PDB Chemical Component A7R

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for A7R

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
O03 C01 1.485 1.429
O10 P01 1.513 1.480
O04 C02 1.355 1.429
C01 C02 1.523 1.544
C01 C03 1.350 1.544
O12 P02 1.517 1.480
C09 C03 1.474 1.529
C09 O07 1.402 1.430
P01 O07 1.672 1.609
P01 O11 1.511 1.610
P01 O09 1.644 1.610
O13 P02 1.513 1.609
C02 C04 1.611 1.545
C03 O01 1.604 1.445
P02 O09 1.664 1.610
P02 O08 1.658 1.610
O01 C04 1.316 1.444
O15 C18 1.179 1.220
C04 N03 1.477 1.465
O08 C10 1.442 1.429
C18 N03 1.335 1.346
C18 N05 1.313 1.332
N03 C17 1.332 1.363
O05 C05 1.504 1.429
O06 C06 1.471 1.429
N05 C20 1.317 1.328
C14 C12 1.392 1.384
C14 C15 1.393 1.383
C10 C07 1.420 1.531
C17 C19 1.393 1.354
C12 N01 1.323 1.319
C15 C13 1.387 1.400
C20 C19 1.389 1.410
C20 N04 1.453 1.375
C05 C06 1.248 1.545
C05 C07 1.580 1.545
C06 C08 1.656 1.545
C07 O02 1.526 1.444
N01 C08 1.456 1.465
N01 C11 1.332 1.316
C13 C11 1.400 1.396
C13 C16 1.543 1.478
C08 O02 1.319 1.444
C16 O14 1.194 1.216
C16 N02 1.458 1.348
C01 H1 1.100 1.090
C02 H2 1.100 1.090
C03 H3 1.100 1.089
C04 H4 1.100 1.090
C05 H5 1.100 1.090
C06 H6 1.100 1.090
C07 H7 1.100 1.090
C08 H8 1.100 1.090
C09 H9 1.100 1.090
C09 H10 1.099 1.090
C10 H11 1.100 1.090
C10 H12 1.100 1.090
C11 H13 1.080 1.080
C12 H14 1.080 1.080
C14 H15 1.080 1.080
C15 H16 1.080 1.080
C17 H17 1.080 1.080
C19 H18 1.080 1.080
N02 H19 1.000 0.970
N02 H20 1.000 0.970
N04 H21 1.000 0.971
N04 H22 1.000 0.970
O03 H23 0.950 0.967
O04 H24 0.950 0.968
O05 H25 0.950 0.967
O06 H26 0.949 0.967
O11 H27 0.950 0.967
O13 H28 0.950 0.967

Bond Angles for A7R

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
O03 C01 H1 109.8 110.5
O10 P01 O11 110.2 109.5
O04 C02 H2 109.7 110.5
C02 C01 C03 101.5 104.1
C01 C02 C04 101.2 104.1
C02 C01 H1 109.3 110.5
C01 C02 H2 107.4 110.5
C01 C03 O01 104.1 104.8
C03 C01 H1 111.9 110.5
C01 C03 H3 111.4 110.4
O12 P02 O13 111.0 109.5
C09 C03 O01 114.8 110.4
C09 C03 H3 109.5 110.5
O07 C09 H9 109.9 109.4
O07 C09 H10 109.9 109.5
P01 O11 H27 109.5 114.0
P02 O13 H28 109.5 114.0
C02 C04 N03 124.9 110.4
C04 C02 H2 106.5 110.5
C02 C04 H4 100.7 110.4
C03 O01 C04 95.1 105.3
O01 C03 H3 107.8 110.3
O01 C04 H4 103.1 110.5
C04 N03 C18 125.9 119.8
C04 N03 C17 114.8 119.8
N03 C04 H4 101.6 110.3
O08 C10 H11 108.6 109.5
O08 C10 H12 108.6 109.5
N03 C18 N05 122.2 121.1
C18 N05 C20 120.7 120.7
