PDB Chemical Component AAN
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for AAN
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C1 |
C2 |
1.541 |
1.507 |
| C1 |
O1 |
1.230 |
1.208 |
| C1 |
O2 |
1.236 |
1.342 |
| C2 |
C1' |
1.511 |
1.508 |
| C2 |
H21 |
1.115 |
1.089 |
| C2 |
H22 |
1.115 |
1.089 |
| C1' |
C2' |
1.380 |
1.385 |
| C1' |
C6' |
1.387 |
1.385 |
| C2' |
C3' |
1.385 |
1.376 |
| C2' |
H2' |
1.102 |
1.080 |
| C3' |
C4' |
1.367 |
1.406 |
| C3' |
H3' |
1.103 |
1.081 |
| C4' |
N4' |
1.088 |
1.345 |
| C4' |
C5' |
1.391 |
1.405 |
| N4' |
O3' |
1.419 |
1.217 |
| N4' |
O4' |
1.416 |
1.218 |
| C5' |
C6' |
1.393 |
1.376 |
| C5' |
H5' |
1.104 |
1.080 |
| C6' |
H6' |
1.103 |
1.080 |
| O2 |
HO2 |
0.950 |
0.967 |
Bond Angles for AAN
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C2 |
C1 |
O1 |
120.5 |
120.0 |
| C2 |
C1 |
O2 |
126.4 |
120.0 |
| C1 |
C2 |
C1' |
112.2 |
109.5 |
| C1 |
C2 |
H21 |
111.2 |
109.5 |
| C1 |
C2 |
H22 |
111.2 |
109.5 |
| O1 |
C1 |
O2 |
113.0 |
120.0 |
| C1 |
O2 |
HO2 |
126.4 |
120.0 |
| C1' |
C2 |
H21 |
111.2 |
109.5 |
| C1' |
C2 |
H22 |
111.1 |
109.5 |
| C2 |
C1' |
C2' |
119.2 |
119.7 |
| C2 |
C1' |
C6' |
119.0 |
119.8 |
| H21 |
C2 |
H22 |
99.2 |
109.5 |
| C2' |
C1' |
C6' |
121.8 |
120.5 |
| C1' |
C2' |
C3' |
115.9 |
120.3 |
| C1' |
C2' |
H2' |
121.9 |
119.9 |
| C1' |
C6' |
C5' |
123.2 |
120.3 |
| C1' |
C6' |
H6' |
118.2 |
119.8 |
| C3' |
C2' |
H2' |
122.2 |
119.8 |
| C2' |
C3' |
C4' |
121.2 |
119.8 |
| C2' |
C3' |
H3' |
120.1 |
120.2 |
| C4' |
C3' |
H3' |
118.7 |
120.1 |
| C3' |
C4' |
N4' |
119.4 |
120.2 |
| C3' |
C4' |
C5' |
124.6 |
119.5 |
| N4' |
C4' |
C5' |
115.9 |
120.3 |
| C4' |
N4' |
O3' |
109.2 |
120.0 |
| C4' |
N4' |
O4' |
120.7 |
120.0 |
| C4' |
C5' |
C6' |
113.1 |
119.8 |
| C4' |
C5' |
H5' |
123.4 |
120.1 |
| O3' |
N4' |
O4' |
130.0 |
120.0 |
| C6' |
C5' |
H5' |
123.5 |
120.2 |
| C5' |
C6' |
H6' |
118.7 |
119.9 |
Torsion Angles for AAN
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| O1 |
