PDB Chemical Component ABQ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for ABQ
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C11 |
C1 |
1.391 |
1.383 |
C1 |
C3 |
1.376 |
1.381 |
C1 |
H1 |
1.080 |
1.079 |
C11 |
C2 |
1.407 |
1.382 |
C2 |
C4 |
1.400 |
1.382 |
C2 |
H2 |
1.080 |
1.080 |
C3 |
C12 |
1.386 |
1.385 |
C3 |
H3 |
1.080 |
1.081 |
C4 |
C12 |
1.376 |
1.384 |
C4 |
H4 |
1.080 |
1.081 |
N25 |
C5 |
1.370 |
1.322 |
C5 |
C13 |
1.372 |
1.393 |
C5 |
H5 |
1.080 |
1.080 |
C6 |
C15 |
1.382 |
1.397 |
C6 |
N25 |
1.352 |
1.320 |
C6 |
H6 |
1.080 |
1.080 |
C10 |
C7 |
1.396 |
1.367 |
C7 |
N29 |
1.377 |
1.356 |
C7 |
H7 |
1.080 |
1.080 |
N27 |
C8 |
1.328 |
1.320 |
C8 |
N26 |
1.319 |
1.316 |
C8 |
H8 |
1.080 |
1.080 |
C10 |
C9 |
1.458 |
1.472 |
C16 |
C9 |
1.395 |
1.400 |
C9 |
C14 |
1.393 |
1.404 |
C17 |
C10 |
1.468 |
1.468 |
C20 |
C11 |
1.496 |
1.507 |
C12 |
F34 |
1.349 |
1.351 |
N28 |
C13 |
1.354 |
1.331 |
C13 |
C17 |
1.495 |
1.482 |
C14 |
N29 |
1.392 |
1.371 |
C14 |
N26 |
1.341 |
1.332 |
N31 |
C15 |
1.413 |
1.389 |
C15 |
N28 |
1.351 |
1.324 |
N30 |
C16 |
1.389 |
1.384 |
C16 |
N27 |
1.347 |
1.332 |
O32 |
C17 |
1.252 |
1.216 |
O33 |
C18 |
1.451 |
1.444 |
C18 |
C20 |
1.525 |
1.550 |
C18 |
H18 |
1.100 |
1.090 |
C18 |
H18A |
1.100 |
1.090 |
C19 |
O33 |
1.450 |
1.437 |
C19 |
C21 |
1.531 |
1.541 |
C19 |
H19 |
1.100 |
1.090 |
C19 |
H19A |
1.100 |
1.090 |
C21 |
C20 |
1.558 |
1.548 |
C20 |
H20 |
1.100 |
1.090 |
C21 |
N31 |
1.467 |
1.465 |
C21 |
H21 |
1.100 |
1.090 |
C24 |
C22 |
1.546 |
1.530 |
C22 |
H22 |
1.100 |
1.090 |
C22 |
H22A |
1.100 |
1.090 |
C22 |
H22B |
1.100 |
1.090 |
C23 |
C24 |
1.524 |
1.530 |
C23 |
H23 |
1.100 |
1.090 |
C23 |
H23A |
1.100 |
1.089 |
C23 |
H23B |
1.100 |
1.090 |
N29 |
C24 |
1.474 |
1.465 |
C24 |
H24 |
1.100 |
1.090 |
N30 |
HN30 |
0.999 |
0.969 |
N30 |
HN3A |
1.000 |
0.970 |
N31 |
HN31 |
0.999 |
0.970 |
Bond Angles for ABQ
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C11 |
C1 |
H1 |
120.6 |
120.0 |
C3 |
C1 |
H1 |
120.5 |
120.0 |
C1 |
C3 |
C12 |
119.8 |
120.0 |
C1 |
C3 |
H3 |
120.1 |
120.0 |
