PDB Chemical Component A7T
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for A7T
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C23 |
O26 |
1.220 |
1.217 |
N27 |
C23 |
1.347 |
1.347 |
C23 |
C21 |
1.475 |
1.463 |
C31 |
N27 |
1.485 |
1.466 |
C32 |
N27 |
1.481 |
1.465 |
C32 |
C36 |
1.515 |
1.507 |
C32 |
H32 |
1.100 |
1.090 |
C32 |
H32A |
1.100 |
1.091 |
C37 |
C36 |
1.400 |
1.383 |
C36 |
C38 |
1.395 |
1.383 |
C38 |
C41 |
1.389 |
1.382 |
C38 |
H38 |
1.079 |
1.080 |
C42 |
C41 |
1.389 |
1.383 |
C41 |
H41 |
1.080 |
1.080 |
C39 |
C42 |
1.389 |
1.382 |
C42 |
H42 |
1.080 |
1.080 |
C37 |
C39 |
1.392 |
1.383 |
C43 |
C39 |
1.508 |
1.506 |
C43 |
H43 |
1.100 |
1.090 |
C43 |
H43A |
1.100 |
1.090 |
C43 |
H43B |
1.100 |
1.090 |
C40 |
C37 |
1.504 |
1.507 |
C40 |
H40 |
1.100 |
1.090 |
C40 |
H40A |
1.100 |
1.090 |
C40 |
H40B |
1.100 |
1.090 |
C31 |
C34 |
1.532 |
1.530 |
C31 |
C35 |
1.527 |
1.529 |
C31 |
H31 |
1.100 |
1.090 |
C34 |
C35 |
1.520 |
1.530 |
C35 |
H35 |
1.100 |
1.090 |
C35 |
H35A |
1.100 |
1.090 |
C34 |
H34 |
1.100 |
1.090 |
C34 |
H34A |
1.100 |
1.090 |
C20 |
C21 |
1.374 |
1.339 |
C21 |
C24 |
1.507 |
1.507 |
C24 |
N28 |
1.450 |
1.472 |
C24 |
C29 |
1.538 |
1.538 |
C24 |
H24 |
1.100 |
1.090 |
C25 |
N28 |
1.462 |
1.466 |
N28 |
HN28 |
1.000 |
1.008 |
N33 |
C29 |
1.458 |
1.472 |
C29 |
H29 |
1.100 |
1.091 |
C29 |
H29A |
1.100 |
1.090 |
C30 |
N33 |
1.448 |
1.468 |
N33 |
HN33 |
0.999 |
1.009 |
C25 |
C30 |
1.533 |
1.520 |
C30 |
H30 |
1.100 |
1.090 |
C30 |
H30A |
1.100 |
1.090 |
C22 |
C25 |
1.525 |
1.522 |
C25 |
H25 |
1.100 |
1.090 |
C20 |
C22 |
1.520 |
1.502 |
C22 |
H22 |
1.100 |
1.090 |
C22 |
H22A |
1.100 |
1.090 |
C19 |
C20 |
1.535 |
1.470 |
C18 |
C19 |
1.411 |
1.400 |
C17 |
C19 |
1.398 |
1.400 |
C15 |
C17 |
1.402 |
1.376 |
C17 |
H17 |
1.081 |
1.080 |
C14 |
C15 |
1.402 |
1.390 |
C15 |
H15 |
1.079 |
1.081 |
C16 |
C18 |
1.405 |
1.376 |
C18 |
H18 |
1.081 |
1.080 |
C14 |
C16 |
1.396 |
1.390 |
C16 |
H16 |
1.080 |
1.080 |
O13 |
C14 |
1.386 |
1.357 |
C12 |
O13 |
1.445 |
1.429 |
C8 |
C12 |
1.523 |
1.530 |
C12 |
H12 |
1.100 |
1.090 |
C12 |
H12A |
1.100 |
1.090 |
