.6	239.9
O5	C5	C4	O4	176.2	178.8
O5	C5	C4	C3	296.9	298.7
O5	C5	C4	H4	55.3	58.6
O5	C5	C6	O6	306.7	299.8
O5	C5	C6	H61	67.1	59.8
O5	C5	C6	H62	186.4	179.8
C5	O5	C1	C2	345.3	304.5
C5	O5	C1	H11	106.9	64.1
C5	O5	C1	H12	223.6	184.7
O4	C4	C5	C6	55.0	58.7
O4	C4	C5	O5	176.2	178.8
C5	C4	O4	C3	120.1	119.6
C5	C4	O4	H4	239.9	239.8
O4	C4	C3	C2	176.9	171.8
O4	C4	C3	O3	301.1	291.4
C3	C4	O4	H4	119.8	120.2
O4	C4	C3	H3	59.9	52.2
C3	C4	C5	C6	175.7	178.6
C3	C4	C5	O5	296.9	298.7
C5	C4	C3	O4	239.0	240.1
C5	C4	C3	H4	118.4	119.9
O4	C4	C3	H4	239.4	239.9
C3	C4	O4	HO4	59.9	60.4
C1	C2	C3	C4	331.7	311.7
O2	C2	C3	C4	152.8	131.5
C2	C3	C4	O3	235.8	240.3
C2	C3	C4	H3	117.0	119.6
O3	C3	C4	H3	241.2	239.2
C4	C3	O3	HO3	224.5	180.0
O6	C6	C5	O5	306.7	299.8
C5	C6	O6	H61	120.4	119.9
C5	C6	O6	H62	239.6	240.0
H61	C6	O6	H62	119.3	120.0
O5	C1	C2	O2	185.7	228.7
O5	C1	C2	C3	6.9	48.6
C2	C1	O5	H11	238.3	240.3
C2	C1	O5	H12	121.6	119.8
H11	C1	O5	H12	243.3	239.4
C4	C3	C2	C1	331.7	311.7
O5	C1	C2	H11	121.7	119.7
O5	C1	C2	H12	238.4	240.2
O2	C2	C1	C3	178.9	180.1
C1	C2	C3	O3	208.1	192.0
C1	C2	C3	H3	88.5	71.3
H11	C1	C2	H12	116.7	120.5
C4	C3	C2	O2	152.8	131.5
C1	C2	O2	C3	181.1	179.9
O2	C2	C1	H11	64.1	109.0
O2	C2	C1	H12	307.4	348.5
O2	C2	C3	O3	29.2	11.8
O2	C2	C3	H3	269.7	251.2
C4	C3	C2	O3	123.6	119.7
C2	C3	C4	H4	297.6	291.9
C4	C3	C2	H3	243.1	240.4
C1	C2	C3	O2	178.9	180.1
C3	C2	C1	H11	245.2	288.8
C3	C2	C1	H12	128.5	168.3
O3	C3	C2	H3	119.5	120.7
C2	C3	O3	HO3	347.6	298.6
C4	C3	O3	C2	236.9	241.4
O3	C3	C4	H4	61.8	51.6
C4	C3	O3	H3	118.0	120.8
C2	C3	O3	H3	241.1	239.4
H4	C4	C5	C6	294.0	298.5
H4	C4	C5	O5	55.3	58.6
C5	C4	H4	O4	121.1	120.2
C5	C4	H4	C3	241.5	240.4
O4	C4	H4	C3	120.4	120.2
H4	C4	O4	HO4	300.1	300.2
H4	C4	C3	C2	297.6	291.9
H4	C4	C3	O3	61.8	51.6
H4	C4	C3	H3	180.5	172.4
H61	C6	C5	O5	67.1	59.8
C5	C6	H61	O6	237.9	240.1
C5	C6	H61	H62	119.0	120.0
O6	C6	H61	H62	241.1	240.0
H61	C6	O6	H6	59.7	60.0
H62	C6	C5	O5	186.4	179.8
C5	C6	H62	O6	122.1	120.0
C5	C6	H62	H61	241.0	240.0
O6	C6	H62	H61	119.0	120.0
H62	C6	O6	H6	300.4	300.0
HO4	O4	C4	C3	59.9	60.4
HO4	O4	C4	H4	300.1	300.2
C4	C3	H3	C2	118.4	118.5
C4	C3	H3	O3	239.9	239.2
H3	C3	C4	H4	180.5	172.4
C2	C3	H3	O3	121.5	120.7
H3	C3	O3	HO3	106.5	59.2
H6	O6	C6	H61	59.7	60.0
H6	O6	C6	H62	300.4	300.0
O5	C1	H11	C2	229.3	241.1
O5	C1	H11	H12	114.6	120.6
H11	C1	C2	O2	64.1	109.0
H11	C1	C2	C3	245.2	288.8
C2	C1	H11	H12	245.4	239.5
O5	C1	H12	C2	130.7	119.0
O5	C1	H12	H11	245.4	239.4
H12	C1	C2	O2	307.4	348.5
H12	C1	C2	C3	128.5	168.3
C2	C1	H12	H11	114.7	120.5
HO3	O3	C3	H3	106.5	59.2