PDB Chemical Component ABE

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for ABE

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C1 C2 1.513 1.530
C1 O1 1.452 1.428
C1 O5 1.413 1.425
C1 H1 1.114 1.090
C2 C3 1.527 1.533
C2 O2 1.414 1.429
C2 H2 1.115 1.089
C3 C4 1.532 1.532
C3 H31 1.115 1.090
C3 H32 1.115 1.090
C4 C5 1.530 1.529
C4 O4 1.433 1.428
C4 H4 1.115 1.090
C5 C6 1.539 1.530
C5 O5 1.433 1.426
C5 H5 1.115 1.090
C6 H61 1.115 1.090
C6 H62 1.115 1.090
C6 H63 1.115 1.090
O1 HO1 0.950 0.967
O2 HO2 0.950 0.967
O4 HO4 0.951 0.967

Bond Angles for ABE

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C2 C1 O1 107.7 109.3
C2 C1 O5 112.9 109.8
C2 C1 H1 109.0 109.4
C1 C2 C3 110.0 109.0
C1 C2 O2 107.4 109.6
C1 C2 H2 110.9 109.6
O1 C1 O5 111.1 109.4
O1 C1 H1 110.9 109.4
C1 O1 HO1 107.6 106.8
O5 C1 H1 105.3 109.4
C1 O5 C5 116.3 107.6
C3 C2 O2 110.7 109.6
C3 C2 H2 107.6 109.5
C2 C3 C4 108.0 108.6
C2 C3 H31 112.8 109.6
C2 C3 H32 112.8 109.6
O2 C2 H2 110.3 109.5
C2 O2 HO2 107.3 106.8
C4 C3 H31 112.7 109.7
C4 C3 H32 112.7 109.6
C3 C4 C5 109.3 109.0
C3 C4 O4 110.4 109.5
C3 C4 H4 109.3 109.5
H31 C3 H32 97.7 109.7
C5 C4 O4 110.1 109.7
C5 C4 H4 109.5 109.5
C4 C5 C6 111.2 109.4
C4 C5 O5 108.1 109.8
C4 C5 H5 109.1 109.4
O4 C4 H4 108.3 109.6
C4 O4 HO4 110.4 106.8
C6 C5 O5 108.9 109.4
C6 C5 H5 108.2 109.4
C5 C6 H61 111.2 109.5
C5 C6 H62 111.6 109.5
C5 C6 H63 111.6 109.5
O5 C5 H5 111.4 109.4
H61 C6 H62 111.5 109.4
H61 C6 H63 111.5 109.5
H62 C6 H63 98.7 109.5

