PDB Chemical Component AAI
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for AAI
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
O12 |
C10 |
1.229 |
1.216 |
C10 |
N11 |
1.339 |
1.349 |
C10 |
C6 |
1.494 |
1.476 |
C7 |
C6 |
1.432 |
1.394 |
C7 |
C8 |
1.421 |
1.384 |
C6 |
C3 |
1.417 |
1.402 |
C8 |
C9 |
1.422 |
1.379 |
C3 |
N2 |
1.390 |
1.375 |
C3 |
C4 |
1.447 |
1.405 |
N2 |
C1 |
1.338 |
1.362 |
C9 |
C4 |
1.394 |
1.397 |
C4 |
N5 |
1.384 |
1.358 |
C1 |
N5 |
1.347 |
1.301 |
C1 |
C13 |
1.524 |
1.507 |
C13 |
C18 |
1.553 |
1.532 |
C13 |
C14 |
1.543 |
1.531 |
C18 |
C17 |
1.549 |
1.530 |
C14 |
C15 |
1.547 |
1.531 |
C17 |
N16 |
1.496 |
1.468 |
C15 |
N16 |
1.495 |
1.468 |
N16 |
C19 |
1.495 |
1.469 |
C20 |
C19 |
1.550 |
1.530 |
C20 |
C21 |
1.532 |
1.530 |
N2 |
H2 |
0.999 |
0.970 |
C7 |
H7 |
1.080 |
1.079 |
C8 |
H8 |
1.080 |
1.079 |
C9 |
H9 |
1.080 |
1.080 |
N11 |
H111 |
1.000 |
0.970 |
N11 |
H112 |
1.000 |
0.970 |
C13 |
H13 |
1.100 |
1.089 |
C14 |
H141 |
1.100 |
1.090 |
C14 |
H142 |
1.100 |
1.090 |
C15 |
H151 |
1.100 |
1.089 |
C15 |
H152 |
1.100 |
1.091 |
C17 |
H171 |
1.100 |
1.090 |
C17 |
H172 |
1.100 |
1.091 |
C18 |
H181 |
1.100 |
1.090 |
C18 |
H182 |
1.100 |
1.090 |
C19 |
H191 |
1.100 |
1.090 |
C19 |
H192 |
1.100 |
1.090 |
C20 |
H201 |
1.100 |
1.090 |
C20 |
H202 |
1.100 |
1.090 |
C21 |
H211 |
1.100 |
1.090 |
C21 |
H212 |
1.100 |
1.090 |
C21 |
H213 |
1.100 |
1.090 |
Bond Angles for AAI
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C10 |
N11 |
H111 |
111.9 |
120.0 |
C10 |
N11 |
H112 |
124.0 |
119.9 |
C7 |
C8 |
C9 |
119.9 |
120.7 |
C8 |
C7 |
H7 |
119.6 |
119.9 |
C7 |
C8 |
H8 |
120.0 |
119.6 |
C9 |
C8 |
H8 |
120.1 |
119.7 |
C8 |
C9 |
H9 |
119.9 |
119.9 |
C3 |
N2 |
H2 |
126.4 |
126.3 |
C3 |
C4 |
N5 |
107.1 |
106.9 |
N2 |
C1 |
N5 |
113.1 |
110.0 |
N2 |
C1 |
C13 |
123.0 |
125.0 |
C1 |
N5 |
C4 |
106.6 |
109.6 |
N5 |
C1 |
C13 |
123.9 |
125.0 |
C1 |
C13 |
C18 |
110.3 |
109.5 |
C1 |
C13 |
C14 |
110.3 |
109.5 |
C1 |
C13 |
H13 |
108.6 |
109.5 |
C14 |
C13 |
C18 |
110.1 |
109.2 |
C13 |
C18 |
C17 |
111.7 |
109.2 |
C18 |
C13 |
H13 |
108.7 |
109.5 |
C13 |
C18 |
H181 |
108.7 |
109.5 |
C13 |
C18 |
H182 |
108.2 |
109.5 |
C13 |
C14 |
C15 |
110.8 |
109.3 |
C14 |
C13 |
H13 |
