PDB Chemical Component ABJ
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for ABJ
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C20 |
C14 |
1.524 |
1.524 |
| C14 |
C19 |
1.529 |
1.529 |
| C14 |
N11 |
1.477 |
1.477 |
| N11 |
N15 |
1.234 |
1.234 |
| N11 |
C7 |
1.344 |
1.344 |
| N15 |
C13 |
1.338 |
1.338 |
| C7 |
N3 |
1.351 |
1.351 |
| C7 |
C4 |
1.401 |
1.401 |
| N3 |
C6 |
1.319 |
1.319 |
| C6 |
N5 |
1.338 |
1.338 |
| N5 |
C2 |
1.341 |
1.341 |
| C2 |
N1 |
1.318 |
1.318 |
| C2 |
C4 |
1.397 |
1.397 |
| C4 |
C13 |
1.401 |
1.401 |
| C13 |
C18 |
1.397 |
1.397 |
| C18 |
C28 |
1.402 |
1.402 |
| C18 |
C27 |
1.391 |
1.391 |
| C28 |
C29 |
1.403 |
1.403 |
| C27 |
C30 |
1.400 |
1.400 |
| C30 |
C26 |
1.388 |
1.388 |
| C26 |
C29 |
1.392 |
1.392 |
| C29 |
O33 |
1.358 |
1.358 |
| C20 |
H201 |
1.100 |
1.100 |
| C20 |
H202 |
1.100 |
1.100 |
| C20 |
H203 |
1.100 |
1.101 |
| C14 |
H14 |
1.100 |
1.101 |
| C19 |
H191 |
1.100 |
1.100 |
| C19 |
H192 |
1.100 |
1.100 |
| C19 |
H193 |
1.100 |
1.100 |
| C6 |
H6 |
1.080 |
1.080 |
| N1 |
H11N |
1.000 |
1.000 |
| N1 |
H12N |
1.000 |
1.000 |
| C28 |
H28 |
1.080 |
1.080 |
| C27 |
H27 |
1.080 |
1.080 |
| C30 |
H30 |
1.080 |
1.080 |
| C26 |
H26 |
1.080 |
1.080 |
| O33 |
H33 |
0.950 |
0.950 |
Bond Angles for ABJ
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C20 |
C14 |
N11 |
110.4 |
110.4 |
| C20 |
C14 |
H14 |
109.3 |
109.3 |
| C14 |
C19 |
H191 |
109.5 |
109.5 |
| C14 |
C19 |
H192 |
109.5 |
109.5 |
| C14 |
C19 |
H193 |
109.4 |
109.5 |
| C14 |
N11 |
N15 |
122.3 |
122.3 |
| C14 |
N11 |
C7 |
126.3 |
126.3 |
| N11 |
C14 |
H14 |
108.9 |
108.9 |
| N15 |
N11 |
C7 |
111.4 |
111.4 |
| N11 |
N15 |
C13 |
111.4 |
111.4 |
| N11 |
C7 |
N3 |
134.2 |
134.2 |
| N11 |
C7 |
C4 |
106.4 |
106.4 |
| N15 |
C13 |
C4 |
106.6 |
106.6 |
| N15 |
C13 |
C18 |
125.4 |
125.4 |
| N3 |
C7 |
C4 |
119.4 |
119.4 |
| C7 |
N3 |
C6 |
120.9 |
120.9 |
| C7 |
C4 |
C2 |
118.2 |
118.2 |
| C7 |
C4 |
C13 |
104.3 |
104.3 |
| N3 |
C6 |
N5 |
121.0 |
