PDB Chemical Component ABE
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for ABE
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C1 |
C2 |
1.513 |
1.530 |
C1 |
O1 |
1.452 |
1.428 |
C1 |
O5 |
1.413 |
1.425 |
C1 |
H1 |
1.114 |
1.090 |
C2 |
C3 |
1.527 |
1.533 |
C2 |
O2 |
1.414 |
1.429 |
C2 |
H2 |
1.115 |
1.089 |
C3 |
C4 |
1.532 |
1.532 |
C3 |
H31 |
1.115 |
1.090 |
C3 |
H32 |
1.115 |
1.090 |
C4 |
C5 |
1.530 |
1.529 |
C4 |
O4 |
1.433 |
1.428 |
C4 |
H4 |
1.115 |
1.090 |
C5 |
C6 |
1.539 |
1.530 |
C5 |
O5 |
1.433 |
1.426 |
C5 |
H5 |
1.115 |
1.090 |
C6 |
H61 |
1.115 |
1.090 |
C6 |
H62 |
1.115 |
1.090 |
C6 |
H63 |
1.115 |
1.090 |
O1 |
HO1 |
0.950 |
0.967 |
O2 |
HO2 |
0.950 |
0.967 |
O4 |
HO4 |
0.951 |
0.967 |
Bond Angles for ABE
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C2 |
C1 |
O1 |
107.7 |
109.3 |
C2 |
C1 |
O5 |
112.9 |
109.8 |
C2 |
C1 |
H1 |
109.0 |
109.4 |
C1 |
C2 |
C3 |
110.0 |
109.0 |
C1 |
C2 |
O2 |
107.4 |
109.6 |
C1 |
C2 |
H2 |
110.9 |
109.6 |
O1 |
C1 |
O5 |
111.1 |
109.4 |
O1 |
C1 |
H1 |
110.9 |
109.4 |
C1 |
O1 |
HO1 |
107.6 |
106.8 |
O5 |
C1 |
H1 |
105.3 |
109.4 |
C1 |
O5 |
C5 |
116.3 |
107.6 |
C3 |
C2 |
O2 |
110.7 |
109.6 |
C3 |
C2 |
H2 |
107.6 |
109.5 |
C2 |
C3 |
C4 |
108.0 |
108.6 |
C2 |
C3 |
H31 |
112.8 |
109.6 |
C2 |
C3 |
H32 |
112.8 |
109.6 |
O2 |
C2 |
H2 |
110.3 |
109.5 |
C2 |
O2 |
HO2 |
107.3 |
106.8 |
C4 |
C3 |
H31 |
112.7 |
109.7 |
C4 |
C3 |
H32 |
112.7 |
109.6 |
C3 |
C4 |
C5 |
109.3 |
109.0 |
C3 |
C4 |
O4 |
110.4 |
109.5 |
C3 |
C4 |
H4 |
109.3 |
109.5 |
H31 |
C3 |
H32 |
97.7 |
109.7 |
C5 |
C4 |
O4 |
110.1 |
109.7 |
C5 |
C4 |
H4 |
109.5 |
109.5 |
C4 |
C5 |
C6 |
111.2 |
109.4 |
C4 |
C5 |
O5 |
108.1 |
109.8 |
C4 |
C5 |
H5 |
109.1 |
109.4 |
O4 |
C4 |
H4 |
108.3 |
109.6 |
C4 |
O4 |
HO4 |
110.4 |
106.8 |
C6 |
C5 |
O5 |
108.9 |
109.4 |
C6 |
C5 |
H5 |
108.2 |
109.4 |
C5 |
C6 |
H61 |
111.2 |
109.5 |
C5 |
C6 |
H62 |
111.6 |
109.5 |
C5 |
C6 |
H63 |
111.6 |
109.5 |
O5 |
C5 |
H5 |
111.4 |
109.4 |
H61 |
C6 |
H62 |
111.5 |
109.4 |
H61 |
C6 |
H63 |
111.5 |
109.5 |
H62 |
C6 |
H63 |
98.7 |
109.5 |
Torsion Angles for ABE
