PDB Chemical Component AEF
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for AEF
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C4 |
C7 |
1.539 |
1.530 |
| C4 |
C1 |
1.512 |
1.507 |
| C5 |
C8 |
1.396 |
1.388 |
| C5 |
C2 |
1.399 |
1.382 |
| C6 |
C8 |
1.397 |
1.388 |
| C6 |
C3 |
1.393 |
1.382 |
| C7 |
N9 |
1.484 |
1.469 |
| C8 |
O10 |
1.376 |
1.358 |
| C3 |
C1 |
1.393 |
1.383 |
| C2 |
C1 |
1.400 |
1.383 |
| C4 |
H4 |
1.100 |
1.089 |
| C4 |
H4A |
1.100 |
1.090 |
| C5 |
H5 |
1.081 |
1.079 |
| C6 |
H6 |
1.080 |
1.080 |
| C7 |
H7 |
1.101 |
1.090 |
| C7 |
H7A |
1.100 |
1.089 |
| O10 |
HO10 |
0.950 |
0.968 |
| C3 |
H3 |
1.080 |
1.080 |
| C2 |
H2 |
1.080 |
1.080 |
| N9 |
HN9 |
1.000 |
1.009 |
| N9 |
HN9A |
0.999 |
1.009 |
Bond Angles for AEF
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C7 |
C4 |
C1 |
110.4 |
109.4 |
| C4 |
C7 |
N9 |
112.1 |
109.4 |
| C7 |
C4 |
H4 |
109.1 |
109.5 |
| C7 |
C4 |
H4A |
108.9 |
109.5 |
| C4 |
C7 |
H7 |
108.6 |
109.4 |
| C4 |
C7 |
H7A |
108.0 |
109.5 |
| C4 |
C1 |
C3 |
119.6 |
119.9 |
| C4 |
C1 |
C2 |
121.0 |
120.0 |
| C1 |
C4 |
H4 |
109.2 |
109.5 |
| C1 |
C4 |
H4A |
109.0 |
109.4 |
| C8 |
C5 |
C2 |
119.0 |
119.9 |
| C5 |
C8 |
C6 |
120.9 |
119.9 |
| C5 |
C8 |
O10 |
120.1 |
120.1 |
| C8 |
C5 |
H5 |
120.5 |
120.0 |
| C5 |
C2 |
C1 |
120.6 |
120.1 |
| C2 |
C5 |
H5 |
120.5 |
120.1 |
| C5 |
C2 |
H2 |
119.7 |
119.9 |
| C8 |
C6 |
C3 |
119.4 |
119.9 |
| C6 |
C8 |
O10 |
119.0 |
120.1 |
| C8 |
C6 |
H6 |
120.3 |
120.0 |
| C6 |
C3 |
C1 |
120.7 |
120.1 |
| C3 |
C6 |
H6 |
120.3 |
120.1 |
| C6 |
C3 |
H3 |
119.7 |
119.9 |
| N9 |
C7 |
H7 |
108.6 |
109.5 |
| N9 |
C7 |
H7A |
108.0 |
109.5 |
| C7 |
N9 |
HN9 |
109.5 |
111.0 |
| C7 |
N9 |
HN9A |
109.5 |
111.0 |
| C8 |
O10 |
HO10 |
109.5 |
114.0 |
| C3 |
C1 |
C2 |
119.5 |
120.1 |
| C1 |
C3 |
H3 |
119.7 |
120.0 |
| C1 |
C2 |
H2 |
119.7 |
120.0 |
| H4 |
C4 |
H4A |
110.2 |
109.5 |
| H7 |
C7 |
H7A |
111.5 |
109.5 |
| HN9 |
N9 |
HN9A |
109.5 |
111.0 |
Torsion Angles for AEF
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C7 |
C4 |
C1 |
C3 |
306.2 |
90.0 |
| C7 |
C4 |
C1 |
C2 |
126.3 |
270.0 |
| C1 |
C4 |
C7 |
H4 |
240.0 |
240.0 |
| C1 |
C4 |
C7 |
H4A |
119.6 |
119.9 |
| N9 |
C7 |
C4 |
H7 |
240.0 |
240.0 |
| N9 |
C7 |
C4 |
H7A |