C1 |
C2 |
O2 |
178.7 |
180.0 |
| C2 |
C1 |
O2 |
HO2 |
180.0 |
180.0 |
| C1' |
C2 |
C1 |
H21 |
234.7 |
240.0 |
| C1' |
C2 |
C1 |
H22 |
125.2 |
120.0 |
| C1 |
C2 |
C1' |
C2' |
61.8 |
90.0 |
| C1 |
C2 |
C1' |
C6' |
241.7 |
269.7 |
| H21 |
C2 |
C1 |
H22 |
250.5 |
240.0 |
| C2 |
C1 |
O1 |
O2 |
181.1 |
180.0 |
| O1 |
C1 |
C2 |
C1' |
167.1 |
360.0 |
| O1 |
C1 |
C2 |
H21 |
292.3 |
120.0 |
| O1 |
C1 |
C2 |
H22 |
41.9 |
240.0 |
| O1 |
C1 |
O2 |
HO2 |
1.2 |
0.0 |
| C2 |
C1 |
O2 |
O1 |
178.8 |
180.0 |
| O2 |
C1 |
C2 |
C1' |
348.4 |
180.0 |
| O2 |
C1 |
C2 |
H21 |
113.6 |
300.0 |
| O2 |
C1 |
C2 |
H22 |
223.1 |
60.0 |
| C1' |
C2 |
C1 |
O1 |
167.1 |
360.0 |
| C1' |
C2 |
C1 |
O2 |
348.4 |
180.0 |
| C1 |
C2 |
C1' |
H21 |
125.3 |
120.0 |
| C1 |
C2 |
C1' |
H22 |
234.7 |
240.0 |
| H21 |
C2 |
C1' |
H22 |
109.5 |
120.0 |
| C2' |
C1' |
C2 |
C6' |
180.1 |
180.3 |
| C2 |
C1' |
C2' |
C3' |
186.2 |
180.0 |
| C2 |
C1' |
C2' |
H2' |
6.2 |
360.0 |
| C2 |
C1' |
C6' |
C5' |
178.0 |
179.7 |
| C2 |
C1' |
C6' |
H6' |
358.0 |
0.3 |
| H21 |
C2 |
C1 |
O1 |
292.3 |
120.0 |
| H21 |
C2 |
C1 |
O2 |
113.6 |
300.0 |
| C1 |
C2 |
H21 |
C1' |
234.2 |
240.0 |
| C1 |
C2 |
H21 |
H22 |
117.1 |
120.0 |
| C1' |
C2 |
H21 |
H22 |
243.0 |
240.0 |
| H21 |
C2 |
C1' |
C2' |
296.6 |
330.0 |
| H21 |
C2 |
C1' |
C6' |
116.5 |
149.7 |
| H22 |
C2 |
C1 |
O1 |
41.9 |
240.0 |
| H22 |
C2 |
C1 |
O2 |
223.1 |
60.0 |
| C1 |
C2 |
H22 |
C1' |
125.8 |
120.0 |
| C1 |
C2 |
H22 |
H21 |
242.9 |
240.0 |
| C1' |
C2 |
H22 |
H21 |
117.1 |
120.0 |
| H22 |
C2 |
C1' |
C2' |
187.1 |
210.0 |
| H22 |
C2 |
C1' |
C6' |
7.0 |
29.7 |
| C2' |
C1' |
C2 |
H21 |
296.6 |
330.0 |
| C2' |
C1' |
C2 |
H22 |
187.1 |
210.0 |
| C2 |
C1' |
C2' |
C6' |
179.9 |
179.7 |
| C2' |
C1' |
C6' |
C5' |
357.9 |
359.5 |
| C2' |
C1' |
C6' |
H6' |
177.9 |
180.0 |
| C3' |
C2' |
C1' |
H2' |
180.0 |
180.0 |
| C1' |
C2' |
C3' |
C4' |
353.3 |
360.0 |
| C1' |
C2' |
C3' |
H3' |
173.4 |
180.0 |
| C6' |
C1' |
C2 |
H21 |
116.5 |
149.7 |
| C6' |
C1' |
C2 |
H22 |
7.0 |
29.7 |