108.8 |
109.6 |
C13 |
C14 |
H141 |
109.0 |
109.5 |
C13 |
C14 |
H142 |
108.7 |
109.5 |
C18 |
C17 |
H171 |
108.2 |
109.5 |
C18 |
C17 |
H172 |
107.3 |
109.4 |
C14 |
C15 |
N16 |
112.4 |
109.5 |
C15 |
C14 |
H141 |
109.0 |
109.6 |
C15 |
C14 |
H142 |
108.7 |
109.5 |
C14 |
C15 |
H151 |
108.5 |
109.5 |
C14 |
C15 |
H152 |
107.9 |
109.4 |
C17 |
N16 |
C19 |
111.6 |
111.0 |
C15 |
N16 |
C19 |
111.1 |
111.0 |
N16 |
C15 |
H151 |
108.5 |
109.5 |
N16 |
C15 |
H152 |
107.9 |
109.5 |
N16 |
C19 |
H191 |
107.3 |
109.5 |
N16 |
C19 |
H192 |
105.7 |
109.4 |
C20 |
C19 |
H191 |
107.3 |
109.5 |
C20 |
C19 |
H192 |
105.7 |
109.5 |
C21 |
C20 |
H201 |
108.5 |
109.5 |
C21 |
C20 |
H202 |
107.8 |
109.5 |
C20 |
C21 |
H211 |
109.5 |
109.5 |
C20 |
C21 |
H212 |
109.5 |
109.5 |
C20 |
C21 |
H213 |
109.5 |
109.5 |
H111 |
N11 |
H112 |
124.0 |
120.1 |
H141 |
C14 |
H142 |
110.5 |
109.6 |
H151 |
C15 |
H152 |
111.7 |
109.4 |
H171 |
C17 |
H172 |
112.6 |
109.4 |
H181 |
C18 |
H182 |
111.3 |
109.5 |
H191 |
C19 |
H192 |
114.9 |
109.5 |
H201 |
C20 |
H202 |
111.9 |
109.5 |
H211 |
C21 |
H212 |
109.4 |
109.5 |
H211 |
C21 |
H213 |
109.4 |
109.5 |
H212 |
C21 |
H213 |
109.5 |
109.5 |
Torsion Angles for AAI
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
O12 |
C10 |
N11 |
H111 |
180.0 |
180.0 |
O12 |
C10 |
N11 |
H112 |
360.0 |
360.0 |
H111 |
N11 |
C10 |
H112 |
180.0 |
180.0 |
C9 |
C8 |
C7 |
H8 |
180.0 |
180.0 |
C7 |
C8 |
C9 |
H9 |
180.0 |
180.0 |
C6 |
C3 |
N2 |
H2 |
359.9 |
360.0 |
C9 |
C8 |
C7 |
H7 |
180.0 |
180.0 |
C7 |
C8 |
C9 |
H8 |
180.0 |
180.0 |
C3 |
N2 |
C1 |
N5 |
359.9 |
359.9 |
C3 |
N2 |
C1 |
C13 |
179.9 |
179.7 |
C4 |
C3 |
N2 |
H2 |
180.1 |
180.0 |
C1 |
N5 |
C4 |
C3 |
0.0 |
360.0 |
N2 |
C1 |
N5 |
C4 |
0.1 |
0.1 |
N5 |
C1 |
N2 |
C13 |
180.0 |
180.2 |
N2 |
C1 |
C13 |
C18 |
193.1 |
85.2 |
N2 |
C1 |
C13 |
C14 |
71.3 |
325.6 |
N2 |
C1 |
C13 |
H13 |
312.2 |
205.4 |
C4 |
N5 |
C1 |
C13 |
180.1 |
180.3 |
C3 |
C4 |
N5 |
C1 |
0.0 |
360.0 |
N2 |
C1 |
N5 |
C13 |
180.0 |
179.8 |
N5 |
C1 |
C13 |
C18 |
13.1 |
265.0 |
N5 |
C1 |
C13 |
C14 |
251.2 |
145.3 |
N5 |
C1 |
C13 |
H13 |
132.1 |
25.1 |
N2 |
C1 |
C13 |
N5 |
180.0 |
180.3 |
C13 |
C1 |
N5 |
C4 |
180.1 |
180.3 |
C14 |
C13 |
C1 |
C18 |
238.2 |
240.3 |
C1 |
C13 |
C18 |
