PDB Chemical Component A8T
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for A8T
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C26 |
C25 |
1.504 |
1.383 |
| C26 |
C27 |
1.379 |
1.382 |
| C25 |
C24 |
1.387 |
1.382 |
| C27 |
C22 |
1.516 |
1.383 |
| C24 |
C23 |
1.515 |
1.383 |
| C22 |
C23 |
1.385 |
1.382 |
| C22 |
C21 |
1.532 |
1.507 |
| C21 |
C16 |
1.570 |
1.507 |
| C20 |
C19 |
1.418 |
1.363 |
| C20 |
C15 |
1.428 |
1.401 |
| C16 |
C15 |
1.451 |
1.407 |
| C16 |
N4 |
1.348 |
1.313 |
| C19 |
C18 |
1.393 |
1.393 |
| C15 |
C14 |
1.443 |
1.420 |
| N4 |
N5 |
1.337 |
1.281 |
| C18 |
C17 |
1.424 |
1.364 |
| N5 |
C10 |
1.348 |
1.321 |
| C14 |
C17 |
1.412 |
1.398 |
| C14 |
C10 |
1.480 |
1.414 |
| C10 |
N3 |
1.476 |
1.385 |
| N3 |
C8 |
1.490 |
1.469 |
| N3 |
C7 |
1.466 |
1.470 |
| C8 |
C9 |
1.497 |
1.531 |
| C7 |
C6 |
1.522 |
1.530 |
| C9 |
N2 |
1.450 |
1.470 |
| C6 |
N2 |
1.465 |
1.469 |
| N2 |
C4 |
1.480 |
1.389 |
| C4 |
C5 |
1.430 |
1.391 |
| C4 |
N1 |
1.356 |
1.324 |
| C5 |
C1 |
1.409 |
1.384 |
| N1 |
C3 |
1.360 |
1.320 |
| C1 |
C2 |
1.417 |
1.389 |
| C3 |
C2 |
1.425 |
1.381 |
| C2 |
C11 |
1.525 |
1.506 |
| C11 |
C13 |
1.533 |
1.530 |
| C11 |
O1 |
1.375 |
1.428 |
| C11 |
C12 |
1.480 |
1.531 |
| C12 |
H1 |
1.100 |
1.090 |
| C12 |
H2 |
1.100 |
1.090 |
| C12 |
H3 |
1.100 |
1.090 |
| C13 |
H4 |
1.100 |
1.090 |
| C13 |
H5 |
1.100 |
1.090 |
| C13 |
H6 |
1.100 |
1.090 |
| O1 |
H7 |
0.950 |
0.967 |
| C3 |
H8 |
1.080 |
1.081 |
| C1 |
H9 |
1.080 |
1.080 |
| C5 |
H10 |
1.080 |
1.079 |
| C9 |
H11 |
1.100 |
1.090 |
| C9 |
H12 |
1.100 |
1.090 |
| C8 |
H13 |
1.100 |
1.090 |
| C8 |
H14 |
1.100 |
1.090 |
| C6 |
H15 |
1.100 |
1.090 |
| C6 |
H16 |
1.100 |
1.090 |
| C7 |
H17 |
1.100 |
1.090 |
| C7 |
H18 |
1.100 |
1.089 |
| C17 |
H19 |
1.081 |
1.080 |
| C18 |
H20 |
1.080 |
1.080 |
| C19 |
H21 |
1.080 |
1.080 |
| C20 |
H22 |
1.080 |
1.081 |
| C21 |
H23 |
1.100 |
1.091 |
| C21 |
H24 |
1.100 |
1.090 |
| C23 |
H25 |
1.080 |
1.079 |
| C24 |
H26 |
1.080 |
1.080 |
| C25 |