121.0 |
| N3 |
C6 |
H6 |
119.5 |
119.5 |
| C6 |
N5 |
C2 |
121.8 |
121.8 |
| N5 |
C6 |
H6 |
119.5 |
119.5 |
| N5 |
C2 |
N1 |
118.6 |
118.6 |
| N5 |
C2 |
C4 |
118.7 |
118.7 |
| N1 |
C2 |
C4 |
122.7 |
122.7 |
| C2 |
N1 |
H11N |
109.5 |
109.5 |
| C2 |
N1 |
H12N |
109.5 |
109.5 |
| C2 |
C4 |
C13 |
137.6 |
137.6 |
| C4 |
C13 |
C18 |
128.0 |
128.0 |
| C13 |
C18 |
C28 |
120.8 |
120.8 |
| C13 |
C18 |
C27 |
120.9 |
120.9 |
| C28 |
C18 |
C27 |
118.3 |
118.3 |
| C18 |
C28 |
C29 |
120.8 |
120.8 |
| C18 |
C28 |
H28 |
119.6 |
119.6 |
| C18 |
C27 |
C30 |
120.9 |
120.9 |
| C18 |
C27 |
H27 |
119.6 |
119.6 |
| C28 |
C29 |
C26 |
120.2 |
120.2 |
| C28 |
C29 |
O33 |
121.0 |
121.0 |
| C29 |
C28 |
H28 |
119.6 |
119.6 |
| C27 |
C30 |
C26 |
120.7 |
120.7 |
| C30 |
C27 |
H27 |
119.6 |
119.6 |
| C27 |
C30 |
H30 |
119.7 |
119.7 |
| C30 |
C26 |
C29 |
119.1 |
119.1 |
| C26 |
C30 |
H30 |
119.7 |
119.6 |
| C30 |
C26 |
H26 |
120.5 |
120.4 |
| C26 |
C29 |
O33 |
118.8 |
118.8 |
| C29 |
C26 |
H26 |
120.4 |
120.5 |
| C29 |
O33 |
H33 |
109.5 |
109.5 |
| H201 |
C20 |
H202 |
109.5 |
109.5 |
| H201 |
C20 |
H203 |
109.5 |
109.4 |
| H202 |
C20 |
H203 |
109.5 |
109.5 |
| H191 |
C19 |
H192 |
109.4 |
109.4 |
| H191 |
C19 |
H193 |
109.5 |
109.5 |
| H192 |
C19 |
H193 |
109.5 |
109.5 |
| H11N |
N1 |
H12N |
109.4 |
109.5 |
Torsion Angles for ABJ
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C20 |
C14 |
C19 |
H191 |
227.0 |
227.0 |
| C20 |
C14 |
C19 |
H192 |
347.0 |
347.0 |
| C20 |
C14 |
C19 |
H193 |
107.0 |
107.0 |
| C20 |
C14 |
N11 |
N15 |
335.2 |
335.2 |
| C20 |
C14 |
N11 |
C7 |
157.5 |
157.5 |
| N11 |
C14 |
C20 |
H14 |
240.3 |
240.3 |
| H191 |
C19 |
C14 |
H192 |
240.0 |
240.0 |
| H191 |
C19 |
C14 |
H193 |
120.0 |
120.0 |
| H192 |
C19 |
C14 |
H193 |
240.0 |
240.0 |
| C20 |
C14 |
N11 |
H14 |
120.0 |
119.9 |
| N11 |
C14 |
C19 |
H191 |
106.6 |
106.6 |
| N11 |
C14 |
C19 |
H192 |
226.6 |
226.6 |
| N11 |
C14 |
C19 |
H193 |
346.6 |
346.6 |
| N15 |
N11 |
C14 |
C7 |
177.7 |
177.7 |