C11 |
C2 |
H2 |
120.0 |
120.0 |
C4 |
C2 |
H2 |
120.0 |
120.0 |
C2 |
C4 |
C12 |
117.5 |
120.0 |
C2 |
C4 |
H4 |
121.3 |
120.0 |
C12 |
C3 |
H3 |
120.1 |
120.0 |
C3 |
C12 |
C4 |
122.9 |
119.9 |
C3 |
C12 |
F34 |
116.3 |
120.0 |
C12 |
C4 |
H4 |
121.2 |
120.0 |
C4 |
C12 |
F34 |
120.8 |
120.0 |
N25 |
C5 |
H5 |
119.3 |
119.9 |
C13 |
C5 |
H5 |
119.3 |
120.0 |
C5 |
C13 |
C17 |
120.7 |
120.0 |
C15 |
C6 |
N25 |
124.1 |
120.1 |
C15 |
C6 |
H6 |
117.9 |
119.9 |
C6 |
C15 |
N28 |
121.1 |
119.9 |
N25 |
C6 |
H6 |
117.9 |
119.9 |
C10 |
C7 |
N29 |
110.0 |
109.6 |
C10 |
C7 |
H7 |
125.0 |
125.2 |
N29 |
C7 |
H7 |
125.0 |
125.2 |
C7 |
N29 |
C14 |
108.8 |
110.6 |
C7 |
N29 |
C24 |
128.3 |
124.7 |
N27 |
C8 |
H8 |
115.4 |
118.7 |
N26 |
C8 |
H8 |
115.4 |
118.6 |
C8 |
N26 |
C14 |
111.0 |
120.7 |
C10 |
C9 |
C14 |
107.7 |
106.1 |
C9 |
C14 |
N29 |
108.2 |
107.5 |
C9 |
C14 |
N26 |
127.0 |
118.5 |
N26 |
C14 |
N29 |
124.8 |
134.1 |
C14 |
N29 |
C24 |
122.9 |
124.7 |
O33 |
C18 |
H18 |
110.7 |
110.6 |
O33 |
C18 |
H18A |
110.6 |
110.7 |
C20 |
C18 |
H18 |
110.6 |
110.6 |
C20 |
C18 |
H18A |
110.6 |
110.6 |
C18 |
C20 |
H20 |
111.6 |
111.0 |
H18 |
C18 |
H18A |
108.3 |
110.6 |
C21 |
C19 |
O33 |
111.3 |
107.3 |
O33 |
C19 |
H19 |
108.9 |
109.8 |
O33 |
C19 |
H19A |
108.9 |
109.9 |
C21 |
C19 |
H19 |
108.9 |
109.9 |
C21 |
C19 |
H19A |
108.9 |
109.9 |
C19 |
C21 |
C20 |
101.3 |
104.2 |
C19 |
C21 |
N31 |
104.6 |
110.5 |
C19 |
C21 |
H21 |
119.3 |
110.4 |
H19 |
C19 |
H19A |
110.0 |
110.0 |
C21 |
C20 |
H20 |
110.0 |
110.9 |
N31 |
C21 |
H21 |
107.1 |
110.6 |
C21 |
N31 |
HN31 |
106.3 |
120.0 |
C24 |
C22 |
H22 |
109.5 |
109.5 |
C24 |
C22 |
H22A |
109.5 |
109.5 |
C24 |
C22 |
H22B |
109.4 |
109.5 |
H22 |
C22 |
H22A |
109.5 |
109.4 |
H22 |
C22 |
H22B |
109.4 |
109.5 |
H22A |
C22 |
H22B |
109.5 |
109.5 |
C24 |
C23 |
H23 |
109.5 |
109.5 |
C24 |
C23 |
H23A |
109.5 |
109.5 |
C24 |
C23 |
H23B |
109.4 |
109.5 |
C23 |
C24 |
H24 |
112.6 |
109.5 |
H23 |
C23 |
H23A |
109.4 |
109.5 |
H23 |
C23 |
H23B |
109.5 |
109.4 |
H23A |
C23 |
H23B |
109.5 |
109.5 |
N29 |
C24 |
H24 |
113.9 |
109.4 |
