PDB Chemical Component A65

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for A65

Atom I Atom J Distance (Experimental Model) Distance (Ideal Model)
C4 C5 1.480 1.507
C4 C2 1.465 1.359
C4 C1 1.496 1.384
C5 O 1.430 1.430
C3 S2 1.777 1.814
C2 S2 1.765 1.763
C2 S1 1.441 1.720
C1 N 1.385 1.305
C1 S 1.716 1.761
S1 N 1.444 1.696
S C 1.790 1.814
C5 H1 1.100 1.091
C5 H2 1.100 1.090
C3 H3 1.100 1.090
C3 H4 1.100 1.091
C3 H5 1.100 1.090
O H6 0.951 0.967
C H8 1.100 1.090
C H9 1.101 1.090
C H10 1.101 1.090

Bond Angles for A65

Atom I Atom J Atom K Angle (Experimental Model) Angle (Ideal Model)
C5 C4 C2 136.1 122.8
C5 C4 C1 123.8 122.7
C4 C5 O 110.8 109.5
C4 C5 H1 109.1 109.5
C4 C5 H2 109.2 109.5
C2 C4 C1 100.1 114.5
C4 C2 S2 130.3 127.2
C4 C2 S1 113.2 105.6
C4 C1 N 112.7 116.7
C4 C1 S 120.5 121.6
O C5 H1 109.1 109.5
O C5 H2 109.1 109.5
C5 O H6 109.5 114.0
C3 S2 C2 105.6 103.0
S2 C3 H3 109.5 109.5
S2 C3 H4 109.5 109.4
S2 C3 H5 109.5 109.4
S2 C2 S1 116.5 127.2
C2 S1 N 105.2 95.8
N C1 S 126.8 121.7
C1 N S1 108.8 107.3
C1 S C 101.2 103.0
S C H8 109.5 109.5
S C H9 109.5 109.4
S C H10 109.5 109.4
H1 C5 H2 109.5 109.5
H3 C3 H4 109.5 109.5
H3 C3 H5 109.4 109.5
H4 C3 H5 109.5 109.5
H8 C H9 109.4 109.5
H8 C H10 109.4 109.5
H9 C H10 109.5 109.5

Torsion Angles for A65

Atom I Atom J Atom K Atom L Angle (Experimental Model) Angle (Ideal Model)
C2 C4 C5 C1 179.4 180.3
C5 C4 C2 S2 0.4 360.0
C5 C4 C2 S1 180.1 180.0
C5 C4 C1 N 180.0 180.0
C5 C4 C1 S 359.7 0.0
O C5 C4 H1 239.8 240.0
O C5 C4 H2 120.2 120.0
C4 C5 O H6 180.0 180.0
H1 C5 C4 H2 240.4 240.0
C5 C4 C2 C1 180.5 179.7
C2 C4 C5 O 94.0 90.0
C2 C4 C5 H1 214.3 210.0
C2 C4 C5 H2 333.8 330.0
C2 C4 C1 N 0.3 359.7
C2 C4 C1 S 180.1 179.8
C3 S2 C2 C4 11.1 180.0
S2 C2 C4 S1 180.3 180.0
C4 C2 S1 N 0.2 359.8
C5 C4 C1 C2 179.6 180.3
C1 C4 C5 O 274.6 269.7
C1 C4 C5 H1 34.8 29.7
C1 C4 C5 H2 154.4 149.7
C1 C4 C2 S2 179.9 180.3
C1 C4 C2 S1 359.7 0.3
N C1 C4 S 180.2 180.0
C4 C1 N S1 359.8 0.1
C4 C1 S C 180.2 180.0
O C5 C4 C2 94.0 90.0
O C5 C4 C1 274.6 269.7
C4 C5 O H1 120.2 120.0
C4 C5 O H2 239.8 240.0
H1 C5 O H2 119.6 120.0
C4 C2 S2 C3 11.1 180.0
C3 S2 C2 S1 191.4 0.0
H3 C3 S2 H4 240.0 240.0
H3 C3 S2 H5 120.0 120.0
H4 C3 S2 H5 240.0 240.0
S2 C2 C4 C1 179.9 180.3
C4 C2 S2 S1 179.7 180.0
C2 S2 C3 H3 180.0 180.0
C2 S2 C3 H4 300.0 300.0
C2 S2 C3 H5 60.0 60.0
S2 C2 S1 N 180.0 179.8
S1 C2 C4 C1 359.7 0.3
C4 C2 S1 S2 180.2 180.0
C1 N S1 C2 0.0 0.0
C4 C1 N S 179.7 180.0
C2 S1 N C1 0.0 0.0
N C1 S C 360.0 0.0
C4 C1 S N 180.3 180.0
S C1 N S1 180.0 180.1
C1 S C H8 180.0 180.0
C1 S C H9 300.0 300.0
C1 S C H10 60.0 60.0
S1 N C1 S 180.0 180.1
H8 C S H9 240.0 240.0
H8 C S H10 120.0 120.0
H9 C S H10 240.0 240.0
H1 C5 C4 C2 214.3 210.0
H1 C5 C4 C1 34.8 29.7
C4 C5 H1 O 238.8 240.0
C4 C5 H1 H2 119.4 120.0
O C5 H1 H2 240.6 240.0
H1 C5 O H6 59.8 60.0
H2 C5 C4 C2 333.8 330.0
H2 C5 C4 C1 154.4 149.7
C4 C5 H2 O 121.3 120.0
C4 C5 H2 H1 240.6 240.0
O C5 H2 H1 119.4 120.0
H2 C5 O H6 300.2 300.0
H3 C3 S2 C2 180.0 180.0
S2 C3 H3 H4 120.0 120.0
S2 C3 H3 H5 240.0 240.0
H4 C3 H3 H5 120.0 120.1
H4 C3 S2 C2 300.0 300.0
S2 C3 H4 H3 240.0 240.0
S2 C3 H4 H5 120.0 119.9
H3 C3 H4 H5 240.0 239.9
H5 C3 S2 C2 60.0 60.0
S2 C3 H5 H3 120.0 120.0
S2 C3 H5 H4 240.0 240.0
H3 C3 H5 H4 120.0 120.1
H6 O C5 H1 59.8 60.0
H6 O C5 H2 300.2 300.0
S C H8 H9 120.0 119.9
S C H8 H10 240.0 240.0
H9 C H8 H10 120.0 120.1
S C H9 H8 240.0 240.0
S C H9 H10 120.0 120.0
H8 C H9 H10 240.0 239.9
S C H10 H8 120.0 120.0
S C H10 H9 240.0 240.1
H8 C H10 H9 120.0 120.1