| C14 |
N11 |
N15 |
C13 |
181.6 |
181.6 |
| C14 |
N11 |
C7 |
N3 |
357.9 |
357.9 |
| C14 |
N11 |
C7 |
C4 |
179.1 |
179.1 |
| C14 |
N11 |
N15 |
C7 |
182.0 |
182.0 |
| N15 |
N11 |
C14 |
H14 |
215.2 |
215.3 |
| N15 |
N11 |
C7 |
N3 |
180.0 |
180.0 |
| N15 |
N11 |
C7 |
C4 |
1.1 |
1.1 |
| N11 |
N15 |
C13 |
C4 |
359.4 |
359.4 |
| N11 |
N15 |
C13 |
C18 |
181.5 |
181.5 |
| C14 |
N11 |
C7 |
N15 |
177.9 |
177.9 |
| C7 |
N11 |
C14 |
H14 |
37.5 |
37.5 |
| C7 |
N11 |
N15 |
C13 |
359.6 |
359.6 |
| N3 |
C7 |
N11 |
C4 |
178.9 |
178.9 |
| N11 |
C7 |
N3 |
C6 |
181.1 |
181.1 |
| N11 |
C7 |
C4 |
C2 |
179.5 |
179.5 |
| N11 |
C7 |
C4 |
C13 |
358.6 |
358.6 |
| C13 |
N15 |
N11 |
C7 |
359.6 |
359.6 |
| C7 |
C4 |
C13 |
N15 |
1.2 |
1.2 |
| C2 |
C4 |
C13 |
N15 |
180.1 |
180.1 |
| C4 |
C13 |
N15 |
C18 |
178.0 |
178.0 |
| N15 |
C13 |
C18 |
C28 |
312.2 |
312.2 |
| N15 |
C13 |
C18 |
C27 |
129.4 |
129.4 |
| N11 |
C7 |
N3 |
C4 |
181.3 |
181.3 |
| N3 |
C7 |
C4 |
C2 |
0.4 |
0.4 |
| N3 |
C7 |
C4 |
C13 |
179.5 |
179.5 |
| C7 |
N3 |
C6 |
N5 |
0.2 |
0.2 |
| C7 |
N3 |
C6 |
H6 |
180.2 |
180.2 |
| N11 |
C7 |
C4 |
N3 |
179.1 |
179.1 |
| N15 |
C13 |
C4 |
C7 |
1.2 |
1.2 |
| C4 |
C7 |
N3 |
C6 |
359.8 |
359.8 |
| N5 |
C2 |
C4 |
C7 |
359.4 |
359.4 |
| N1 |
C2 |
C4 |
C7 |
179.5 |
179.5 |
| C2 |
C4 |
C7 |
C13 |
180.9 |
180.9 |
| C7 |
C4 |
C13 |
C18 |
179.1 |
179.1 |
| C6 |
N3 |
C7 |
C4 |
359.8 |
359.8 |
| N3 |
C6 |
N5 |
C2 |
359.6 |
359.6 |
| N5 |
C6 |
N3 |
H6 |
180.0 |
180.0 |
| N3 |
C6 |
N5 |
H6 |
180.0 |
180.0 |
| C6 |
N5 |
C2 |
N1 |
180.6 |
180.6 |
| C6 |
N5 |
C2 |
C4 |
0.6 |
0.6 |
| C7 |
C4 |
C2 |
N5 |
359.4 |
359.4 |
| C2 |
N5 |
C6 |
H6 |
179.6 |
179.6 |
| N1 |
C2 |
N5 |
C4 |
179.9 |
179.9 |
| N5 |
C2 |
N1 |
H11N |
293.9 |
293.8 |
| N5 |
C2 |
N1 |
H12N |
53.9 |
53.9 |
| N5 |
C2 |
C4 |
C13 |
180.6 |
180.6 |
| C7 |
C4 |
C2 |
N1 |
179.5 |
179.5 |
| N5 |
C2 |
N1 |
C4 |
180.1 |
180.1 |
| N1 |
C2 |
C4 |
C13 |
0.7 |
0.7 |
| H11N |
N1 |
C2 |
H12N |
240.1 |
240.0 |
| N15 |
C13 |
C4 |
C2 |