HN30 |
N30 |
HN3A |
109.5 |
120.0 |
Torsion Angles for ABQ
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C3 |
C1 |
C11 |
H1 |
180.0 |
179.8 |
C11 |
C1 |
C3 |
C12 |
0.9 |
0.3 |
C11 |
C1 |
C3 |
H3 |
180.9 |
180.2 |
C11 |
C1 |
C3 |
H1 |
180.0 |
180.2 |
C12 |
C3 |
C1 |
H3 |
180.0 |
180.1 |
C1 |
C3 |
C12 |
C4 |
359.3 |
0.0 |
C1 |
C3 |
C12 |
F34 |
177.9 |
180.0 |
H1 |
C1 |
C3 |
C12 |
180.9 |
180.0 |
H1 |
C1 |
C3 |
H3 |
0.9 |
360.0 |
C2 |
C11 |
C1 |
H1 |
179.6 |
180.3 |
C4 |
C2 |
C11 |
H2 |
180.0 |
179.1 |
C11 |
C2 |
C4 |
C12 |
0.7 |
0.9 |
C11 |
C2 |
C4 |
H4 |
180.7 |
180.9 |
C11 |
C2 |
C4 |
H2 |
180.0 |
180.9 |
C3 |
C12 |
C4 |
C2 |
359.9 |
359.4 |
C12 |
C4 |
C2 |
H4 |
180.0 |
180.0 |
C2 |
C4 |
C12 |
F34 |
181.3 |
179.4 |
H2 |
C2 |
C4 |
C12 |
180.7 |
180.0 |
H2 |
C2 |
C4 |
H4 |
0.7 |
360.0 |
C12 |
C3 |
C1 |
H1 |
180.9 |
180.0 |
C1 |
C3 |
C12 |
H3 |
180.0 |
179.9 |
C2 |
C4 |
C12 |
C3 |
359.9 |
359.4 |
C3 |
C12 |
C4 |
H4 |
179.9 |
179.4 |
C4 |
C12 |
C3 |
F34 |
181.4 |
180.0 |
H3 |
C3 |
C1 |
H1 |
0.9 |
360.0 |
C1 |
C3 |
H3 |
C12 |
180.0 |
180.1 |
H3 |
C3 |
C12 |
C4 |
179.3 |
180.1 |
H3 |
C3 |
C12 |
F34 |
357.9 |
0.1 |
C12 |
C4 |
C2 |
H2 |
180.7 |
180.0 |
C2 |
C4 |
C12 |
H4 |
180.0 |
180.0 |
C4 |
C12 |
C3 |
H3 |
179.3 |
180.1 |
C3 |
C12 |
C4 |
F34 |
178.5 |
180.0 |
H4 |
C4 |
C2 |
H2 |
0.7 |
360.0 |
C2 |
C4 |
H4 |
C12 |
180.0 |
180.0 |
H4 |
C4 |
C12 |
F34 |
1.3 |
359.5 |
C13 |
C5 |
N25 |
H5 |
180.0 |
179.7 |
N25 |
C5 |
C13 |
H5 |
180.0 |
180.3 |
H5 |
C5 |
C13 |
C17 |
359.5 |
0.0 |
N25 |
C6 |
C15 |
H6 |
180.0 |
180.8 |
C6 |
N25 |
C5 |
H5 |
179.3 |
180.2 |
C15 |
C6 |
N25 |
H6 |
180.0 |
179.2 |
N25 |
C6 |
C15 |
N28 |
358.1 |
0.8 |
C15 |
C6 |
H6 |
N25 |
180.0 |
180.8 |
H6 |
C6 |
C15 |
N28 |
178.1 |
180.0 |
N29 |
C7 |
C10 |
H7 |
180.0 |
180.3 |
C10 |
C7 |
N29 |
C14 |
0.2 |
359.7 |
C10 |
C7 |
N29 |
C24 |
178.3 |
179.8 |
C10 |
C7 |
N29 |
H7 |
180.0 |
179.7 |
C9 |
C14 |
N29 |
C7 |
359.7 |
0.4 |
N26 |
C14 |
N29 |
C7 |
179.1 |
180.0 |
C14 |
N29 |
C7 |
C24 |
181.9 |
180.0 |
C7 |
N29 |
C24 |
H24 |
142.1 |
180.0 |
C10 |
C7 |
H7 |
N29 |