C8 |
O5 |
1.430 |
1.429 |
C8 |
H8 |
1.100 |
1.090 |
C8 |
H8A |
1.100 |
1.090 |
O5 |
C3 |
1.369 |
1.360 |
C2 |
C3 |
1.475 |
1.388 |
C3 |
C6 |
1.467 |
1.388 |
C6 |
C10 |
1.392 |
1.382 |
C6 |
CL9 |
1.790 |
1.736 |
C7 |
C10 |
1.394 |
1.382 |
C10 |
H10 |
1.080 |
1.081 |
C4 |
C7 |
1.385 |
1.383 |
C11 |
C7 |
1.504 |
1.507 |
C11 |
H11 |
1.100 |
1.090 |
C11 |
H11A |
1.100 |
1.090 |
C11 |
H11B |
1.100 |
1.090 |
C2 |
C4 |
1.384 |
1.382 |
C4 |
H4 |
1.080 |
1.080 |
CL1 |
C2 |
1.774 |
1.736 |
Bond Angles for A7T
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
N27 |
C23 |
C21 |
123.9 |
120.0 |
C23 |
C21 |
C24 |
119.3 |
119.0 |
C36 |
C32 |
H32 |
104.9 |
109.5 |
C36 |
C32 |
H32A |
101.5 |
109.4 |
C32 |
C36 |
C38 |
120.5 |
120.0 |
H32 |
C32 |
H32A |
121.7 |
109.5 |
C36 |
C38 |
C41 |
119.5 |
120.0 |
C36 |
C38 |
H38 |
120.2 |
120.0 |
C41 |
C38 |
H38 |
120.2 |
120.0 |
C38 |
C41 |
H41 |
119.9 |
120.0 |
C42 |
C41 |
H41 |
119.9 |
120.0 |
C39 |
C42 |
H42 |
119.8 |
120.0 |
H43 |
C43 |
H43A |
109.5 |
109.5 |
H43 |
C43 |
H43B |
109.4 |
109.5 |
H43A |
C43 |
H43B |
109.5 |
109.5 |
H40 |
C40 |
H40A |
109.5 |
109.4 |
H40 |
C40 |
H40B |
109.5 |
109.4 |
H40A |
C40 |
H40B |
109.5 |
109.5 |
C35 |
C31 |
C34 |
59.6 |
60.0 |
C34 |
C31 |
H31 |
136.0 |
117.5 |
C31 |
C34 |
C35 |
60.0 |
60.0 |
C31 |
C34 |
H34 |
130.9 |
117.5 |
C31 |
C34 |
H34A |
136.0 |
117.5 |
C35 |
C31 |
H31 |
135.7 |
117.5 |
C31 |
C35 |
H35 |
130.7 |
117.6 |
C31 |
C35 |
H35A |
135.8 |
117.5 |
C34 |
C35 |
H35 |
130.7 |
117.5 |
C34 |
C35 |
H35A |
135.8 |
117.5 |
H35 |
C35 |
H35A |
75.0 |
115.5 |
H34 |
C34 |
H34A |
74.8 |
115.6 |
C21 |
C24 |
N28 |
111.7 |
109.2 |
C21 |
C24 |
C29 |
109.1 |
107.8 |
C21 |
C24 |
H24 |
107.0 |
110.3 |
N28 |
C24 |
C29 |
105.5 |
108.0 |
N28 |
C24 |
H24 |
110.5 |
110.3 |
C24 |
N28 |
HN28 |
107.8 |
111.0 |
C29 |
C24 |
H24 |
113.1 |
111.1 |
C24 |
C29 |
H29 |
109.8 |
109.7 |
C24 |
C29 |
H29A |
110.1 |
109.8 |
C25 |
N28 |
HN28 |
107.7 |
111.0 |
N33 |
C29 |
H29 |
109.8 |
109.8 |
N33 |
C29 |
H29A |
110.0 |
109.9 |
H29 |
C29 |
H29A |
108.7 |
109.8 |
C30 |
N33 |
HN33 |
105.7 |
111.0 |
C25 |
C30 |
H30 |
