PDB Chemical Component ADE
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for ADE
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
N9 |
C8 |
1.385 |
1.363 |
N9 |
C4 |
1.369 |
1.371 |
N9 |
HN9 |
1.019 |
0.971 |
C8 |
N7 |
1.322 |
1.302 |
C8 |
H8 |
1.103 |
1.079 |
N7 |
C5 |
1.379 |
1.354 |
C5 |
C6 |
1.397 |
1.403 |
C5 |
C4 |
1.385 |
1.405 |
C6 |
N6 |
1.347 |
1.384 |
C6 |
N1 |
1.350 |
1.329 |
N6 |
HN61 |
1.019 |
0.969 |
N6 |
HN62 |
1.019 |
0.970 |
N1 |
C2 |
1.338 |
1.320 |
C2 |
N3 |
1.333 |
1.316 |
C2 |
H2 |
1.104 |
1.080 |
N3 |
C4 |
1.348 |
1.329 |
Bond Angles for ADE
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C8 |
N9 |
C4 |
105.7 |
107.5 |
C8 |
N9 |
HN9 |
127.6 |
126.2 |
N9 |
C8 |
N7 |
113.7 |
109.9 |
N9 |
C8 |
H8 |
125.1 |
125.0 |
C4 |
N9 |
HN9 |
126.7 |
126.3 |
N9 |
C4 |
C5 |
105.6 |
106.0 |
N9 |
C4 |
N3 |
134.2 |
134.9 |
N7 |
C8 |
H8 |
121.1 |
125.0 |
C8 |
N7 |
C5 |
103.1 |
109.5 |
N7 |
C5 |
C6 |
127.2 |
134.7 |
N7 |
C5 |
C4 |
111.8 |
107.1 |
C6 |
C5 |
C4 |
120.9 |
118.2 |
C5 |
C6 |
N6 |
125.2 |
120.8 |
C5 |
C6 |
N1 |
117.3 |
118.5 |
C5 |
C4 |
N3 |
120.2 |
119.1 |
N6 |
C6 |
N1 |
117.5 |
120.7 |
C6 |
N6 |
HN61 |
125.2 |
120.1 |
C6 |
N6 |
HN62 |
106.7 |
120.0 |
C6 |
N1 |
C2 |
119.0 |
121.2 |
HN61 |
N6 |
HN62 |
106.7 |
120.0 |
N1 |
C2 |
N3 |
126.1 |
122.5 |
N1 |
C2 |
H2 |
117.2 |
118.8 |
N3 |
C2 |
H2 |
116.7 |
118.7 |
C2 |
N3 |
C4 |
116.5 |
120.6 |
Torsion Angles for ADE
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C4 |
N9 |
C8 |
HN9 |
180.0 |
180.0 |
C8 |
N9 |
C4 |
C5 |
1.9 |
0.2 |
C8 |
N9 |
C4 |
N3 |
184.0 |
180.0 |
N7 |
C8 |
N9 |
H8 |
180.0 |
180.1 |
N9 |
C8 |
N7 |
C5 |
358.4 |
359.8 |
C8 |
N9 |
C4 |
HN9 |
180.0 |
180.0 |
C4 |
N9 |
C8 |
N7 |
359.8 |
360.0 |
C4 |
N9 |
C8 |
H8 |
179.8 |
179.9 |
N7 |
C5 |
C4 |
N9 |
357.0 |
359.7 |
C6 |
C5 |
C4 |
N9 |
180.1 |
180.3 |
C5 |
C4 |
N9 |
N3 |
177.8 |
180.2 |
C2 |
N3 |
C4 |
N9 |
177.0 |
180.0 |
C8 |
N9 |
HN9 |
C4 |
180.0 |
180.0 |
HN9 |
N9 |
C8 |
N7 |
179.8 |
180.0 |
HN9 |