180.0 |
180.4 |
H7 |
C7 |
N29 |
C14 |
180.2 |
180.1 |
H7 |
C7 |
N29 |
C24 |
358.3 |
0.1 |
N26 |
C8 |
N27 |
H8 |
180.0 |
180.8 |
N27 |
C8 |
N26 |
H8 |
180.0 |
179.2 |
C9 |
C14 |
N26 |
C8 |
358.6 |
0.0 |
C8 |
N26 |
C14 |
N29 |
179.3 |
180.5 |
H8 |
C8 |
N26 |
C14 |
181.3 |
180.0 |
C9 |
C10 |
C7 |
N29 |
360.0 |
0.0 |
C9 |
C10 |
C7 |
H7 |
180.0 |
179.7 |
C10 |
C9 |
C14 |
N29 |
0.2 |
359.7 |
C10 |
C9 |
C14 |
N26 |
180.9 |
180.0 |
C16 |
C9 |
C14 |
N29 |
181.3 |
180.0 |
C16 |
C9 |
C14 |
N26 |
1.9 |
0.3 |
C7 |
N29 |
C14 |
C9 |
359.7 |
0.4 |
C8 |
N26 |
C14 |
C9 |
358.6 |
0.0 |
N26 |
C14 |
C9 |
N29 |
180.6 |
180.3 |
C9 |
C14 |
N29 |
C24 |
181.5 |
180.4 |
C5 |
C13 |
C17 |
C10 |
210.9 |
185.3 |
C17 |
C10 |
C7 |
N29 |
183.8 |
180.1 |
C17 |
C10 |
C7 |
H7 |
3.8 |
359.7 |
C20 |
C11 |
C1 |
H1 |
358.0 |
0.3 |
C20 |
C11 |
C2 |
H2 |
1.3 |
0.3 |
F34 |
C12 |
C3 |
H3 |
357.9 |
0.1 |
C3 |
C12 |
F34 |
C4 |
181.4 |
180.0 |
F34 |
C12 |
C4 |
H4 |
1.3 |
359.5 |
N28 |
C13 |
C5 |
H5 |
179.5 |
180.0 |
C6 |
C15 |
N28 |
C13 |
0.6 |
359.5 |
C17 |
C13 |
C5 |
H5 |
359.5 |
0.0 |
C14 |
N29 |
C7 |
H7 |
180.2 |
180.1 |
C7 |
N29 |
C14 |
C24 |
178.2 |
180.0 |
C9 |
C14 |
N29 |
N26 |
180.6 |
180.4 |
C14 |
N29 |
C24 |
H24 |
320.0 |
0.0 |
C7 |
N29 |
C14 |
N26 |
179.1 |
180.0 |
C14 |
N26 |
C8 |
H8 |
181.3 |
180.0 |
C9 |
C14 |
N26 |
N29 |
179.3 |
179.6 |
N26 |
C14 |
N29 |
C24 |
0.9 |
360.0 |
N31 |
C15 |
C6 |
H6 |
356.0 |
359.1 |
N28 |
C15 |
C6 |
N25 |
358.1 |
0.8 |
N28 |
C15 |
C6 |
H6 |
178.1 |
180.0 |
C16 |
N27 |
C8 |
H8 |
178.2 |
180.4 |
C20 |
C18 |
O33 |
H18 |
240.0 |
118.5 |
C20 |
C18 |
O33 |
H18A |
120.0 |
241.5 |
O33 |
C18 |
C20 |
H20 |
268.6 |
278.8 |
H18 |
C18 |
O33 |
H18A |
240.0 |
123.0 |
O33 |
C18 |
C20 |
H18 |
120.0 |
241.5 |
O33 |
C18 |
C20 |
H18A |
240.0 |
118.6 |
H18 |
C18 |
C20 |
H18A |
120.0 |
237.1 |
C19 |
C21 |
C20 |
C18 |
338.5 |
339.1 |
C21 |
C20 |
C18 |
H20 |
119.7 |
118.3 |
O33 |
C18 |
H18 |
H18A |
121.4 |
236.9 |
C20 |
C18 |
H18 |
H18A |
238.6 |
122.9 |
H18 |
C18 |
C20 |
H20 |
148.6 |
37.2 |
O33 |
C18 |
H18A |
H18 |
238.6 |
123.0 |
C20 |