C17 |
186.1 |
182.5 |
C18 |
C13 |
C1 |
H13 |
240.9 |
239.9 |
C1 |
C13 |
C18 |
H181 |
306.1 |
302.4 |
C1 |
C13 |
C18 |
H182 |
67.0 |
62.5 |
C1 |
C13 |
C14 |
C15 |
176.3 |
177.5 |
C14 |
C13 |
C1 |
H13 |
119.1 |
120.2 |
C1 |
C13 |
C14 |
H141 |
296.3 |
297.5 |
C1 |
C13 |
C14 |
H142 |
56.8 |
57.6 |
C1 |
C13 |
C18 |
C14 |
238.1 |
240.1 |
C1 |
C13 |
C18 |
H13 |
119.0 |
120.1 |
C18 |
C13 |
C14 |
C15 |
54.3 |
57.7 |
C14 |
C13 |
C18 |
H13 |
240.9 |
240.0 |
C18 |
C13 |
C14 |
H141 |
174.3 |
177.6 |
C18 |
C13 |
C14 |
H142 |
294.9 |
297.8 |
C13 |
C18 |
C17 |
H171 |
172.3 |
299.1 |
C13 |
C18 |
C17 |
H172 |
294.0 |
179.2 |
H181 |
C18 |
C13 |
H182 |
239.1 |
239.9 |
C1 |
C13 |
C14 |
C18 |
122.0 |
119.9 |
C1 |
C13 |
C14 |
H13 |
241.0 |
239.8 |
C14 |
C13 |
C18 |
C17 |
308.0 |
302.3 |
C18 |
C13 |
C14 |
H13 |
119.1 |
120.0 |
C14 |
C13 |
C18 |
H181 |
68.0 |
62.3 |
C14 |
C13 |
C18 |
H182 |
188.9 |
182.4 |
C13 |
C14 |
C15 |
N16 |
302.7 |
300.8 |
C15 |
C14 |
C13 |
H141 |
240.0 |
240.0 |
C15 |
C14 |
C13 |
H142 |
119.4 |
119.9 |
C13 |
C14 |
C15 |
H151 |
62.7 |
60.9 |
C13 |
C14 |
C15 |
H152 |
184.0 |
180.8 |
H141 |
C14 |
C13 |
H142 |
239.4 |
239.9 |
C17 |
C18 |
C13 |
H13 |
67.1 |
62.4 |
C13 |
C18 |
C17 |
H181 |
120.0 |
119.9 |
C13 |
C18 |
C17 |
H182 |
241.0 |
240.1 |
C18 |
C17 |
N16 |
C19 |
181.5 |
174.1 |
H171 |
C17 |
C18 |
H172 |
238.3 |
119.9 |
C15 |
C14 |
C13 |
C18 |
54.3 |
57.7 |
C15 |
C14 |
C13 |
H13 |
295.3 |
297.7 |
C13 |
C14 |
C15 |
H141 |
120.0 |
119.9 |
C13 |
C14 |
C15 |
H142 |
240.5 |
240.1 |
C14 |
C15 |
N16 |
C19 |
181.1 |
185.8 |
N16 |
C15 |
C14 |
H151 |
240.0 |
239.9 |
N16 |
C15 |
C14 |
H152 |
118.8 |
120.0 |
H141 |
C14 |
C15 |
H142 |
120.5 |
120.2 |
H151 |
C15 |
C14 |
H152 |
238.8 |
240.1 |
C13 |
C18 |
C17 |
N16 |
52.3 |
59.2 |
C15 |
N16 |
C17 |
C19 |
124.8 |
124.1 |
C17 |
N16 |
C15 |
H151 |
296.1 |
301.7 |
C17 |
N16 |
C15 |
H152 |
174.9 |
181.8 |
C17 |
N16 |
C19 |
H191 |
182.7 |
54.2 |
C17 |
N16 |
C19 |
H192 |
305.8 |
174.2 |
N16 |
C15 |
C14 |
H141 |
182.7 |
180.9 |
N16 |
C15 |
C14 |
H142 |
62.2 |
60.7 |
C14 |
C15 |
N16 |
H151 |
120.0 |
120.0 |
C14 |
C15 |
N16 |
H152 |
241.2 |
240.0 |
C17 |
N16 |
C15 |
C19 |
235.0 |
235.9 |
C15 |
N16 |
C19 |
H191 |
57.9 |
290.1 |
C15 |
N16 |