N9 |
C8 |
H8 |
359.8 |
359.9 |
HN9 |
N9 |
C4 |
C5 |
181.9 |
180.2 |
HN9 |
N9 |
C4 |
N3 |
4.0 |
-0.0 |
N7 |
C8 |
N9 |
C4 |
359.8 |
360.0 |
N7 |
C8 |
N9 |
HN9 |
179.8 |
180.0 |
N9 |
C8 |
N7 |
H8 |
180.0 |
179.9 |
C8 |
N7 |
C5 |
C6 |
179.5 |
179.6 |
C8 |
N7 |
C5 |
C4 |
2.8 |
0.4 |
H8 |
C8 |
N9 |
C4 |
179.8 |
179.9 |
H8 |
C8 |
N9 |
HN9 |
359.8 |
359.9 |
N9 |
C8 |
H8 |
N7 |
180.0 |
180.1 |
H8 |
C8 |
N7 |
C5 |
178.4 |
179.8 |
N9 |
C4 |
C5 |
N7 |
357.0 |
359.7 |
C5 |
N7 |
C8 |
H8 |
178.4 |
179.8 |
C6 |
C5 |
N7 |
C4 |
176.6 |
179.2 |
N7 |
C5 |
C6 |
N6 |
4.7 |
0.6 |
N7 |
C5 |
C6 |
N1 |
185.6 |
180.4 |
N7 |
C5 |
C4 |
N3 |
175.2 |
179.8 |
N9 |
C4 |
C5 |
C6 |
180.1 |
180.3 |
N7 |
C5 |
C6 |
C4 |
183.6 |
180.8 |
C6 |
C5 |
C4 |
N3 |
358.3 |
0.5 |
N6 |
C6 |
C5 |
N1 |
179.1 |
180.2 |
C5 |
C6 |
N6 |
HN61 |
180.0 |
179.8 |
C5 |
C6 |
N6 |
HN62 |
54.8 |
359.5 |
C5 |
C6 |
N1 |
C2 |
0.0 |
0.2 |
C5 |
C4 |
N9 |
HN9 |
181.9 |
180.2 |
N9 |
C4 |
C5 |
N3 |
181.8 |
179.8 |
N7 |
C5 |
C4 |
C6 |
176.9 |
179.4 |
C4 |
C5 |
C6 |
N6 |
181.0 |
179.8 |
C4 |
C5 |
C6 |
N1 |
2.0 |
359.5 |
C2 |
N3 |
C4 |
C5 |
359.4 |
359.8 |
N6 |
C6 |
C5 |
C4 |
181.0 |
179.8 |
C5 |
C6 |
N6 |
N1 |
180.9 |
179.8 |
N6 |
C6 |
N1 |
C2 |
180.9 |
180.0 |
HN61 |
N6 |
C6 |
HN62 |
125.2 |
180.3 |
N1 |
C6 |
C5 |
C4 |
2.0 |
359.5 |
C5 |
C6 |
N1 |
N6 |
179.1 |
180.2 |
N1 |
C6 |
N6 |
HN61 |
359.1 |
0.1 |
N1 |
C6 |
N6 |
HN62 |
233.8 |
179.7 |
C6 |
N1 |
C2 |
N3 |
357.5 |
-0.0 |
C6 |
N1 |
C2 |
H2 |
177.5 |
180.0 |
HN61 |
N6 |
C6 |
N1 |
359.1 |
0.1 |
C6 |
N6 |
HN61 |
HN62 |
234.8 |
179.7 |
HN62 |
N6 |
C6 |
N1 |
233.8 |
179.7 |
C6 |
N6 |
HN62 |
HN61 |
135.8 |
180.3 |
N3 |
C2 |
N1 |
H2 |
180.0 |
180.0 |
N1 |
C2 |
N3 |
C4 |
2.8 |
-0.0 |
N9 |
C4 |
N3 |
C2 |
177.0 |
180.0 |
C5 |
C4 |
N3 |
C2 |
359.4 |
359.8 |
N1 |
C2 |
N3 |
H2 |
180.0 |
180.0 |
N1 |
C2 |
H2 |
N3 |
180.0 |
180.0 |
H2 |
C2 |
N3 |
C4 |
182.8 |
180.0 |
N3 |
C4 |
N9 |
HN9 |
4.0 |
-0.0 |
N9 |
C4 |
N3 |
C5 |
177.6 |
180.2 |
C4 |
N3 |
C2 |
H2 |
182.8 |
180.0 |