C18 |
H18A |
H18 |
121.4 |
237.1 |
H18A |
C18 |
C20 |
H20 |
28.6 |
160.1 |
C19 |
O33 |
C18 |
H18 |
96.6 |
201.5 |
C19 |
O33 |
C18 |
H18A |
216.7 |
78.5 |
C21 |
C19 |
O33 |
H19 |
240.0 |
119.4 |
C21 |
C19 |
O33 |
H19A |
120.0 |
240.5 |
O33 |
C19 |
C21 |
C20 |
7.9 |
358.0 |
O33 |
C19 |
C21 |
N31 |
248.5 |
239.3 |
O33 |
C19 |
C21 |
H21 |
128.9 |
116.7 |
H19 |
C19 |
O33 |
H19A |
240.0 |
121.2 |
O33 |
C19 |
C21 |
H19 |
120.0 |
240.7 |
O33 |
C19 |
C21 |
H19A |
240.0 |
119.4 |
H19 |
C19 |
C21 |
H19A |
120.0 |
238.8 |
C19 |
C21 |
C20 |
H20 |
99.3 |
97.4 |
N31 |
C21 |
C19 |
H21 |
119.6 |
122.6 |
C19 |
C21 |
N31 |
HN31 |
89.7 |
94.3 |
C21 |
C19 |
H19 |
O33 |
121.5 |
242.2 |
O33 |
C19 |
H19 |
H19A |
119.3 |
238.9 |
C21 |
C19 |
H19 |
H19A |
240.8 |
121.1 |
H19 |
C19 |
C21 |
C20 |
247.9 |
117.4 |
H19 |
C19 |
C21 |
N31 |
128.5 |
358.6 |
H19 |
C19 |
C21 |
H21 |
8.9 |
236.0 |
C21 |
C19 |
H19A |
O33 |
238.5 |
117.9 |
O33 |
C19 |
H19A |
H19 |
240.7 |
121.0 |
C21 |
C19 |
H19A |
H19 |
119.3 |
238.9 |
H19A |
C19 |
C21 |
C20 |
127.9 |
238.6 |
H19A |
C19 |
C21 |
N31 |
8.5 |
119.9 |
H19A |
C19 |
C21 |
H21 |
248.9 |
357.2 |
C21 |
C20 |
C18 |
H18 |
268.4 |
155.5 |
C21 |
C20 |
C18 |
H18A |
148.4 |
278.4 |
C18 |
C20 |
C21 |
H20 |
239.2 |
241.7 |
C20 |
C21 |
C19 |
O33 |
7.9 |
358.0 |
C20 |
C21 |
C19 |
H19 |
247.9 |
117.4 |
C20 |
C21 |
C19 |
H19A |
127.9 |
238.6 |
C19 |
C21 |
C20 |
N31 |
248.0 |
241.3 |
C19 |
C21 |
C20 |
H21 |
127.2 |
118.6 |
H20 |
C20 |
C18 |
H18 |
148.6 |
37.2 |
H20 |
C20 |
C18 |
H18A |
28.6 |
160.1 |
N31 |
C21 |
C19 |
O33 |
248.5 |
239.3 |
N31 |
C21 |
C19 |
H19 |
128.5 |
358.6 |
N31 |
C21 |
C19 |
H19A |
8.5 |
119.9 |
C19 |
C21 |
N31 |
C20 |
110.0 |
114.8 |
C19 |
C21 |
N31 |
H21 |
232.5 |
237.4 |
N31 |
C21 |
C20 |
H20 |
211.2 |
216.1 |
H21 |
C21 |
C19 |
O33 |
128.9 |
116.7 |
H21 |
C21 |
C19 |
H19 |
8.9 |
236.0 |
H21 |
C21 |
C19 |
H19A |
248.9 |
357.2 |
C19 |
C21 |
H21 |
C20 |
243.6 |
245.3 |
C19 |
C21 |
H21 |
N31 |
118.3 |
122.6 |
H21 |
C21 |
C20 |
H20 |
332.0 |
338.8 |
H21 |
C21 |
N31 |
HN31 |
217.3 |
216.8 |
C7 |
N29 |
C24 |