109.8 |
109.2 |
C25 |
C30 |
H30A |
109.9 |
109.2 |
H30 |
C30 |
H30A |
108.9 |
109.1 |
C22 |
C25 |
H25 |
111.3 |
107.4 |
C20 |
C22 |
H22 |
107.4 |
109.3 |
C20 |
C22 |
H22A |
106.0 |
109.0 |
H22 |
C22 |
H22A |
114.5 |
109.2 |
C15 |
C17 |
H17 |
119.5 |
120.1 |
C14 |
C15 |
H15 |
119.3 |
120.0 |
C16 |
C18 |
H18 |
118.5 |
120.1 |
C14 |
C16 |
H16 |
120.4 |
120.0 |
C8 |
C12 |
H12 |
108.9 |
109.5 |
C8 |
C12 |
H12A |
108.6 |
109.5 |
H12 |
C12 |
H12A |
110.7 |
109.5 |
O5 |
C8 |
H8 |
109.7 |
109.5 |
O5 |
C8 |
H8A |
110.0 |
109.5 |
C8 |
O5 |
C3 |
118.6 |
117.0 |
H8 |
C8 |
H8A |
108.8 |
109.5 |
O5 |
C3 |
C6 |
120.5 |
120.1 |
C3 |
C6 |
C10 |
120.2 |
119.9 |
C3 |
C6 |
CL9 |
116.4 |
120.0 |
CL9 |
C6 |
C10 |
123.4 |
120.1 |
C6 |
C10 |
H10 |
119.8 |
119.9 |
C7 |
C10 |
H10 |
119.7 |
120.0 |
H11 |
C11 |
H11A |
109.5 |
109.4 |
H11 |
C11 |
H11B |
109.5 |
109.5 |
H11A |
C11 |
H11B |
109.5 |
109.5 |
C2 |
C4 |
H4 |
119.6 |
120.0 |
Torsion Angles for A7T
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
N27 |
C23 |
C21 |
C24 |
114.9 |
0.0 |
C23 |
C21 |
C24 |
N28 |
196.4 |
203.0 |
C23 |
C21 |
C24 |
C29 |
80.2 |
85.8 |
C23 |
C21 |
C24 |
H24 |
317.5 |
324.3 |
C31 |
N27 |
C23 |
C21 |
1.9 |
6.6 |
C32 |
N27 |
C23 |
C21 |
174.1 |
186.6 |
H32 |
C32 |
C36 |
H32A |
127.5 |
120.0 |
C32 |
C36 |
C38 |
C41 |
179.1 |
180.0 |
C32 |
C36 |
C38 |
H38 |
359.1 |
359.9 |
C36 |
C32 |
H32 |
H32A |
246.0 |
240.1 |
H32 |
C32 |
C36 |
C38 |
240.3 |
234.2 |
C36 |
C32 |
H32A |
H32 |
115.8 |
120.0 |
H32A |
C32 |
C36 |
C38 |
112.8 |
114.2 |
C37 |
C36 |
C32 |
H32 |
58.3 |
53.8 |
C37 |
C36 |
C32 |
H32A |
290.8 |
293.8 |
C37 |
C36 |
C38 |
H38 |
181.2 |
180.2 |
C38 |
C36 |
C32 |
H32 |
240.3 |
234.2 |
C38 |
C36 |
C32 |
H32A |
112.8 |
114.2 |
C41 |
C38 |
C36 |
H38 |
180.0 |
180.1 |
C36 |
C38 |
C41 |
H41 |
178.9 |
180.0 |
C36 |
C38 |
C41 |
H38 |
180.0 |
179.9 |
C42 |
C41 |
C38 |
H41 |
180.0 |
180.0 |
C36 |
C38 |
H38 |
C41 |
180.0 |
180.1 |
H38 |
C38 |
C41 |
H41 |
358.9 |
0.1 |
C42 |
C41 |
C38 |
H38 |
178.9 |
180.0 |
C38 |
C41 |
C42 |
H41 |
180.0 |
180.0 |
H41 |
C41 |
C38 |
H38 |
358.9 |
0.1 |
C39 |
C42 |
C41 |
