PDB Chemical Component A5O

Ideal Model

Chemical Description

Name ADENINE ARABINOSE-5'-PHOSPHATE
Formula C10 H14 N5 O7 P
Formal charge 0
Molecular weight 347.221 g/mol
Component type RNA LINKING
Nonstandard Parent Id A

Chemical features

Atom count 37
Chiral atom count 4
Chiral atoms C1' C2' C3' C4'
Observed leaving atoms OP3 HOP3
Bond count 39
Aromatic bond count 10

Chemical Identifiers

Systematic name (ACDLabs) 9-(5-O-phosphono-beta-D-arabinofuranosyl)-9H-purin-6-amine
Systematic name (OpenEye OEToolkits) [(2R,3S,4S,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

Stereo SMILES (CACTVS) Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@@H]3O
SMILES (CACTVS) Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O
Stereo SMILES (OpenEye) c1nc(c2c(n1)n(cn2)[C@H]3[C@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O)N
InChI descriptor InChI=1S/C10H14N5O7P/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(22-10)1-21-23(18,19)20/h2-4,6-7,10,16-17H,1H2,(H2,11,12,13)(H2,18,19,20)/t4-,6-,7+,10-/m1/s1
InChIKey descriptor UDMBCSSLTHHNCD-UHTZMRCNSA-N

Status Information

Last modified 2011-06-04
Created 2009-10-09
Release status REL
Model PDB code 2KP3
Processing site RCSB