C22 |
23.3 |
300.0 |
C14 |
N29 |
C24 |
C22 |
201.1 |
120.0 |
H22 |
C22 |
C24 |
H22A |
240.0 |
240.1 |
H22 |
C22 |
C24 |
H22B |
120.0 |
120.0 |
H22A |
C22 |
C24 |
H22B |
240.0 |
239.9 |
C24 |
C22 |
H22 |
H22A |
120.0 |
119.9 |
C24 |
C22 |
H22 |
H22B |
240.0 |
239.9 |
H22A |
C22 |
H22 |
H22B |
120.0 |
120.0 |
C24 |
C22 |
H22A |
H22 |
240.0 |
240.0 |
C24 |
C22 |
H22A |
H22B |
120.0 |
120.1 |
H22 |
C22 |
H22A |
H22B |
240.0 |
240.0 |
C24 |
C22 |
H22B |
H22 |
120.0 |
120.0 |
C24 |
C22 |
H22B |
H22A |
240.0 |
240.0 |
H22 |
C22 |
H22B |
H22A |
120.0 |
119.9 |
C7 |
N29 |
C24 |
C23 |
264.4 |
60.0 |
C14 |
N29 |
C24 |
C23 |
82.3 |
240.0 |
C23 |
C24 |
C22 |
H22 |
180.0 |
180.0 |
C23 |
C24 |
C22 |
H22A |
300.0 |
299.9 |
C23 |
C24 |
C22 |
H22B |
60.0 |
60.0 |
H23 |
C23 |
C24 |
H23A |
240.0 |
240.0 |
H23 |
C23 |
C24 |
H23B |
120.0 |
120.0 |
H23A |
C23 |
C24 |
H23B |
240.0 |
240.0 |
N29 |
C24 |
C23 |
H24 |
236.8 |
120.0 |
C24 |
C23 |
H23 |
H23A |
120.0 |
120.0 |
C24 |
C23 |
H23 |
H23B |
240.0 |
240.0 |
H23 |
C23 |
C24 |
H24 |
61.2 |
180.0 |
H23A |
C23 |
H23 |
H23B |
120.0 |
120.0 |
C24 |
C23 |
H23A |
H23 |
240.0 |
240.0 |
C24 |
C23 |
H23A |
H23B |
120.0 |
120.0 |
H23A |
C23 |
C24 |
H24 |
181.1 |
300.0 |
H23 |
C23 |
H23A |
H23B |
240.0 |
240.0 |
C24 |
C23 |
H23B |
H23 |
120.0 |
120.0 |
C24 |
C23 |
H23B |
H23A |
240.0 |
240.0 |
H23B |
C23 |
C24 |
H24 |
301.1 |
60.0 |
H23 |
C23 |
H23B |
H23A |
120.0 |
120.0 |
C24 |
N29 |
C7 |
H7 |
358.3 |
0.1 |
C7 |
N29 |
C24 |
C14 |
182.2 |
180.0 |
N29 |
C24 |
C22 |
H22 |
66.3 |
300.1 |
N29 |
C24 |
C22 |
H22A |
186.3 |
60.0 |
N29 |
C24 |
C22 |
H22B |
306.4 |
180.1 |
N29 |
C24 |
C23 |
H23 |
297.9 |
300.0 |
N29 |
C24 |
C23 |
H23A |
57.9 |
59.9 |
N29 |
C24 |
C23 |
H23B |
177.9 |
180.0 |
C23 |
C24 |
N29 |
H24 |
122.3 |
240.0 |
H24 |
C24 |
C22 |
H22 |
302.7 |
60.0 |
H24 |
C24 |
C22 |
H22A |
62.7 |
179.9 |
H24 |
C24 |
C22 |
H22B |
182.8 |
300.0 |
H24 |
C24 |
C23 |
H23 |
61.2 |
180.0 |
H24 |
C24 |
C23 |
H23A |
181.1 |
300.0 |
H24 |
C24 |
C23 |
H23B |
301.1 |
60.0 |
HN31 |
N31 |
C21 |
H21 |
217.3 |
216.8 |