| C2 |
C1' |
C6' |
C2' |
180.1 |
180.3 |
| C6' |
C1' |
C2' |
C3' |
6.4 |
0.3 |
| C6' |
C1' |
C2' |
H2' |
186.4 |
180.2 |
| C4' |
C5' |
C6' |
C1' |
358.0 |
0.5 |
| C1' |
C6' |
C5' |
H5' |
178.0 |
180.3 |
| C5' |
C6' |
C1' |
H6' |
180.0 |
179.5 |
| C3' |
C2' |
C1' |
C6' |
6.4 |
0.3 |
| C1' |
C2' |
C3' |
H2' |
180.0 |
180.0 |
| C4' |
C3' |
C2' |
H3' |
180.0 |
180.0 |
| C2' |
C3' |
C4' |
N4' |
186.8 |
180.1 |
| C2' |
C3' |
C4' |
C5' |
2.8 |
360.0 |
| H2' |
C2' |
C1' |
C6' |
186.4 |
180.2 |
| C1' |
C2' |
H2' |
C3' |
180.0 |
180.0 |
| H2' |
C2' |
C3' |
C4' |
173.3 |
180.0 |
| H2' |
C2' |
C3' |
H3' |
353.4 |
0.1 |
| C4' |
C3' |
C2' |
H2' |
173.3 |
180.0 |
| C2' |
C3' |
C4' |
H3' |
180.0 |
180.0 |
| N4' |
C4' |
C3' |
C5' |
184.0 |
180.1 |
| C3' |
C4' |
N4' |
O3' |
358.2 |
180.0 |
| C3' |
C4' |
N4' |
O4' |
179.8 |
359.9 |
| C3' |
C4' |
C5' |
C6' |
1.7 |
359.8 |
| C3' |
C4' |
C5' |
H5' |
181.7 |
180.0 |
| H3' |
C3' |
C2' |
H2' |
353.4 |
0.1 |
| C2' |
C3' |
H3' |
C4' |
180.0 |
180.0 |
| H3' |
C3' |
C4' |
N4' |
6.7 |
0.0 |
| H3' |
C3' |
C4' |
C5' |
182.7 |
180.0 |
| N4' |
C4' |
C3' |
H3' |
6.7 |
0.0 |
| C3' |
C4' |
N4' |
C5' |
176.3 |
179.9 |
| N4' |
C4' |
C5' |
C6' |
177.8 |
179.7 |
| N4' |
C4' |
C5' |
H5' |
357.8 |
359.9 |
| O3' |
N4' |
C4' |
O4' |
178.4 |
180.1 |
| C1' |
C6' |
C5' |
C4' |
358.0 |
0.5 |
| C5' |
C4' |
C3' |
H3' |
182.7 |
180.0 |
| C3' |
C4' |
C5' |
N4' |
183.9 |
180.1 |
| C5' |
C4' |
N4' |
O3' |
181.9 |
0.1 |
| C5' |
C4' |
N4' |
O4' |
3.5 |
180.0 |
| C6' |
C5' |
C4' |
H5' |
180.0 |
179.8 |
| C4' |
C5' |
C6' |
H6' |
178.0 |
180.0 |
| O3' |
N4' |
C4' |
C5' |
181.9 |
0.1 |
| C4' |
N4' |
O3' |
O4' |
181.8 |
179.9 |
| O4' |
N4' |
C4' |
C5' |
3.5 |
180.0 |
| C4' |
N4' |
O4' |
O3' |
178.0 |
180.1 |
| C1' |
C6' |
C5' |
H6' |
180.0 |
180.5 |
| C4' |
C5' |
C6' |
H5' |
180.0 |
180.2 |
| C4' |
C5' |
H5' |
C6' |
180.0 |
179.8 |
| H5' |
C5' |
C6' |
H6' |
358.0 |
359.8 |
| C1' |
C6' |
H6' |
C5' |
180.0 |
179.5 |
| H6' |
C6' |
C5' |
H5' |
358.0 |
359.8 |