PDB Chemical Component AB9

Ideal Model

Chemical Description

Name (2R)-4-AMINO-N-{(1R,2S,3R,4R,5S)-5-AMINO-2-{2-[(2-AMINOETHYL)AMINO]ETHOXY}-4-[(2,6-DIAMINO-2,6-DIDEOXY-ALPHA-D-GLUCOPYRANOSYL)OXY]-3-HYDROXYCYCLOHEXYL}-2-HYDROXYBUTANAMIDE
Formula C20 H43 N7 O8
Formal charge 0
Molecular weight 509.598 g/mol
Component type NON-POLYMER

Chemical features

Atom count 78
Chiral atom count 11
Chiral atoms C11 C12 C21 C24 C31 C32 C41 C51 C42 C52 C62
Bond count 79
Aromatic bond count 0

Chemical Identifiers

Systematic name (ACDLabs) (2R)-4-amino-N-{(1R,2S,3R,4R,5S)-5-amino-2-{2-[(2-aminoethyl)amino]ethoxy}-4-[(2,6-diamino-2,6-dideoxy-alpha-D-glucopyranosyl)oxy]-3-hydroxycyclohexyl}-2-hydroxybutanamide
Systematic name (OpenEye OEToolkits) (2R)-4-amino-N-[(1R,2S,3R,4R,5S)-5-amino-4-[(2R,3R,4R,5S,6R)-3-amino-6-(aminomethyl)-4,5-dihydroxy-oxan-2-yl]oxy-2-[2-(2-aminoethylamino)ethoxy]-3-hydroxy-cyclohexyl]-2-hydroxy-butanamide

Chemical Descriptors

Stereo SMILES (CACTVS) NCCNCCO[C@@H]1[C@@H](O)[C@H](O[C@H]2O[C@H](CN)[C@@H](O)[C@H](O)[C@H]2N)[C@@H](N)C[C@H]1NC(=O)[C@H](O)CCN
SMILES (CACTVS) NCCNCCO[CH]1[CH](O)[CH](O[CH]2O[CH](CN)[CH](O)[CH](O)[CH]2N)[CH](N)C[CH]1NC(=O)[CH](O)CCN
Stereo SMILES (OpenEye) C1[C@@H]([C@H]([C@@H]([C@H]([C@@H]1NC(=O)[C@@H](CCN)O)OCCNCCN)O)O[C@@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CN)O)O)N)N
InChI descriptor InChI=1S/C20H43N7O8/c21-2-1-11(28)19(32)27-10-7-9(24)17(16(31)18(10)33-6-5-26-4-3-22)35-20-13(25)15(30)14(29)12(8-23)34-20/h9-18,20,26,28-31H,1-8,21-25H2,(H,27,32)/t9-,10+,11+,12+,13+,14+,15+,16-,17+,18-,20+/m0/s1
InChIKey descriptor OGRDTONULPXNRP-HSDDYVLRSA-N

Status Information

Last modified 2011-06-04
Created 2006-01-05
Release status REL
Model PDB code 2F4T
Processing site RCSB