118.9 |
120.0 |
| C4 |
C7 |
N9 |
HN9 |
340.1 |
56.1 |
| C4 |
C7 |
N9 |
HN9A |
100.1 |
180.0 |
| H4 |
C4 |
C7 |
H4A |
239.6 |
239.9 |
| H7 |
C7 |
C4 |
H7A |
238.9 |
240.0 |
| C1 |
C4 |
C7 |
N9 |
187.3 |
180.0 |
| C7 |
C4 |
C1 |
H4 |
120.0 |
120.0 |
| C7 |
C4 |
C1 |
H4A |
240.4 |
240.1 |
| C1 |
C4 |
C7 |
H7 |
307.3 |
300.0 |
| C1 |
C4 |
C7 |
H7A |
68.5 |
60.0 |
| C5 |
C2 |
C1 |
C4 |
180.2 |
180.0 |
| C6 |
C3 |
C1 |
C4 |
179.9 |
180.0 |
| C3 |
C1 |
C4 |
C2 |
179.9 |
180.1 |
| C4 |
C1 |
C3 |
H3 |
359.9 |
360.0 |
| C4 |
C1 |
C2 |
H2 |
0.2 |
0.1 |
| H4 |
C4 |
C1 |
H4A |
120.4 |
120.0 |
| C8 |
C5 |
C2 |
C1 |
359.7 |
0.0 |
| C2 |
C5 |
C8 |
H5 |
180.0 |
180.3 |
| C8 |
C5 |
C2 |
H2 |
179.7 |
180.0 |
| C5 |
C8 |
C6 |
C3 |
0.0 |
0.0 |
| C6 |
C8 |
C5 |
O10 |
180.2 |
180.0 |
| C5 |
C8 |
C6 |
H6 |
180.0 |
180.0 |
| C5 |
C8 |
O10 |
HO10 |
251.6 |
90.0 |
| C4 |
C1 |
C2 |
C5 |
180.2 |
180.0 |
| C2 |
C5 |
C8 |
C6 |
0.1 |
360.0 |
| C2 |
C5 |
C8 |
O10 |
180.0 |
180.0 |
| C8 |
C5 |
C2 |
H5 |
180.0 |
179.7 |
| C3 |
C1 |
C2 |
C5 |
0.4 |
360.0 |
| C1 |
C2 |
C5 |
H2 |
180.0 |
180.1 |
| C6 |
C8 |
C5 |
C2 |
0.1 |
360.0 |
| C5 |
C8 |
C6 |
O10 |
179.8 |
180.0 |
| C6 |
C8 |
C5 |
H5 |
180.1 |
179.7 |
| C8 |
C6 |
C3 |
C1 |
0.1 |
360.0 |
| C3 |
C6 |
C8 |
H6 |
180.0 |
180.0 |
| C8 |
C6 |
C3 |
H3 |
180.1 |
180.0 |
| C6 |
C8 |
O10 |
HO10 |
71.4 |
270.0 |
| C4 |
C1 |
C3 |
C6 |
179.9 |
180.0 |
| C3 |
C6 |
C8 |
O10 |
180.2 |
180.0 |
| C8 |
C6 |
C3 |
H6 |
180.0 |
180.0 |
| C6 |
C3 |
C1 |
C2 |
359.8 |
0.0 |
| C1 |
C3 |
C6 |
H3 |
180.0 |
180.0 |
| N9 |
C7 |
C4 |
C1 |
187.3 |
180.0 |
| N9 |
C7 |
C4 |
H4 |
307.3 |
300.0 |
| N9 |
C7 |
C4 |
H4A |
67.7 |
60.1 |
| C4 |
C7 |
N9 |
H7 |
120.0 |
119.9 |
| C4 |
C7 |
N9 |
H7A |
241.1 |
240.0 |
| H7 |
C7 |
N9 |
H7A |
121.1 |
120.1 |
| HN9 |
N9 |
C7 |
HN9A |
240.0 |
236.1 |
| O10 |
C8 |
C5 |
C2 |
180.0 |
180.0 |
| C5 |
C8 |
O10 |
C6 |
180.2 |
180.0 |
| O10 |
C8 |
C5 |
H5 |
359.9 |
359.7 |
| O10 |
C8 |
C6 |
C3 |
180.2 |
180.0 |
| O10 |
C8 |
C6 |
H6 |
0.2 |
360.0 |
| C4 |
C1 |
C3 |
C2 |
180.1 |
179.9 |
| C3 |
C1 |
C4 |
H4 |
186.2 |
330.0 |
| C3 |
C1 |
C4 |
H4A |
65.8 |
210.0 |
| C5 |
C2 |
C1 |
C3 |
0.4 |
360.0 |
| C1 |
C3 |
C6 |
H6 |
180.0 |
180.0 |
| C6 |
C3 |
C1 |
H3 |
180.0 |
180.0 |
| C3 |
C1 |
C2 |
H2 |