N03 C17 H17 119.8 120.3
O05 C05 H5 110.1 110.6
O06 C06 H6 109.3 110.6
C14 C12 N01 121.6 121.1
C14 C12 H14 119.2 119.5
C15 C14 H15 120.8 120.3
C14 C15 H16 120.1 120.9
C10 C07 O02 112.1 110.4
C10 C07 H7 110.7 110.4
C19 C17 H17 119.7 120.4
C17 C19 H18 121.6 120.5
N01 C12 H14 119.2 119.5
C15 C13 C16 119.5 120.6
C20 C19 H18 121.6 120.5
C20 N04 H21 120.0 119.9
C20 N04 H22 120.0 120.1
C06 C05 C07 105.4 104.1
C05 C06 C08 107.5 104.0
C06 C05 H5 114.5 110.5
C05 C06 H6 112.9 110.5
C05 C07 O02 104.9 104.8
C07 C05 H5 109.1 110.5
C05 C07 H7 108.5 110.4
C06 C08 O02 107.7 104.8
C08 C06 H6 107.0 110.5
C06 C08 H8 105.5 110.4
C07 O02 C08 106.5 105.2
O02 C07 H7 109.2 110.4
N01 C08 O02 113.3 110.4
N01 C08 H8 107.6 110.4
N01 C11 H13 119.0 119.7
C13 C11 H13 118.9 119.7
C13 C16 O14 120.4 120.0
C13 C16 N02 121.2 120.0
O02 C08 H8 109.6 110.4
N02 C16 O14 118.4 120.0
C16 N02 H19 120.0 120.0
C16 N02 H20 120.0 120.0
H9 C09 H10 109.4 109.5
H11 C10 H12 109.5 109.4
H19 N02 H20 120.0 120.0
H21 N04 H22 120.0 120.0

Torsion Angles for A7R

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C02 C01 O03 H1 123.2 122.7
O03 C01 C02 H2 213.1 237.3
C03 C01 O03 H1 236.5 237.3
O03 C01 C03 H3 166.5 146.5
O10 P01 O11 H27 360.0 180.1
O04 C02 C01 H1 96.1 122.7
C01 C02 O04 H2 241.9 237.3
C04 C02 O04 H2 124.3 122.6
O04 C02 C04 H4 206.7 213.6
O03 C01 C02 H1 236.5 237.3
O04 C02 C01 H2 119.5 122.7
C02 C01 C03 O01 43.6 24.0
C03 C01 C02 H1 118.4 118.7
C02 C01 C03 H3 287.7 265.2
C01 C02 C04 N03 197.0 217.2
C04 C02 C01 H2 248.6 241.4
C01 C02 C04 H4 84.6 95.0
O03 C01 C03 H1 122.3 122.7
C03 C01 C02 C04 343.5 0.0
C02 C01 C03 H1 243.5 241.3
C03 C01 C02 H2 94.9 118.6
C09 C03 C01 O01 123.0 118.8
C09 C03 C01 H3 238.9 237.6
C01 C03 O01 C04 300.8 319.5
O01 C03 C01 H3 115.9 118.8
O12 P02 O13 H28 360.0 180.0
C01 C03 C09 O01 243.6 244.7
C09 C03 C01 H1 283.1 261.5
C01 C03 C09 H3 122.2 122.4
C09 C03 O01 C04 181.5 200.7
O01 C03 C09 H3 238.6 237.7
O07 C09 C03 O01 249.0 290.4
O07 C09 C03 H3 10.5 52.7
H9 C09 O07 H10 120.5 120.0
P01 O07 C09 H9 134.4 60.0
P01 O07 C09 H10 13.9 300.1
O04 C02 C04 H2 234.2 237.4
C04 C02 C01 C03 343.5 0.0
C04 C02 C01 H1 225.1 241.3
C01 C02 C04 H2 112.1 118.7
C03 O01 C04 C02 44.0 40.5
O01 C04 C02 H4 253.1 241.0
C02 C04 N03 C18 93.2 300.0
C02 C04 N03 C17 268.7 120.0
N03 C04 C02 H4 112.4 122.2
O01 C03 C01 H1 160.1 142.6
C01 C03 O01 H3 241.6 241.2
C09 C03 O01 H3 122.3 122.4