H27 |
1.081 |
1.080 |
| C26 |
H28 |
1.080 |
1.080 |
| C27 |
H29 |
1.080 |
1.080 |
Bond Angles for A8T
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C26 |
C25 |
H27 |
119.6 |
120.0 |
| C27 |
C26 |
H28 |
120.0 |
120.0 |
| C26 |
C27 |
H29 |
120.4 |
120.0 |
| C25 |
C24 |
H26 |
120.2 |
120.0 |
| C24 |
C23 |
H25 |
120.4 |
120.0 |
| C22 |
C23 |
H25 |
120.3 |
120.0 |
| C22 |
C21 |
H23 |
108.5 |
109.5 |
| C22 |
C21 |
H24 |
108.5 |
109.5 |
| C20 |
C19 |
H21 |
120.5 |
119.5 |
| C15 |
C20 |
H22 |
119.3 |
120.3 |
| C19 |
C18 |
H20 |
119.5 |
119.5 |
| C18 |
C17 |
H19 |
119.7 |
120.2 |
| C14 |
C17 |
H19 |
119.7 |
120.3 |
| N3 |
C8 |
H13 |
109.0 |
109.5 |
| N3 |
C8 |
H14 |
109.0 |
109.5 |
| N3 |
C7 |
H17 |
108.8 |
109.5 |
| N3 |
C7 |
H18 |
108.8 |
109.5 |
| C8 |
C9 |
H11 |
108.9 |
109.5 |
| C8 |
C9 |
H12 |
108.9 |
109.5 |
| C7 |
C6 |
H15 |
109.3 |
109.5 |
| C7 |
C6 |
H16 |
109.3 |
109.5 |
| C4 |
C5 |
H10 |
119.4 |
120.4 |
| C5 |
C1 |
H9 |
119.9 |
120.7 |
| N1 |
C3 |
H8 |
117.0 |
119.6 |
| C13 |
C11 |
O1 |
109.1 |
109.5 |
| C11 |
C13 |
H4 |
109.5 |
109.5 |
| C11 |
C13 |
H5 |
109.4 |
109.5 |
| C11 |
C13 |
H6 |
109.5 |
109.5 |
| C11 |
O1 |
H7 |
109.5 |
114.0 |
| C11 |
C12 |
H1 |
109.5 |
109.5 |
| C11 |
C12 |
H2 |
109.5 |
109.4 |
| C11 |
C12 |
H3 |
109.5 |
109.5 |
| H1 |
C12 |
H2 |
109.5 |
109.5 |
| H1 |
C12 |
H3 |
109.4 |
109.5 |
| H2 |
C12 |
H3 |
109.4 |
109.5 |
| H4 |
C13 |
H5 |
109.5 |
109.5 |
| H4 |
C13 |
H6 |
109.4 |
109.4 |
| H5 |
C13 |
H6 |
109.5 |
109.5 |
| H11 |
C9 |
H12 |
109.5 |
109.5 |
| H13 |
C8 |
H14 |
109.5 |
109.5 |
| H15 |
C6 |
H16 |
109.5 |
109.5 |
| H17 |
C7 |
H18 |
109.4 |
109.5 |
| H23 |
C21 |
H24 |
109.5 |
109.4 |
Torsion Angles for A8T
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| C26 |
C25 |
C24 |
H26 |
181.2 |
180.0 |
| C27 |
C26 |
C25 |
H27 |
179.3 |
179.7 |
| C25 |
C24 |
C23 |
H25 |
177.7 |
180.0 |
| C27 |
C22 |
C23 |
H25 |
182.7 |
180.2 |
| C27 |
C22 |
C21 |
H23 |
316.6 |
149.7 |
| C27 |
C22 |
C21 |
H24 |
75.5 |
29.7 |
| C22 |