C19 |
H192 |
181.0 |
50.0 |
H151 |
C15 |
N16 |
H152 |
121.2 |
120.0 |
C19 |
N16 |
C15 |
H151 |
61.1 |
65.8 |
C19 |
N16 |
C15 |
H152 |
299.9 |
305.8 |
C20 |
C19 |
N16 |
H191 |
240.0 |
239.9 |
C20 |
C19 |
N16 |
H192 |
116.9 |
120.0 |
H191 |
C19 |
N16 |
H192 |
236.9 |
240.0 |
N16 |
C19 |
C20 |
H191 |
120.0 |
120.0 |
N16 |
C19 |
C20 |
H192 |
243.1 |
240.0 |
H191 |
C19 |
C20 |
H192 |
123.1 |
120.0 |
C21 |
C20 |
C19 |
H191 |
59.1 |
60.0 |
C21 |
C20 |
C19 |
H192 |
295.9 |
300.0 |
H201 |
C20 |
C21 |
H202 |
121.3 |
120.0 |
H211 |
C21 |
C20 |
H212 |
240.0 |
240.0 |
H211 |
C21 |
C20 |
H213 |
120.0 |
120.0 |
H212 |
C21 |
C20 |
H213 |
240.0 |
240.0 |
H2 |
N2 |
C1 |
N5 |
179.9 |
180.0 |
H2 |
N2 |
C1 |
C13 |
359.9 |
359.8 |
H7 |
C7 |
C8 |
C9 |
180.0 |
180.0 |
H7 |
C7 |
C8 |
H8 |
360.0 |
360.0 |
C7 |
C8 |
H8 |
C9 |
180.0 |
180.0 |
H8 |
C8 |
C7 |
H7 |
360.0 |
360.0 |
H8 |
C8 |
C9 |
H9 |
0.0 |
360.0 |
H9 |
C9 |
C8 |
H8 |
0.0 |
360.0 |
C10 |
N11 |
H111 |
H112 |
180.0 |
180.0 |
C10 |
N11 |
H112 |
H111 |
180.0 |
180.0 |
C1 |
C13 |
H13 |
C18 |
239.9 |
239.9 |
C1 |
C13 |
H13 |
C14 |
120.0 |
120.2 |
C14 |
C13 |
H13 |
C18 |
119.9 |
119.8 |
H13 |
C13 |
C18 |
C17 |
67.1 |
62.4 |
H13 |
C13 |
C18 |
H181 |
187.1 |
182.3 |
H13 |
C13 |
C18 |
H182 |
308.0 |
302.4 |
H13 |
C13 |
C14 |
C15 |
295.3 |
297.7 |
H13 |
C13 |
C14 |
H141 |
55.3 |
57.7 |
H13 |
C13 |
C14 |
H142 |
175.8 |
177.8 |
H141 |
C14 |
C13 |
C18 |
174.3 |
177.6 |
C13 |
C14 |
H141 |
C15 |
238.9 |
240.2 |
H141 |
C14 |
C13 |
H13 |
55.3 |
57.7 |
C13 |
C14 |
H141 |
H142 |
119.5 |
120.1 |
H141 |
C14 |
C15 |
N16 |
182.7 |
180.9 |
C15 |
C14 |
H141 |
H142 |
240.6 |
239.9 |
H141 |
C14 |
C15 |
H151 |
302.7 |
300.9 |
H141 |
C14 |
C15 |
H152 |
63.9 |
60.9 |
H142 |
C14 |
C13 |
C18 |
294.9 |
297.8 |
C13 |
C14 |
H142 |
C15 |
120.8 |
119.8 |
H142 |
C14 |
C13 |
H13 |
175.8 |
177.8 |
C13 |
C14 |
H142 |
H141 |
240.4 |
239.9 |
H142 |
C14 |
C15 |
N16 |
62.2 |
60.7 |
C15 |
C14 |
H142 |
H141 |
119.6 |
120.2 |
H142 |
C14 |
C15 |
H151 |
182.2 |
180.8 |
H142 |
C14 |
C15 |
H152 |
303.4 |
300.7 |
C14 |
C15 |
H151 |
N16 |
237.6 |
239.9 |
H151 |
C15 |
C14 |
H141 |
302.7 |
300.9 |
H151 |
C15 |
C14 |
H142 |
182.2 |
180.8 |
C14 |
C15 |
H151 |
H152 |
118.8 |
119.9 |