C03 O01 C04 H4 298.8 281.6
P02 O08 C10 H11 278.9 60.0
P02 O08 C10 H12 37.8 300.0
O01 C04 C02 H2 225.5 217.3
C02 C04 O01 H4 105.2 118.9
C04 O01 C03 H3 59.2 78.3
N03 C04 O01 H4 249.4 237.7
N03 C04 C02 H2 84.9 98.5
C02 C04 N03 H4 248.0 237.8
C03 O01 C04 N03 188.2 159.3
O01 C04 N03 H4 111.4 122.4
C04 N03 C18 N05 177.8 179.5
C04 N03 C17 H17 1.7 0.2
O08 C10 C07 H7 238.7 52.8
H11 C10 O08 H12 241.0 120.0
C04 N03 C18 C17 175.2 180.1
C18 N03 C04 H4 205.2 62.2
N03 C18 N05 C20 358.7 0.8
C18 N03 C17 H17 177.5 180.3
C04 N03 C17 C18 184.3 179.9
C17 N03 C04 H4 20.6 242.3
C19 C17 N03 H17 180.0 179.7
N03 C17 C19 H18 181.3 180.2
C06 C05 O05 H5 125.8 122.7
O05 C05 C06 H6 261.6 237.3
C07 C05 O05 H5 240.1 237.3
O05 C05 C07 H7 99.0 146.5
O06 C06 C05 H5 146.1 122.8
C05 C06 O06 H6 236.5 237.3
C08 C06 O06 H6 118.2 122.7
O06 C06 C08 H8 217.7 213.5
N05 C20 C19 H18 180.0 180.0
N05 C20 N04 H21 360.0 180.1
N05 C20 N04 H22 180.0 360.0
N01 C12 C14 H14 180.0 180.0
C15 C14 C12 N01 359.2 0.2
C15 C14 C12 H14 179.2 180.3
C14 C15 C13 C16 179.6 180.0
C05 C07 C10 O02 242.9 244.6
C10 C07 C05 H5 216.5 261.5
C05 C07 C10 H7 120.7 122.3
C10 C07 O02 C08 255.2 200.6
O02 C07 C10 H7 237.8 237.7
C04 N03 C17 C19 181.7 180.0
N03 C17 C19 H17 180.0 180.3
C20 C19 C17 H18 180.0 180.1
C14 C12 N01 H14 180.0 180.0
C12 N01 C08 O02 317.9 329.7
C12 N01 C08 H8 196.6 207.3
C12 N01 C11 H13 179.5 180.0
C15 C13 C11 H13 180.3 180.0
C15 C13 C16 O14 33.5 180.0
C15 C13 C16 N02 213.5 0.1
C18 N05 C20 C19 0.0 359.5
C20 C19 C17 H17 181.3 180.0
C17 C19 C20 H18 180.0 179.9
C18 N05 C20 N04 179.9 179.4
N04 C20 C19 H18 0.1 0.1
H21 N04 C20 H22 180.0 180.1
O05 C05 C06 H5 236.8 237.3
O06 C06 C05 H6 121.3 122.7
C06 C05 C07 O02 331.6 24.0
C07 C05 C06 H5 120.0 118.6
C06 C05 C07 H7 215.0 265.1
C05 C06 C08 O02 341.8 336.0
C08 C06 C05 H6 242.2 241.4
C05 C06 C08 H8 98.8 94.8
O05 C05 C07 H5 120.5 122.7
C10 C07 C05 O02 121.4 118.8
C10 C07 C05 H7 238.0 237.7
C07 C05 C06 C08 26.9 0.0
C06 C05 C07 H5 236.5 241.4
C07 C05 C06 H6 144.7 118.7
C05 C07 O02 C08 16.0 319.5
O02 C07 C05 H7 116.6 118.9
O06 C06 C08 H6 240.4 237.3
C08 C06 C05 C07 26.9 0.0
C08 C06 C05 H5 267.0 241.4
C05 C06 C08 H6 121.5 118.6
C07 O02 C08 C06 358.7 40.5
N01 C08 C06 O02 234.2 241.2
N01 C08 C06 H8 117.2 122.3
O02 C08 C06 H8 243.1 241.2
C10 C07 O02 H7 123.0 122.3
O02 C07 C05 H5 95.1 142.6
C05 C07 O02 H7 243.8 241.1
C06 C08 O02 C07 358.7 40.5