180.1 |
180.1 |
| C7 |
C4 |
C2 |
C13 |
178.8 |
178.8 |
| N5 |
C2 |
C4 |
N1 |
179.9 |
179.9 |
| C4 |
C2 |
N1 |
H11N |
113.9 |
113.8 |
| C4 |
C2 |
N1 |
H12N |
233.8 |
233.8 |
| C2 |
C4 |
C13 |
C18 |
358.0 |
358.0 |
| N15 |
C13 |
C4 |
C18 |
182.1 |
182.1 |
| C7 |
C4 |
C13 |
C2 |
181.1 |
181.1 |
| C4 |
C13 |
C18 |
C28 |
134.7 |
134.7 |
| C4 |
C13 |
C18 |
C27 |
311.9 |
311.9 |
| N15 |
C13 |
C18 |
C4 |
177.5 |
177.5 |
| C28 |
C18 |
C13 |
C27 |
182.8 |
182.8 |
| C13 |
C18 |
C28 |
C29 |
178.1 |
178.1 |
| C13 |
C18 |
C28 |
H28 |
358.1 |
358.1 |
| C13 |
C18 |
C27 |
C30 |
181.6 |
181.6 |
| C13 |
C18 |
C27 |
H27 |
1.6 |
1.6 |
| C13 |
C18 |
C28 |
C27 |
177.2 |
177.2 |
| C28 |
C18 |
C27 |
C30 |
358.8 |
358.8 |
| C28 |
C18 |
C27 |
H27 |
178.8 |
178.8 |
| C18 |
C28 |
C29 |
C26 |
359.7 |
359.7 |
| C18 |
C28 |
C29 |
O33 |
179.1 |
179.1 |
| C29 |
C28 |
C18 |
H28 |
180.0 |
180.0 |
| C13 |
C18 |
C27 |
C28 |
182.8 |
182.8 |
| C27 |
C18 |
C28 |
C29 |
0.9 |
0.9 |
| C27 |
C18 |
C28 |
H28 |
180.9 |
180.9 |
| C18 |
C27 |
C30 |
C26 |
0.9 |
0.9 |
| C30 |
C27 |
C18 |
H27 |
180.0 |
180.0 |
| C18 |
C27 |
C30 |
H30 |
180.8 |
180.9 |
| C29 |
C28 |
C18 |
C27 |
0.9 |
0.9 |
| C18 |
C28 |
C29 |
H28 |
180.0 |
180.0 |
| C30 |
C26 |
C29 |
C28 |
359.9 |
359.9 |
| C26 |
C29 |
C28 |
O33 |
180.6 |
180.6 |
| C28 |
C29 |
C26 |
H26 |
179.9 |
179.9 |
| C28 |
C29 |
O33 |
H33 |
329.9 |
329.9 |
| C18 |
C27 |
C30 |
H27 |
180.0 |
180.0 |
| C27 |
C30 |
C26 |
C29 |
359.8 |
359.8 |
| C26 |
C30 |
C27 |
H30 |
180.0 |
180.0 |
| C27 |
C30 |
C26 |
H26 |
179.8 |
179.8 |
| C28 |
C29 |
C26 |
C30 |
359.9 |
359.9 |
| C26 |
C30 |
C27 |
H27 |
180.9 |
180.9 |
| C27 |
C30 |
C26 |
H30 |
180.0 |
180.0 |
| C30 |
C26 |
C29 |
O33 |
180.5 |
180.5 |
| C29 |
C26 |
C30 |
H26 |
180.0 |
180.0 |
| C28 |
C29 |
C26 |
O33 |
179.4 |
179.4 |
| C26 |
C29 |
C28 |
H28 |
179.8 |
179.8 |
| C29 |
C26 |
C30 |
H30 |
179.8 |
179.8 |
| C30 |
C26 |
C29 |
H26 |
180.0 |
180.0 |
| C26 |
C29 |
O33 |
H33 |
149.4 |
149.4 |
| C28 |