Torsion Angles for ABE

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
O1 C1 C2 O5 237.0 239.9
O1 C1 C2 H1 120.3 119.9
C2 C1 O1 HO1 180.0 180.3
O5 C1 C2 H1 243.3 239.9
C2 C1 O5 C5 306.0 292.4
C3 C2 C1 O2 239.5 240.0
C3 C2 C1 H2 118.9 119.8
C1 C2 C3 C4 304.4 306.3
C1 C2 C3 H31 69.7 66.1
C1 C2 C3 H32 179.2 186.5
O2 C2 C1 H2 239.4 239.8
C1 C2 O2 HO2 180.0 60.0
C2 C1 O1 O5 124.0 120.3
C2 C1 O1 H1 240.8 240.2
O1 C1 C2 C3 288.7 301.2
O1 C1 C2 O2 49.2 61.1
O1 C1 C2 H2 169.7 181.4
O5 C1 O1 H1 116.8 119.9
O1 C1 O5 C5 67.0 52.5
C2 C1 O5 O1 239.0 240.0
C2 C1 O5 H1 118.8 120.1
O5 C1 C2 C3 51.7 61.2
O5 C1 C2 O2 172.1 181.2
O5 C1 C2 H2 292.7 301.4
O1 C1 O5 H1 239.9 240.1
O5 C1 O1 HO1 55.9 60.0
C4 C5 O5 C1 57.2 67.6
C6 C5 O5 C1 178.1 187.7
C1 O5 C5 H5 297.3 307.5
C2 C1 H1 O1 118.3 119.8
C2 C1 H1 O5 238.6 239.7
H1 C1 C2 C3 168.3 181.3
H1 C1 C2 O2 288.8 301.3
H1 C1 C2 H2 49.4 61.5
O1 C1 H1 O5 120.3 119.9
H1 C1 O1 HO1 299.1 300.1
H1 C1 O5 C5 187.1 172.3
C3 C2 C1 O1 288.7 301.2
C3 C2 C1 O5 51.7 61.2
C3 C2 C1 H1 168.3 181.3
C1 C2 C3 O2 118.5 119.9
C1 C2 C3 H2 239.0 240.1
O2 C2 C3 H2 120.6 120.2
C3 C2 O2 HO2 300.0 179.5
C4 C3 C2 H31 234.8 240.2
C4 C3 C2 H32 125.2 119.8
C2 C3 C4 C5 60.7 53.8
C2 C3 C4 O4 299.5 293.7
C2 C3 C4 H4 180.5 173.6
H31 C3 C2 H32 250.4 239.6
O2 C2 C1 O1 49.2 61.1
O2 C2 C1 O5 172.1 181.2
O2 C2 C1 H1 288.8 301.3
C1 C2 O2 C3 240.0 240.4
C1 C2 O2 H2 121.0 120.2
C3 C2 O2 H2 241.0 239.8
O2 C2 C3 C4 186.0 186.3
O2 C2 C3 H31 311.2 306.1
O2 C2 C3 H32 60.8 66.6
H2 C2 C1 O1 169.7 181.4
H2 C2 C1 O5 292.7 301.4
H2 C2 C1 H1 49.4 61.5
C1 C2 H2 C3 120.4 119.5
C1 C2 H2 O2 241.2 239.8
C3 C2 H2 O2 120.8 120.3
H2 C2 C3 C4 65.4 66.1
H2 C2 C3 H31 190.6 185.9
H2 C2 C3 H32 300.2 306.4
H2 C2 O2 HO2 59.0 299.7
C4 C3 C2 O2 186.0 186.3
C4 C3 C2 H2 65.4 66.1
C2 C3 C4 H31 125.3 119.8
C2 C3 C4 H32 234.7 240.3
H31 C3 C4 H32 109.4 120.5
C5 C4 C3 O4 121.2 120.0
C5 C4 C3 H4 240.2 240.2
C3 C4 C5 C6 180.7 178.6
C3 C4 C5 O5 300.2 298.7
C3 C4 C5 H5 61.5 58.8
O4 C4 C3 H4 119.0 120.2
C3 C4 O4 HO4 180.0 300.0
H31 C3 C2 O2 311.2 306.1
H31 C3 C2 H2 190.6 185.9
C2 C3 H31 C4 237.3 240.8
C2 C3 H31 H32 118.7 120.4
C4 C3 H31 H32 241.4 239.5
H31 C3 C4 C5 295.4 294.0
H31 C3 C4 O4 174.2 174.0
H31 C3 C4 H4 55.2 53.8
H32 C3 C2 O2 60.8 66.6
H32 C3 C2 H2 300.2 306.4
C2 C3 H32 C4 122.6 119.1
C2 C3 H32 H31 241.2 239.6
C4 C3 H32 H31 118.6 120.5
H32 C3 C4 C5 186.0 173.5
H32 C3 C4 O4 64.8 53.5
H32 C3 C4 H4 305.8 293.3
C1 O5 C5 C4 57.2 67.6
C5 C4 C3 H31 295.4 294.0
C5 C4 C3 H32 186.0 173.5
C3 C4 C5 O4 238.6 240.1
C3 C4 C5 H4 119.6 119.8
O4 C4 C5 H4 241.0 239.7
C5 C4 O4 HO4 59.3 180.4
C6 C5 C4 O5 240.5 239.9
C6 C5 C4 H5 119.3 119.8
C4 C5 C6 H61 180.0 180.2
C4 C5 C6 H62 305.2 300.1
C4 C5 C6 H63 54.7 60.2
O5 C5 C4 H5 238.8 239.9
O4 C4 C3 H31 174.2 174.0
O4 C4 C3 H32 64.8 53.5
C3 C4 O4 C5 120.7 119.6
C3 C4 O4 H4 240.4 239.9
C5 C4 O4 H4 119.7 120.3
O4 C4 C5 C6 302.1 298.5
O4 C4 C5 O5 61.6 58.6
O4 C4 C5 H5 182.8 178.7
H4 C4 C3 H31 55.2 53.8
H4 C4 C3 H32 305.8 293.3
C3 C4 H4 C5 240.4 240.5
C3 C4 H4 O4 120.3 120.1
C5 C4 H4 O4 239.9 239.6
H4 C4 C5 C6 61.1 58.8
H4 C4 C5 O5 180.6 178.9
H4 C4 C5 H5 301.8 299.0
H4 C4 O4 HO4 299.6 60.1
C1 O5 C5 C6 178.1 187.7
C6 C5 C4 O4 302.1 298.5
C6 C5 C4 H4 61.1 58.8
C4 C5 C6 O5 119.0 120.3
C4 C5 C6 H5 240.2 240.2
O5 C5 C6 H5 121.2 119.9
H61 C6 C5 H62 234.8 240.1
H61 C6 C5 H63 125.3 120.1
H62 C6 C5 H63 250.5 240.0
C5 O5 C1 H1 187.1 172.3
O5 C5 C4 O4 61.6 58.6
O5 C5 C4 H4 180.6 178.9
C4 C5 O5 C6 239.1 239.9
C4 C5 O5 H5 119.8 120.1
C6 C5 O5 H5 240.7 240.2
O5 C5 C6 H61 61.0 59.9
O5 C5 C6 H62 186.2 179.8
O5 C5 C6 H63 295.7 299.8
H5 C5 C4 O4 182.8 178.7
H5 C5 C4 H4 301.8 299.0
C4 C5 H5 C6 121.1 119.8
C4 C5 H5 O5 240.7 239.7
C6 C5 H5 O5 119.7 119.9
H5 C5 C6 H61 299.8 300.1
H5 C5 C6 H62 65.0 60.0
H5 C5 C6 H63 174.5 180.0
H61 C6 C5 O5 61.0 59.9
H61 C6 C5 H5 299.8 300.1
C5 C6 H61 H62 125.3 120.0
C5 C6 H61 H63 234.6 239.9
H62 C6 H61 H63 109.3 120.0
H62 C6 C5 O5 186.2 179.8
H62 C6 C5 H5 65.0 60.0
C5 C6 H62 H61 234.9 240.1
C5 C6 H62 H63 117.5 120.0
H61 C6 H62 H63 242.6 240.0
H63 C6 C5 O5 295.7 299.8
H63 C6 C5 H5 174.5 180.0
C5 C6 H63 H61 125.1 120.0
C5 C6 H63 H62 242.5 240.0
H61 C6 H63 H62 117.4 119.9
HO1 O1 C1 O5 55.9 60.0
HO1 O1 C1 H1 299.1 300.1
HO2 O2 C2 H2 59.0 299.7
HO4 O4 C4 H4 299.6 60.1