180.4 |
180.0 |
| C4 |
C1 |
C2 |
C3 |
179.9 |
180.1 |
| C2 |
C1 |
C4 |
H4 |
6.4 |
150.0 |
| C2 |
C1 |
C4 |
H4A |
246.0 |
29.9 |
| C1 |
C2 |
C5 |
H5 |
179.7 |
180.3 |
| C5 |
C2 |
C1 |
H2 |
180.0 |
179.9 |
| C2 |
C1 |
C3 |
H3 |
179.7 |
180.0 |
| C7 |
C4 |
H4 |
C1 |
239.2 |
240.0 |
| H4 |
C4 |
C7 |
N9 |
307.3 |
300.0 |
| C7 |
C4 |
H4 |
H4A |
119.6 |
120.0 |
| H4 |
C4 |
C7 |
H7 |
67.3 |
60.0 |
| H4 |
C4 |
C7 |
H7A |
188.5 |
180.0 |
| H4 |
C4 |
C1 |
C3 |
186.2 |
330.0 |
| H4 |
C4 |
C1 |
C2 |
6.4 |
150.0 |
| C1 |
C4 |
H4 |
H4A |
240.4 |
240.0 |
| C7 |
C4 |
H4A |
C1 |
120.5 |
119.9 |
| H4A |
C4 |
C7 |
N9 |
67.7 |
60.1 |
| C7 |
C4 |
H4A |
H4 |
240.3 |
239.9 |
| H4A |
C4 |
C7 |
H7 |
187.7 |
180.0 |
| H4A |
C4 |
C7 |
H7A |
308.9 |
300.1 |
| H4A |
C4 |
C1 |
C3 |
65.8 |
210.0 |
| H4A |
C4 |
C1 |
C2 |
246.0 |
29.9 |
| C1 |
C4 |
H4A |
H4 |
119.8 |
120.0 |
| C8 |
C5 |
H5 |
C2 |
180.0 |
180.3 |
| H5 |
C5 |
C8 |
C6 |
180.1 |
179.7 |
| H5 |
C5 |
C8 |
O10 |
359.9 |
359.7 |
| H5 |
C5 |
C2 |
C1 |
179.7 |
180.3 |
| H5 |
C5 |
C2 |
H2 |
359.7 |
0.2 |
| C8 |
C6 |
H6 |
C3 |
180.0 |
180.0 |
| H6 |
C6 |
C8 |
O10 |
0.2 |
360.0 |
| H6 |
C6 |
C3 |
C1 |
180.0 |
180.0 |
| H6 |
C6 |
C3 |
H3 |
0.1 |
0.0 |
| H7 |
C7 |
C4 |
C1 |
307.3 |
300.0 |
| C4 |
C7 |
H7 |
N9 |
237.8 |
240.1 |
| H7 |
C7 |
C4 |
H4 |
67.3 |
60.0 |
| H7 |
C7 |
C4 |
H4A |
187.7 |
180.0 |
| C4 |
C7 |
H7 |
H7A |
118.9 |
120.0 |
| N9 |
C7 |
H7 |
H7A |
241.1 |
240.0 |
| H7 |
C7 |
N9 |
HN9 |
220.1 |
296.1 |
| H7 |
C7 |
N9 |
HN9A |
340.1 |
60.0 |
| H7A |
C7 |
C4 |
C1 |
68.5 |
60.0 |
| C4 |
C7 |
H7A |
N9 |
121.5 |
120.0 |
| H7A |
C7 |
C4 |
H4 |
188.5 |
180.0 |
| H7A |
C7 |
C4 |
H4A |
308.9 |
300.1 |
| C4 |
C7 |
H7A |
H7 |
240.7 |
240.0 |
| N9 |
C7 |
H7A |
H7 |
119.3 |
120.0 |
| H7A |
C7 |
N9 |
HN9 |
99.0 |
176.1 |
| H7A |
C7 |
N9 |
HN9A |
219.0 |
300.0 |
| C6 |
C3 |
H3 |
C1 |
180.0 |
180.0 |
| H3 |
C3 |
C6 |
H6 |
0.1 |
0.0 |
| H3 |
C3 |
C1 |
C2 |
179.7 |
180.0 |
| C5 |
C2 |
H2 |
C1 |
180.0 |
180.1 |
| H2 |
C2 |
C5 |
H5 |
359.7 |
0.2 |
| HN9 |
N9 |
C7 |
H7 |
220.1 |
296.1 |
| HN9 |
N9 |
C7 |
H7A |
99.0 |
176.1 |
| C7 |
N9 |
HN9 |
HN9A |
120.0 |
123.9 |
| HN9A |
N9 |
C7 |
H7 |
340.1 |
60.0 |
| HN9A |
N9 |
C7 |
H7A |
219.0 |
300.0 |
| C7 |
N9 |
HN9A |
HN9 |
240.0 |
236.1 |