C23 |
C24 |
H25 |
180.0 |
179.9 |
| C24 |
C23 |
C22 |
H25 |
180.0 |
180.1 |
| C23 |
C22 |
C21 |
H23 |
139.3 |
330.0 |
| C23 |
C22 |
C21 |
H24 |
258.2 |
210.0 |
| H23 |
C21 |
C22 |
H24 |
241.2 |
120.0 |
| C20 |
C19 |
C18 |
H20 |
180.1 |
180.0 |
| C15 |
C20 |
C19 |
H21 |
177.6 |
179.9 |
| C16 |
C15 |
C20 |
H22 |
1.9 |
360.0 |
| C19 |
C18 |
C17 |
H19 |
182.5 |
180.0 |
| C15 |
C14 |
C17 |
H19 |
177.1 |
180.0 |
| C14 |
C17 |
C18 |
H19 |
180.0 |
180.1 |
| C18 |
C17 |
C14 |
H19 |
180.0 |
179.9 |
| C10 |
N3 |
C8 |
H13 |
308.5 |
63.2 |
| C10 |
N3 |
C8 |
H14 |
68.0 |
303.1 |
| C10 |
N3 |
C7 |
H17 |
293.3 |
56.9 |
| C10 |
N3 |
C7 |
H18 |
52.5 |
296.8 |
| N3 |
C8 |
C9 |
H11 |
70.4 |
181.6 |
| N3 |
C8 |
C9 |
H12 |
189.8 |
61.5 |
| H13 |
C8 |
N3 |
H14 |
240.5 |
120.0 |
| C7 |
N3 |
C8 |
H13 |
172.9 |
299.3 |
| C7 |
N3 |
C8 |
H14 |
292.3 |
179.3 |
| N3 |
C7 |
C6 |
H15 |
169.1 |
298.5 |
| N3 |
C7 |
C6 |
H16 |
288.9 |
178.4 |
| H17 |
C7 |
N3 |
H18 |
240.9 |
120.0 |
| H11 |
C9 |
C8 |
H12 |
240.7 |
120.1 |
| H15 |
C6 |
C7 |
H16 |
240.2 |
120.0 |
| N2 |
C4 |
C5 |
H10 |
3.4 |
359.9 |
| C4 |
C5 |
C1 |
H9 |
179.8 |
180.0 |
| C4 |
N1 |
C3 |
H8 |
183.6 |
180.0 |
| C2 |
C11 |
C13 |
H4 |
180.0 |
299.9 |
| C2 |
C11 |
C13 |
H5 |
300.0 |
60.0 |
| C2 |
C11 |
C13 |
H6 |
60.0 |
180.0 |
| C2 |
C11 |
O1 |
H7 |
180.0 |
60.0 |
| C2 |
C11 |
C12 |
H1 |
180.0 |
300.0 |
| C2 |
C11 |
C12 |
H2 |
300.0 |
60.0 |
| C2 |
C11 |
C12 |
H3 |
60.0 |
180.0 |
| C13 |
C11 |
O1 |
H7 |
298.1 |
300.0 |
| C13 |
C11 |
C12 |
H1 |
58.1 |
60.0 |
| C13 |
C11 |
C12 |
H2 |
178.1 |
180.0 |
| C13 |
C11 |
C12 |
H3 |
298.1 |
300.0 |
| H4 |
C13 |
C11 |
H5 |
240.0 |
240.0 |
| H4 |
C13 |
C11 |
H6 |
120.0 |
119.9 |
| H5 |
C13 |
C11 |
H6 |
240.0 |
240.0 |
| O1 |
C11 |
C13 |
H4 |
61.8 |
60.0 |
| O1 |
C11 |
C13 |
H5 |
181.8 |
180.0 |
| O1 |
C11 |
C13 |
H6 |
301.8 |
300.0 |
| O1 |
C11 |
C12 |
H1 |
299.4 |
180.0 |
| O1 |
C11 |
C12 |
H2 |
59.4 |
300.0 |
| O1 |
C11 |
C12 |
H3 |
179.4 |
60.0 |
| H1 |
C12 |
C11 |
H2 |
240.0 |
240.0 |