H151 |
C15 |
N16 |
C19 |
61.1 |
65.8 |
N16 |
C15 |
H151 |
H152 |
241.2 |
240.0 |
C14 |
C15 |
H152 |
N16 |
121.6 |
120.0 |
H152 |
C15 |
C14 |
H141 |
63.9 |
60.9 |
H152 |
C15 |
C14 |
H142 |
303.4 |
300.7 |
C14 |
C15 |
H152 |
H151 |
240.8 |
240.1 |
H152 |
C15 |
N16 |
C19 |
299.9 |
305.8 |
N16 |
C15 |
H152 |
H151 |
119.2 |
120.0 |
C18 |
C17 |
H171 |
H172 |
118.4 |
240.1 |
H171 |
C17 |
N16 |
C19 |
61.5 |
294.2 |
C18 |
C17 |
H172 |
H171 |
241.1 |
120.0 |
H172 |
C17 |
N16 |
C19 |
299.8 |
54.1 |
C13 |
C18 |
H181 |
C17 |
238.1 |
240.2 |
H181 |
C18 |
C13 |
H13 |
187.1 |
182.3 |
C13 |
C18 |
H181 |
H182 |
119.0 |
120.1 |
H181 |
C18 |
C17 |
H171 |
52.3 |
179.2 |
H181 |
C18 |
C17 |
H172 |
174.1 |
59.3 |
C13 |
C18 |
H182 |
C17 |
121.3 |
119.8 |
H182 |
C18 |
C13 |
H13 |
308.0 |
302.4 |
C13 |
C18 |
H182 |
H181 |
240.6 |
239.9 |
H182 |
C18 |
C17 |
H171 |
291.3 |
59.1 |
H182 |
C18 |
C17 |
H172 |
53.1 |
299.2 |
N16 |
C19 |
H191 |
H192 |
117.2 |
119.9 |
C20 |
C19 |
H191 |
H192 |
242.8 |
240.0 |
N16 |
C19 |
H192 |
H191 |
241.9 |
240.0 |
C20 |
C19 |
H192 |
H191 |
118.1 |
120.0 |
H201 |
C20 |
C19 |
H191 |
179.1 |
180.0 |
H201 |
C20 |
C19 |
H192 |
56.0 |
60.0 |
C21 |
C20 |
H201 |
H202 |
241.2 |
240.0 |
H201 |
C20 |
C21 |
H211 |
69.0 |
179.9 |
H201 |
C20 |
C21 |
H212 |
189.0 |
300.0 |
H201 |
C20 |
C21 |
H213 |
309.0 |
60.0 |
H202 |
C20 |
C19 |
H191 |
300.4 |
300.0 |
H202 |
C20 |
C19 |
H192 |
177.3 |
180.0 |
C21 |
C20 |
H202 |
H201 |
119.2 |
120.0 |
H202 |
C20 |
C21 |
H211 |
307.7 |
60.0 |
H202 |
C20 |
C21 |
H212 |
67.7 |
180.0 |
H202 |
C20 |
C21 |
H213 |
187.7 |
300.0 |
H211 |
C21 |
C20 |
H201 |
69.0 |
179.9 |
H211 |
C21 |
C20 |
H202 |
307.7 |
60.0 |
C20 |
C21 |
H211 |
H212 |
120.0 |
120.0 |
C20 |
C21 |
H211 |
H213 |
240.0 |
240.0 |
H212 |
C21 |
H211 |
H213 |
120.0 |
120.0 |
H212 |
C21 |
C20 |
H201 |
189.0 |
300.0 |
H212 |
C21 |
C20 |
H202 |
67.7 |
180.0 |
C20 |
C21 |
H212 |
H211 |
240.0 |
240.0 |
C20 |
C21 |
H212 |
H213 |
120.0 |
120.0 |
H211 |
C21 |
H212 |
H213 |
240.0 |
240.0 |
H213 |
C21 |
C20 |
H201 |
309.0 |
60.0 |
H213 |
C21 |
C20 |
H202 |
187.7 |
300.0 |
C20 |
C21 |
H213 |
H211 |
120.0 |
120.0 |
C20 |
C21 |
H213 |
H212 |
240.0 |
240.0 |
H211 |
C21 |
H213 |
H212 |
119.9 |
120.0 |