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O1 |
C1 |
C2 |
O5 |
237.0 |
239.9 |
O1 |
C1 |
C2 |
H1 |
120.3 |
119.9 |
C2 |
C1 |
O1 |
HO1 |
180.0 |
180.3 |
O5 |
C1 |
C2 |
H1 |
243.3 |
239.9 |
C2 |
C1 |
O5 |
C5 |
306.0 |
292.4 |
C3 |
C2 |
C1 |
O2 |
239.5 |
240.0 |
C3 |
C2 |
C1 |
H2 |
118.9 |
119.8 |
C1 |
C2 |
C3 |
C4 |
304.4 |
306.3 |
C1 |
C2 |
C3 |
H31 |
69.7 |
66.1 |
C1 |
C2 |
C3 |
H32 |
179.2 |
186.5 |
O2 |
C2 |
C1 |
H2 |
239.4 |
239.8 |
C1 |
C2 |
O2 |
HO2 |
180.0 |
60.0 |
C2 |
C1 |
O1 |
O5 |
124.0 |
120.3 |
C2 |
C1 |
O1 |
H1 |
240.8 |
240.2 |
O1 |
C1 |
C2 |
C3 |
288.7 |
301.2 |
O1 |
C1 |
C2 |
O2 |
49.2 |
61.1 |
O1 |
C1 |
C2 |
H2 |
169.7 |
181.4 |
O5 |
C1 |
O1 |
H1 |
116.8 |
119.9 |
O1 |
C1 |
O5 |
C5 |
67.0 |
52.5 |
C2 |
C1 |
O5 |
O1 |
239.0 |
240.0 |
C2 |
C1 |
O5 |
H1 |
118.8 |
120.1 |
O5 |
C1 |
C2 |
C3 |
51.7 |
61.2 |
O5 |
C1 |
C2 |
O2 |
172.1 |
181.2 |
O5 |
C1 |
C2 |
H2 |
292.7 |
301.4 |
O1 |
C1 |
O5 |
H1 |
239.9 |
240.1 |
O5 |
C1 |
O1 |
HO1 |
55.9 |
60.0 |
C4 |
C5 |
O5 |
C1 |
57.2 |
67.6 |
C6 |
C5 |
O5 |
C1 |
178.1 |
187.7 |
C1 |
O5 |
C5 |
H5 |
297.3 |
307.5 |
C2 |
C1 |
H1 |
O1 |
118.3 |
119.8 |
C2 |
C1 |
H1 |
O5 |
238.6 |
239.7 |
H1 |
C1 |
C2 |
C3 |
168.3 |
181.3 |
H1 |
C1 |
C2 |
O2 |
288.8 |
301.3 |
H1 |
C1 |
C2 |
H2 |
49.4 |
61.5 |
O1 |
C1 |
H1 |
O5 |
120.3 |
119.9 |
H1 |
C1 |
O1 |
HO1 |
299.1 |
300.1 |
H1 |
C1 |
O5 |
C5 |
187.1 |
172.3 |
C3 |
C2 |
C1 |
O1 |
288.7 |
301.2 |
C3 |
C2 |
C1 |
O5 |
51.7 |
61.2 |
C3 |
C2 |
C1 |
H1 |
168.3 |
181.3 |
C1 |
C2 |
C3 |
O2 |
118.5 |
119.9 |
C1 |
C2 |
C3 |
H2 |
239.0 |
240.1 |
O2 |
C2 |
C3 |
H2 |
120.6 |
120.2 |
C3 |
C2 |
O2 |
HO2 |
300.0 |
179.5 |
C4 |
C3 |
C2 |
H31 |
234.8 |
240.2 |
C4 |
C3 |
C2 |
H32 |
125.2 |
119.8 |
C2 |
C3 |
C4 |
C5 |
60.7 |
53.8 |
C2 |
C3 |
C4 |
O4 |
299.5 |
293.7 |
C2 |
C3 |
C4 |
H4 |
180.5 |
173.6 |
H31 |
C3 |
C2 |
H32 |
250.4 |
239.6 |
O2 |
C2 |
C1 |
O1 |
49.2 |
61.1 |
O2 |
C2 |
C1 |
O5 |
172.1 |
181.2 |
O2 |
C2 |
C1 |
H1 |
288.8 |
301.3 |
C1 |
C2 |
O2 |
C3 |
240.0 |
240.4 |
C1 |
C2 |
O2 |
H2 |
121.0 |
120.2 |
C3 |
C2 |
O2 |
H2 |
241.0 |
239.8 |
O2 |
C2 |
C3 |
C4 |
186.0 |
186.3 |
O2 |