N01 C08 O02 C07 124.3 159.3
C07 O02 C08 H8 244.5 281.7
C06 C08 N01 O02 122.7 115.4
N01 C08 C06 H6 94.5 98.5
C06 C08 N01 H8 244.0 237.7
C07 O02 C08 N01 124.3 159.3
O02 C08 N01 H8 121.3 122.3
C11 N01 C08 O02 136.3 149.6
C11 N01 C08 H8 15.0 27.3
C13 C11 N01 H13 180.0 179.7
N01 C11 C13 H13 180.0 180.3
C16 C13 C11 H13 0.3 360.0
N02 C16 C13 O14 180.0 180.1
C13 C16 N02 H19 180.0 359.9
C13 C16 N02 H20 360.0 180.0
O02 C08 C06 H6 220.3 217.4
C06 C08 O02 H8 114.2 118.8
C08 O02 C07 H7 132.2 78.3
N01 C08 O02 H8 239.8 237.6
C13 C16 O14 N02 180.0 180.1
O14 C16 N02 H19 0.0 180.0
O14 C16 N02 H20 180.0 0.0
C13 C16 N02 O14 180.0 179.9
H19 N02 C16 H20 180.0 180.0
C02 C01 H1 C03 111.7 114.7
H1 C01 C02 C04 225.1 241.3
H1 C01 C02 H2 336.6 360.0
H1 C01 C03 O01 160.1 142.6
H1 C01 C03 H3 44.2 23.9
H2 C02 C01 C03 94.9 118.6
C01 C02 H2 C04 252.2 245.4
H2 C02 C01 H1 336.6 360.0
H2 C02 C04 N03 84.9 98.5
H2 C02 C04 H4 332.5 336.3
C01 C03 H3 O01 113.6 115.3
H3 C03 C01 H1 44.2 23.9
C09 C03 H3 O01 234.5 237.7
H3 C03 O01 C04 59.2 78.3
C02 C04 H4 N03 129.3 122.2
H4 C04 C02 H2 332.5 336.3
H4 C04 N03 C18 205.2 62.2
H4 C04 N03 C17 20.6 242.3
C06 C05 H5 C07 117.9 114.6
H5 C05 C06 C08 267.0 241.4
H5 C05 C06 H6 24.8 0.0
H5 C05 C07 O02 95.1 142.6
H5 C05 C07 H7 338.4 23.7
H6 C06 C05 C07 144.7 118.7
C05 C06 H6 C08 241.9 245.4
H6 C06 C05 H5 24.8 0.0
H6 C06 C08 O02 220.3 217.4
H6 C06 C08 H8 337.2 336.2
C10 C07 H7 O02 236.1 237.7
C05 C07 H7 O02 113.8 115.4
H7 C07 C05 H5 338.4 23.7
H7 C07 O02 C08 132.2 78.3
C06 C08 H8 O02 244.3 244.6
H8 C08 C06 H6 337.2 336.2
N01 C08 H8 O02 123.6 122.3
H9 C09 C03 O01 8.8 50.4
H9 C09 C03 H3 130.2 172.7
O07 C09 H9 H10 239.2 240.0
H10 C09 C03 O01 129.3 170.4
H10 C09 C03 H3 250.7 292.7
O07 C09 H10 H9 120.8 119.9
O08 C10 H11 H12 118.4 239.9
H11 C10 C07 O02 356.0 50.4
H11 C10 C07 H7 118.2 172.7
O08 C10 H12 H11 241.6 120.0
H12 C10 C07 O02 237.1 170.3
H12 C10 C07 H7 359.2 292.7
C14 C12 H14 N01 180.0 180.0
H15 C14 C12 N01 179.2 180.0
H15 C14 C12 H14 359.2 0.0
H15 C14 C15 H16 0.6 0.0
H16 C15 C14 H15 0.6 0.0
H16 C15 C13 C16 359.6 359.9
H17 C17 C19 H18 1.3 359.9
H18 C19 C17 H17 1.3 359.9
H19 N02 C16 O14 0.0 180.0
C16 N02 H19 H20 180.0 180.0
H20 N02 C16 O14 180.0 0.0
C16 N02 H20 H19 180.0 180.0
C20 N04 H21 H22 180.0 179.9
C20 N04 H22 H21 180.0 180.1
H23 O03 C01 H1 56.8 298.8
H24 O04 C02 H2 298.1 61.3
H25 O05 C05 H5 54.2 298.7
H26 O06 C06 H6 303.5 61.2