H41 |
180.7 |
180.0 |
H42 |
C42 |
C41 |
H41 |
0.6 |
360.0 |
C37 |
C39 |
C42 |
H42 |
179.8 |
179.7 |
C43 |
C39 |
C42 |
H42 |
0.4 |
0.0 |
H43A |
C43 |
H43 |
H43B |
120.0 |
120.0 |
H43 |
C43 |
H43A |
H43B |
240.0 |
240.0 |
H43 |
C43 |
H43B |
H43A |
120.0 |
120.0 |
H40A |
C40 |
H40 |
H40B |
120.0 |
119.9 |
H40 |
C40 |
H40A |
H40B |
240.0 |
240.1 |
H40 |
C40 |
H40B |
H40A |
120.0 |
119.9 |
C35 |
C31 |
C34 |
H31 |
125.9 |
107.5 |
C34 |
C31 |
C35 |
H35 |
120.0 |
107.5 |
C34 |
C31 |
C35 |
H35A |
233.3 |
252.5 |
C31 |
C34 |
C35 |
H35 |
240.0 |
252.4 |
C31 |
C34 |
C35 |
H35A |
126.7 |
107.5 |
H34 |
C34 |
C31 |
H34A |
246.7 |
215.0 |
C34 |
C31 |
C35 |
H31 |
233.7 |
252.5 |
C35 |
C31 |
C34 |
C35 |
360.0 |
360.0 |
C35 |
C31 |
C34 |
H34 |
120.0 |
107.5 |
C35 |
C31 |
C34 |
H34A |
233.3 |
252.5 |
C34 |
C35 |
C31 |
H35 |
240.0 |
252.5 |
C34 |
C35 |
C31 |
H35A |
126.7 |
107.5 |
H35 |
C35 |
C31 |
H35A |
246.7 |
215.0 |
C35 |
C31 |
H31 |
C34 |
269.0 |
291.3 |
H31 |
C31 |
C34 |
C35 |
234.1 |
252.5 |
H31 |
C31 |
C34 |
H34 |
354.1 |
359.9 |
H31 |
C31 |
C34 |
H34A |
107.4 |
145.0 |
H31 |
C31 |
C35 |
H35 |
246.3 |
215.0 |
H31 |
C31 |
C35 |
H35A |
359.6 |
360.0 |
C35 |
C34 |
C31 |
H31 |
234.1 |
252.5 |
C31 |
C34 |
C35 |
H34 |
120.0 |
107.5 |
C31 |
C34 |
C35 |
H34A |
233.3 |
252.5 |
C34 |
C35 |
C31 |
H31 |
126.3 |
107.5 |
C31 |
C35 |
C34 |
H35 |
120.0 |
107.6 |
C31 |
C35 |
C34 |
H35A |
233.3 |
252.5 |
H35 |
C35 |
C34 |
H35A |
113.3 |
144.9 |
H35 |
C35 |
C31 |
C34 |
120.0 |
107.5 |
H35 |
C35 |
C31 |
H31 |
246.3 |
215.0 |
C31 |
C35 |
H35 |
H35A |
138.5 |
145.7 |
C34 |
C35 |
H35 |
H35A |
221.5 |
214.4 |
H35A |
C35 |
C31 |
C34 |
233.3 |
252.5 |
H35A |
C35 |
C31 |
H31 |
359.6 |
360.0 |
C31 |
C35 |
H35A |
H35 |
226.1 |
214.3 |
C34 |
C35 |
H35A |
H35 |
133.9 |
145.6 |
H34 |
C34 |
C31 |
H31 |
354.1 |
359.9 |
C31 |
C34 |
H34 |
C35 |
277.2 |
291.4 |
C31 |
C34 |
H34 |
H34A |
138.6 |
145.7 |
H34 |
C34 |
C35 |
H35 |
120.0 |
145.0 |
H34 |
C34 |
C35 |
H35A |
6.7 |
0.0 |
H34A |
C34 |
C31 |
H31 |
107.4 |
145.0 |
C31 |
C34 |
H34A |
C35 |
92.1 |
68.6 |
C31 |
C34 |
H34A |
H34 |
226.0 |
214.3 |
H34A |