C2 |
C3 |
H31 |
311.2 |
306.1 |
O2 |
C2 |
C3 |
H32 |
60.8 |
66.6 |
H2 |
C2 |
C1 |
O1 |
169.7 |
181.4 |
H2 |
C2 |
C1 |
O5 |
292.7 |
301.4 |
H2 |
C2 |
C1 |
H1 |
49.4 |
61.5 |
C1 |
C2 |
H2 |
C3 |
120.4 |
119.5 |
C1 |
C2 |
H2 |
O2 |
241.2 |
239.8 |
C3 |
C2 |
H2 |
O2 |
120.8 |
120.3 |
H2 |
C2 |
C3 |
C4 |
65.4 |
66.1 |
H2 |
C2 |
C3 |
H31 |
190.6 |
185.9 |
H2 |
C2 |
C3 |
H32 |
300.2 |
306.4 |
H2 |
C2 |
O2 |
HO2 |
59.0 |
299.7 |
C4 |
C3 |
C2 |
O2 |
186.0 |
186.3 |
C4 |
C3 |
C2 |
H2 |
65.4 |
66.1 |
C2 |
C3 |
C4 |
H31 |
125.3 |
119.8 |
C2 |
C3 |
C4 |
H32 |
234.7 |
240.3 |
H31 |
C3 |
C4 |
H32 |
109.4 |
120.5 |
C5 |
C4 |
C3 |
O4 |
121.2 |
120.0 |
C5 |
C4 |
C3 |
H4 |
240.2 |
240.2 |
C3 |
C4 |
C5 |
C6 |
180.7 |
178.6 |
C3 |
C4 |
C5 |
O5 |
300.2 |
298.7 |
C3 |
C4 |
C5 |
H5 |
61.5 |
58.8 |
O4 |
C4 |
C3 |
H4 |
119.0 |
120.2 |
C3 |
C4 |
O4 |
HO4 |
180.0 |
300.0 |
H31 |
C3 |
C2 |
O2 |
311.2 |
306.1 |
H31 |
C3 |
C2 |
H2 |
190.6 |
185.9 |
C2 |
C3 |
H31 |
C4 |
237.3 |
240.8 |
C2 |
C3 |
H31 |
H32 |
118.7 |
120.4 |
C4 |
C3 |
H31 |
H32 |
241.4 |
239.5 |
H31 |
C3 |
C4 |
C5 |
295.4 |
294.0 |
H31 |
C3 |
C4 |
O4 |
174.2 |
174.0 |
H31 |
C3 |
C4 |
H4 |
55.2 |
53.8 |
H32 |
C3 |
C2 |
O2 |
60.8 |
66.6 |
H32 |
C3 |
C2 |
H2 |
300.2 |
306.4 |
C2 |
C3 |
H32 |
C4 |
122.6 |
119.1 |
C2 |
C3 |
H32 |
H31 |
241.2 |
239.6 |
C4 |
C3 |
H32 |
H31 |
118.6 |
120.5 |
H32 |
C3 |
C4 |
C5 |
186.0 |
173.5 |
H32 |
C3 |
C4 |
O4 |
64.8 |
53.5 |
H32 |
C3 |
C4 |
H4 |
305.8 |
293.3 |
C1 |
O5 |
C5 |
C4 |
57.2 |
67.6 |
C5 |
C4 |
C3 |
H31 |
295.4 |
294.0 |
C5 |
C4 |
C3 |
H32 |
186.0 |
173.5 |
C3 |
C4 |
C5 |
O4 |
238.6 |
240.1 |
C3 |
C4 |
C5 |
H4 |
119.6 |
119.8 |
O4 |
C4 |
C5 |
H4 |
241.0 |
239.7 |
C5 |
C4 |
O4 |
HO4 |
59.3 |
180.4 |
C6 |
C5 |
C4 |
O5 |
240.5 |
239.9 |
C6 |
C5 |
C4 |
H5 |
119.3 |
119.8 |
C4 |
C5 |
C6 |
H61 |
180.0 |
180.2 |
C4 |
C5 |
C6 |
H62 |
305.2 |
300.1 |
C4 |
C5 |
C6 |
H63 |
54.7 |
60.2 |
O5 |
C5 |
C4 |
H5 |
238.8 |
239.9 |
O4 |
C4 |
C3 |
H31 |
174.2 |
174.0 |
O4 |
C4 |
C3 |
H32 |
64.8 |
53.5 |
C3 |
C4 |
O4 |
C5 |
120.7 |
119.6 |
C3 |
C4 |
O4 |
H4 |
240.4 |
239.9 |
C5 |
C4 |
O4 |
H4 |