| H1 |
C12 |
C11 |
H3 |
120.0 |
120.0 |
| H2 |
C12 |
C11 |
H3 |
240.0 |
240.0 |
| C11 |
C12 |
H1 |
H2 |
120.0 |
120.0 |
| C11 |
C12 |
H1 |
H3 |
240.0 |
240.0 |
| H2 |
C12 |
H1 |
H3 |
119.9 |
120.0 |
| C11 |
C12 |
H2 |
H1 |
239.9 |
240.0 |
| C11 |
C12 |
H2 |
H3 |
120.0 |
120.0 |
| H1 |
C12 |
H2 |
H3 |
240.1 |
240.0 |
| C11 |
C12 |
H3 |
H1 |
120.0 |
120.0 |
| C11 |
C12 |
H3 |
H2 |
240.0 |
240.1 |
| H1 |
C12 |
H3 |
H2 |
120.0 |
120.0 |
| H4 |
C13 |
C11 |
O1 |
61.8 |
60.0 |
| C11 |
C13 |
H4 |
H5 |
120.0 |
120.1 |
| C11 |
C13 |
H4 |
H6 |
240.0 |
240.0 |
| H5 |
C13 |
H4 |
H6 |
120.0 |
120.0 |
| H5 |
C13 |
C11 |
O1 |
181.8 |
180.0 |
| C11 |
C13 |
H5 |
H4 |
240.0 |
240.0 |
| C11 |
C13 |
H5 |
H6 |
120.0 |
120.0 |
| H4 |
C13 |
H5 |
H6 |
240.0 |
240.1 |
| H6 |
C13 |
C11 |
O1 |
301.8 |
300.0 |
| C11 |
C13 |
H6 |
H4 |
120.0 |
120.0 |
| C11 |
C13 |
H6 |
H5 |
240.0 |
240.0 |
| H4 |
C13 |
H6 |
H5 |
120.0 |
120.0 |
| H10 |
C5 |
C1 |
H9 |
359.7 |
0.1 |
| C8 |
C9 |
H11 |
H12 |
118.9 |
239.9 |
| C8 |
C9 |
H12 |
H11 |
241.0 |
120.1 |
| N3 |
C8 |
H13 |
H14 |
119.2 |
239.9 |
| H13 |
C8 |
C9 |
H11 |
310.2 |
301.7 |
| H13 |
C8 |
C9 |
H12 |
69.5 |
181.5 |
| N3 |
C8 |
H14 |
H13 |
240.8 |
120.1 |
| H14 |
C8 |
C9 |
H11 |
190.7 |
61.7 |
| H14 |
C8 |
C9 |
H12 |
310.0 |
301.5 |
| C7 |
C6 |
H15 |
H16 |
119.7 |
240.0 |
| C7 |
C6 |
H16 |
H15 |
240.4 |
120.0 |
| N3 |
C7 |
H17 |
H18 |
118.7 |
240.0 |
| H17 |
C7 |
C6 |
H15 |
48.6 |
58.4 |
| H17 |
C7 |
C6 |
H16 |
168.4 |
298.3 |
| N3 |
C7 |
H18 |
H17 |
241.3 |
120.0 |
| H18 |
C7 |
C6 |
H15 |
289.5 |
178.5 |
| H18 |
C7 |
C6 |
H16 |
49.3 |
58.4 |
| H20 |
C18 |
C17 |
H19 |
2.5 |
360.0 |
| H21 |
C19 |
C18 |
H20 |
0.2 |
0.1 |
| H22 |
C20 |
C19 |
H21 |
357.6 |
359.9 |
| C22 |
C21 |
H23 |
H24 |
118.3 |
240.0 |
| C22 |
C21 |
H24 |
H23 |
241.7 |
120.0 |
| H26 |
C24 |
C23 |
H25 |
357.8 |
0.1 |
| H27 |
C25 |
C24 |
H26 |
1.2 |
360.0 |
| H28 |
C26 |
C25 |
H27 |
359.3 |
0.0 |
| H28 |
C26 |
C27 |
H29 |
1.1 |
359.7 |
| H29 |
C27 |
C26 |
H28 |
1.1 |
359.7 |