C34 |
C35 |
H35 |
6.7 |
359.9 |
H34A |
C34 |
C35 |
H35A |
253.4 |
215.0 |
C20 |
C21 |
C24 |
H24 |
141.6 |
144.6 |
N28 |
C24 |
C21 |
C29 |
116.2 |
117.2 |
N28 |
C24 |
C21 |
H24 |
238.9 |
238.6 |
C21 |
C24 |
N28 |
HN28 |
65.9 |
68.1 |
C29 |
C24 |
C21 |
H24 |
122.7 |
121.5 |
C21 |
C24 |
C29 |
H29 |
184.1 |
174.1 |
C21 |
C24 |
C29 |
H29A |
303.7 |
294.8 |
C21 |
C24 |
N28 |
C29 |
241.6 |
243.0 |
C21 |
C24 |
N28 |
H24 |
119.0 |
121.4 |
C29 |
C24 |
N28 |
H24 |
237.4 |
238.4 |
N28 |
C24 |
C29 |
H29 |
63.9 |
56.1 |
N28 |
C24 |
C29 |
H29A |
183.6 |
176.9 |
C25 |
N28 |
C24 |
HN28 |
240.0 |
236.5 |
C21 |
C24 |
C29 |
N28 |
120.2 |
117.9 |
C21 |
C24 |
C29 |
H24 |
241.0 |
239.0 |
N28 |
C24 |
C29 |
H24 |
120.9 |
121.1 |
C29 |
C24 |
N28 |
HN28 |
184.3 |
185.1 |
N33 |
C29 |
C24 |
H29 |
240.0 |
240.5 |
N33 |
C29 |
C24 |
H29A |
120.4 |
119.7 |
H29 |
C29 |
C24 |
H29A |
240.4 |
239.2 |
C21 |
C24 |
H24 |
N28 |
238.1 |
239.3 |
C21 |
C24 |
H24 |
C29 |
120.1 |
119.5 |
N28 |
C24 |
H24 |
C29 |
242.0 |
240.2 |
H24 |
C24 |
N28 |
HN28 |
306.9 |
306.7 |
H24 |
C24 |
C29 |
H29 |
303.1 |
295.1 |
H24 |
C24 |
C29 |
H29A |
62.7 |
55.8 |
C25 |
N28 |
C24 |
H24 |
186.9 |
183.2 |
C24 |
N28 |
C25 |
HN28 |
120.0 |
123.5 |
HN28 |
N28 |
C24 |
C29 |
184.3 |
185.1 |
HN28 |
N28 |
C24 |
H24 |
306.9 |
306.7 |
N33 |
C29 |
C24 |
H24 |
183.1 |
175.5 |
C24 |
C29 |
N33 |
H29 |
120.0 |
119.5 |
C24 |
C29 |
N33 |
H29A |
239.6 |
240.4 |
H29 |
C29 |
N33 |
H29A |
119.6 |
120.8 |
H29 |
C29 |
C24 |
H24 |
303.1 |
295.1 |
C24 |
C29 |
H29 |
H29A |
120.4 |
120.8 |
N33 |
C29 |
H29 |
H29A |
239.6 |
239.1 |
H29A |
C29 |
C24 |
H24 |
62.7 |
55.8 |
C24 |
C29 |
H29A |
H29 |
239.7 |
239.3 |
N33 |
C29 |
H29A |
H29 |
120.3 |
120.8 |
C30 |
N33 |
C29 |
H29 |
292.4 |
301.7 |
C30 |
N33 |
C29 |
H29A |
172.8 |
180.9 |
HN33 |
N33 |
C29 |
H29 |
52.5 |
65.6 |
HN33 |
N33 |
C29 |
H29A |
292.9 |
304.8 |
C30 |
C25 |
N28 |
HN28 |
180.5 |
179.8 |
C25 |
C30 |
N33 |
HN33 |
194.9 |
179.9 |
H30 |
C30 |
C25 |
H30A |
119.7 |
119.2 |
H30 |
C30 |
N33 |
HN33 |
314.9 |
300.3 |
C25 |
C30 |
H30 |
H30A |
239.7 |
240.7 |
H30A |
C30 |
N33 |
HN33 |
74.6 |