119.7 |
120.3 |
O4 |
C4 |
C5 |
C6 |
302.1 |
298.5 |
O4 |
C4 |
C5 |
O5 |
61.6 |
58.6 |
O4 |
C4 |
C5 |
H5 |
182.8 |
178.7 |
H4 |
C4 |
C3 |
H31 |
55.2 |
53.8 |
H4 |
C4 |
C3 |
H32 |
305.8 |
293.3 |
C3 |
C4 |
H4 |
C5 |
240.4 |
240.5 |
C3 |
C4 |
H4 |
O4 |
120.3 |
120.1 |
C5 |
C4 |
H4 |
O4 |
239.9 |
239.6 |
H4 |
C4 |
C5 |
C6 |
61.1 |
58.8 |
H4 |
C4 |
C5 |
O5 |
180.6 |
178.9 |
H4 |
C4 |
C5 |
H5 |
301.8 |
299.0 |
H4 |
C4 |
O4 |
HO4 |
299.6 |
60.1 |
C1 |
O5 |
C5 |
C6 |
178.1 |
187.7 |
C6 |
C5 |
C4 |
O4 |
302.1 |
298.5 |
C6 |
C5 |
C4 |
H4 |
61.1 |
58.8 |
C4 |
C5 |
C6 |
O5 |
119.0 |
120.3 |
C4 |
C5 |
C6 |
H5 |
240.2 |
240.2 |
O5 |
C5 |
C6 |
H5 |
121.2 |
119.9 |
H61 |
C6 |
C5 |
H62 |
234.8 |
240.1 |
H61 |
C6 |
C5 |
H63 |
125.3 |
120.1 |
H62 |
C6 |
C5 |
H63 |
250.5 |
240.0 |
C5 |
O5 |
C1 |
H1 |
187.1 |
172.3 |
O5 |
C5 |
C4 |
O4 |
61.6 |
58.6 |
O5 |
C5 |
C4 |
H4 |
180.6 |
178.9 |
C4 |
C5 |
O5 |
C6 |
239.1 |
239.9 |
C4 |
C5 |
O5 |
H5 |
119.8 |
120.1 |
C6 |
C5 |
O5 |
H5 |
240.7 |
240.2 |
O5 |
C5 |
C6 |
H61 |
61.0 |
59.9 |
O5 |
C5 |
C6 |
H62 |
186.2 |
179.8 |
O5 |
C5 |
C6 |
H63 |
295.7 |
299.8 |
H5 |
C5 |
C4 |
O4 |
182.8 |
178.7 |
H5 |
C5 |
C4 |
H4 |
301.8 |
299.0 |
C4 |
C5 |
H5 |
C6 |
121.1 |
119.8 |
C4 |
C5 |
H5 |
O5 |
240.7 |
239.7 |
C6 |
C5 |
H5 |
O5 |
119.7 |
119.9 |
H5 |
C5 |
C6 |
H61 |
299.8 |
300.1 |
H5 |
C5 |
C6 |
H62 |
65.0 |
60.0 |
H5 |
C5 |
C6 |
H63 |
174.5 |
180.0 |
H61 |
C6 |
C5 |
O5 |
61.0 |
59.9 |
H61 |
C6 |
C5 |
H5 |
299.8 |
300.1 |
C5 |
C6 |
H61 |
H62 |
125.3 |
120.0 |
C5 |
C6 |
H61 |
H63 |
234.6 |
239.9 |
H62 |
C6 |
H61 |
H63 |
109.3 |
120.0 |
H62 |
C6 |
C5 |
O5 |
186.2 |
179.8 |
H62 |
C6 |
C5 |
H5 |
65.0 |
60.0 |
C5 |
C6 |
H62 |
H61 |
234.9 |
240.1 |
C5 |
C6 |
H62 |
H63 |
117.5 |
120.0 |
H61 |
C6 |
H62 |
H63 |
242.6 |
240.0 |
H63 |
C6 |
C5 |
O5 |
295.7 |
299.8 |
H63 |
C6 |
C5 |
H5 |
174.5 |
180.0 |
C5 |
C6 |
H63 |
H61 |
125.1 |
120.0 |
C5 |
C6 |
H63 |
H62 |
242.5 |
240.0 |
H61 |
C6 |
H63 |
H62 |
117.4 |
119.9 |
HO1 |
O1 |
C1 |
O5 |
55.9 |
60.0 |
HO1 |
O1 |
C1 |
H1 |
299.1 |
300.1 |
HO2 |
O2 |
C2 |
H2 |
59.0 |
299.7 |
HO4 |
O4 |
C4 |
H4 |
299.6 |
60.1 |