C29 |
O33 |
C26 |
180.6 |
180.6 |
| O33 |
C29 |
C28 |
H28 |
359.2 |
359.2 |
| O33 |
C29 |
C26 |
H26 |
0.5 |
0.5 |
| H201 |
C20 |
C14 |
N11 |
95.3 |
95.3 |
| H201 |
C20 |
C14 |
H14 |
215.0 |
215.0 |
| H202 |
C20 |
H201 |
H203 |
120.0 |
120.0 |
| H202 |
C20 |
C14 |
N11 |
215.3 |
215.3 |
| H202 |
C20 |
C14 |
H14 |
335.0 |
335.0 |
| H201 |
C20 |
H202 |
H203 |
240.0 |
240.0 |
| H203 |
C20 |
C14 |
N11 |
335.3 |
335.3 |
| H203 |
C20 |
C14 |
H14 |
95.0 |
95.0 |
| H201 |
C20 |
H203 |
H202 |
120.0 |
120.0 |
| C20 |
C14 |
H14 |
N11 |
239.3 |
239.4 |
| H14 |
C14 |
C19 |
H191 |
346.9 |
347.0 |
| H14 |
C14 |
C19 |
H192 |
106.9 |
106.9 |
| H14 |
C14 |
C19 |
H193 |
226.9 |
226.9 |
| H14 |
C14 |
N11 |
N15 |
215.2 |
215.3 |
| H14 |
C14 |
N11 |
C7 |
37.5 |
37.5 |
| C14 |
C19 |
H191 |
H192 |
120.0 |
120.0 |
| C14 |
C19 |
H191 |
H193 |
240.0 |
240.0 |
| H192 |
C19 |
H191 |
H193 |
120.0 |
120.0 |
| C14 |
C19 |
H192 |
H191 |
240.0 |
240.0 |
| C14 |
C19 |
H192 |
H193 |
120.0 |
120.0 |
| H191 |
C19 |
H192 |
H193 |
240.0 |
240.0 |
| C14 |
C19 |
H193 |
H191 |
120.0 |
120.0 |
| C14 |
C19 |
H193 |
H192 |
240.0 |
240.0 |
| H191 |
C19 |
H193 |
H192 |
120.0 |
120.0 |
| N3 |
C6 |
H6 |
N5 |
180.0 |
180.0 |
| H6 |
C6 |
N5 |
C2 |
179.6 |
179.6 |
| H11N |
N1 |
C2 |
C4 |
113.9 |
113.8 |
| C2 |
N1 |
H11N |
H12N |
120.0 |
120.0 |
| H12N |
N1 |
C2 |
C4 |
233.8 |
233.8 |
| C2 |
N1 |
H12N |
H11N |
240.0 |
240.0 |
| H28 |
C28 |
C18 |
C27 |
180.9 |
180.9 |
| C18 |
C28 |
H28 |
C29 |
180.0 |
180.0 |
| H28 |
C28 |
C29 |
C26 |
179.8 |
179.8 |
| H28 |
C28 |
C29 |
O33 |
359.2 |
359.2 |
| C18 |
C27 |
H27 |
C30 |
180.0 |
180.0 |
| H27 |
C27 |
C30 |
C26 |
180.9 |
180.9 |
| H27 |
C27 |
C30 |
H30 |
0.8 |
0.9 |
| C27 |
C30 |
H30 |
C26 |
180.0 |
180.0 |
| H30 |
C30 |
C27 |
H27 |
0.8 |
0.9 |
| H30 |
C30 |
C26 |
C29 |
179.8 |
179.8 |
| H30 |
C30 |
C26 |
H26 |
359.8 |
359.7 |
| C30 |
C26 |
H26 |
C29 |
180.0 |
180.0 |
| H26 |
C26 |
C30 |
H30 |
359.8 |
359.7 |
| H26 |
C26 |
C29 |
O33 |
0.5 |
0.5 |