59.5 |
C25 |
C30 |
H30A |
H30 |
120.2 |
119.3 |
C22 |
C25 |
N28 |
HN28 |
299.0 |
304.4 |
C22 |
C25 |
C30 |
H30 |
163.9 |
169.2 |
C22 |
C25 |
C30 |
H30A |
44.2 |
49.9 |
H25 |
C25 |
N28 |
HN28 |
60.1 |
61.4 |
H25 |
C25 |
C30 |
H30 |
42.7 |
51.2 |
H25 |
C25 |
C30 |
H30A |
283.0 |
291.9 |
C20 |
C22 |
C25 |
H25 |
210.4 |
199.3 |
H22 |
C22 |
C20 |
H22A |
122.8 |
119.3 |
H22 |
C22 |
C25 |
H25 |
330.4 |
319.8 |
C20 |
C22 |
H22 |
H22A |
242.6 |
240.9 |
H22A |
C22 |
C25 |
H25 |
93.3 |
79.2 |
C20 |
C22 |
H22A |
H22 |
118.2 |
119.4 |
C19 |
C20 |
C22 |
H22 |
58.9 |
71.3 |
C19 |
C20 |
C22 |
H22A |
296.1 |
312.1 |
C14 |
C15 |
C17 |
H17 |
180.6 |
180.1 |
H15 |
C15 |
C17 |
H17 |
0.6 |
360.0 |
C16 |
C14 |
C15 |
H15 |
180.6 |
179.8 |
C14 |
C16 |
C18 |
H18 |
180.3 |
180.0 |
H16 |
C16 |
C18 |
H18 |
0.3 |
0.1 |
O13 |
C14 |
C15 |
H15 |
359.7 |
360.0 |
O13 |
C14 |
C16 |
H16 |
359.8 |
0.0 |
H12 |
C12 |
C8 |
H12A |
120.6 |
120.0 |
C8 |
C12 |
H12 |
H12A |
240.7 |
240.0 |
C8 |
C12 |
H12A |
H12 |
119.5 |
120.0 |
O5 |
C8 |
C12 |
H12 |
336.4 |
305.0 |
O5 |
C8 |
C12 |
H12A |
215.7 |
185.0 |
H8 |
C8 |
O5 |
H8A |
119.7 |
120.0 |
C8 |
O5 |
C3 |
C6 |
109.7 |
90.0 |
H8 |
C8 |
C12 |
H12 |
96.3 |
65.0 |
H8 |
C8 |
C12 |
H12A |
335.7 |
305.0 |
O5 |
C8 |
H8 |
H8A |
239.6 |
239.9 |
H8 |
C8 |
O5 |
C3 |
86.3 |
60.0 |
H8A |
C8 |
C12 |
H12 |
216.0 |
185.0 |
H8A |
C8 |
C12 |
H12A |
95.3 |
65.0 |
O5 |
C8 |
H8A |
H8 |
120.2 |
120.1 |
H8A |
C8 |
O5 |
C3 |
326.6 |
300.0 |
C3 |
O5 |
C8 |
H8 |
86.3 |
60.0 |
C3 |
O5 |
C8 |
H8A |
326.6 |
300.0 |
O5 |
C3 |
C6 |
C10 |
180.5 |
180.0 |
O5 |
C3 |
C6 |
CL9 |
1.0 |
0.0 |
CL9 |
C6 |
C3 |
C10 |
180.5 |
180.0 |
C3 |
C6 |
C10 |
H10 |
180.8 |
180.0 |
C3 |
C6 |
C10 |
CL9 |
180.6 |
180.0 |
C7 |
C10 |
C6 |
H10 |
180.0 |
180.0 |
C3 |
C6 |
CL9 |
C10 |
179.4 |
180.0 |
CL9 |
C6 |
C10 |
H10 |
0.2 |
360.0 |
C6 |
C10 |
C7 |
H10 |
180.0 |
180.0 |
C4 |
C7 |
C10 |
H10 |
179.2 |
180.0 |
C11 |
C7 |
C10 |
H10 |
359.6 |
359.9 |
H11A |
C11 |
H11 |
H11B |
120.0 |
120.0 |
H11 |
C11 |
H11A |
H11B |
240.0 |
240.0 |
H11 |
C11 |
H11B |
H11A |
120.0 |
120.0 |
CL1 |
C2 |
C4 |
H4 |
0.6 |
0.0 |