PDB Chemical Component A5C

The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.

Bond Distances for A5C

Atom I	Atom J	Distance (Experimental Model)	Distance (Ideal Model)
C6	C5	1.498	1.529
C6	O6	1.381	1.429
C5	O5	1.384	1.429
C5	C4	1.467	1.530
C3	C2	1.438	1.545
C3	O3	1.402	1.429
C3	C4	1.455	1.544
C4	O4	1.427	1.443
C2	C1	1.463	1.545
C2	O2	1.397	1.429
O4	C1	1.378	1.445
C1	O1	1.362	1.429
O2	HO2	0.950	0.967
C6	H61	1.100	1.091
C6	H62	1.099	1.090
C5	H5	1.100	1.090
O6	HO6	0.950	0.967
O5	HO5	0.950	0.967
C4	H4	1.100	1.090
C3	H3	1.100	1.090
C2	H2	1.100	1.090
O3	HO3	0.950	0.967
C1	H1	1.100	1.089
O1	HO1	0.950	0.968

Bond Angles for A5C

Atom I	Atom J	Atom K	Angle (Experimental Model)	Angle (Ideal Model)
C5	C6	O6	117.6	109.5
C6	C5	O5	109.9	109.5
C6	C5	C4	110.2	109.5
C5	C6	H61	106.8	109.5
C5	C6	H62	106.8	109.5
C6	C5	H5	108.9	109.5
O6	C6	H61	106.8	109.5
O6	C6	H62	106.9	109.4
C6	O6	HO6	109.5	114.1
O5	C5	C4	110.0	109.4
O5	C5	H5	109.1	109.4
C5	O5	HO5	109.5	114.0
C5	C4	C3	108.9	110.4
C5	C4	O4	111.4	110.4
C4	C5	H5	108.8	109.5
C5	C4	H4	107.8	110.3
C2	C3	O3	112.5	110.5
C2	C3	C4	104.6	104.1
C3	C2	C1	104.2	104.0
C3	C2	O2	113.8	110.5
C2	C3	H3	110.8	110.5
C3	C2	H2	110.7	110.5
O3	C3	C4	109.7	110.6
O3	C3	H3	105.8	110.5
C3	O3	HO3	109.5	114.1
C3	C4	O4	107.2	104.8
C3	C4	H4	112.0	110.4
C4	C3	H3	113.5	110.6
O4	C4	H4	109.6	110.5
C1	C2	O2	111.0	110.5
C2	C1	O1	110.3	110.3
C1	C2	H2	113.6	110.5
C2	C1	H1	113.5	110.4
C2	O2	HO2	109.5	114.0
O2	C2	H2	103.8	110.6
O4	C1	H1	111.4	110.4
C1	O1	HO1	109.5	114.0
H61	C6	H62	112.0	109.4

Torsion Angles for A5C

Atom I	Atom J	Atom K	Atom L	Angle (Experimental Model)	Angle (Ideal Model)
O6	C6	C5	H61	240.0	240.0
O6	C6	C5	H62	120.0	120.0
C5	C6	O6	HO6	180.0	180.0
O5	C5	C6	C4	121.3	120.0
O5	C5	C6	H5	240.6	240.0
C6	C5	O5	HO5	180.0	300.0
C6	C5	C4	C3	182.5	175.0
C6	C5	C4	O4	64.6	59.6
C4	C5	C6	H5	119.2	120.1
C6	C5	C4	H4	304.3	297.2
H61	C6	C5	H62	240.0	240.0
O6	C6	C5	O5	173.1	295.0
O6	C6	C5	C4	51.7	175.0
C5	C6	O6	H61	120.0	120.1
C5	C6	O6	H62	240.0	240.0
O6	C6	C5	H5	292.5	55.0
H61	C6	O6	H62	120.0	119.9
O5	C5	C6	O6	173.1	295.0
C6	C5	O5	C4	238.5	240.0
O5	C5	C6	H61	293.0	55.0
O5	C5	C6	H62	53.0	175.0
C6	C5	O5	H5	119.3	120.0
O5	C5	C4	C3	61.2	55.0
O5	C5	C4	O4	303.3	299.6
C4	C5	O5	H5	240.8	240.0
O5	C5	C4	H4	183.0	177.3
C4	C5	C6	O6	51.7	175.0
C6	C5	C4	O5	121.3	120.0
C4	C5	C6	H61	171.7	295.1
C4	C5	C6	H62	291.7	55.0
C6	C5	C4	H5	240.7	239.9
O5	C5	C4	H5	119.5	120.0
C4	C5	O5	HO5	301.5	60.0
C2	C3	C4	C5	236.4	217.2
O3	C3	C4	C5	115.6	98.5
C3	C4	C5	O4	118.0	115.4
C3	C4	C5	H4	238.2	237.8
C5	C4	C3	H3	357.4	335.8
O4	C4	C5	H4	120.3	122.3
C5	C4	C3	C2	236.4	217.2
O3	C3	C2	C4	119.0	118.7
O3	C3	C2	H3	241.8	237.5
C2	C3	O3	HO3	180.0	61.4
C2	C3	C4	O4	357.0	336.0
C2	C3	C4	H4	117.3	95.0
C4	C3	C2	H3	122.8	118.8
C1	C2	C3	O2	121.1	118.6
C3	C2	C1	O1	157.9	142.8
C1	C2	C3	H2	237.6	241.3
C3	C2	C1	H1	275.8	265.1
C3	C2	O2	HO2	180.0	180.0
O2	C2	C3	H2	116.5	122.7
C5	C4	C3	O3	115.6	98.5
C2	C3	O3	C4	244.0	245.3
O3	C3	C2	C1	99.0	118.7
O3	C3	C2	O2	337.9	0.0
C2	C3	O3	H3	121.1	122.5
O3	C3	C2	H2	221.4	237.3
O3	C3	C4	O4	236.2	217.4
O3	C3	C4	H4	356.4	336.3
C4	C3	O3	H3	237.1	237.2
C5	C4	C3	O4	239.4	241.1
C3	C4	C5	H5	301.8	295.1
C5	C4	C3	H4	119.2	122.2
C2	C3	C4	O3	120.9	118.7
C4	C3	C2	C1	339.9	360.0
C4	C3	C2	O2	218.9	241.3
C2	C3	C4	H3	239.0	241.4
C4	C3	C2	H2	102.4	118.6
O3	C3	C4	H3	118.2	122.7
C4	C3	O3	HO3	296.0	176.1
O4	C4	C3	H4	239.8	241.0
C5	C4	O4	C3	119.0	118.9
O4	C4	C5	H5	183.8	179.6
C5	C4	O4	H4	240.8	237.8
C3	C4	O4	H4	121.8	118.9
O4	C4	C3	H3	118.0	94.7
C4	O4	C1	H1	83.9	78.4
C1	C2	C3	O3	99.0	118.7
C1	C2	C3	C4	339.9	360.0
C3	C2	C1	O2	237.1	241.4
C1	C2	C3	H3	217.2	241.2
C3	C2	C1	H2	120.5	118.7
C1	C2	O2	HO2	62.8	65.4
O2	C2	C1	H2	243.4	237.3
O4	C1	C2	H1	121.3	118.9
C2	C1	O1	HO1	180.0	180.1
O2	C2	C3	O3	337.9	0.0
O2	C2	C3	C4	218.9	241.3
C3	C2	O2	C1	117.2	114.6
O2	C2	C3	H3	96.1	122.6
C3	C2	O2	H2	239.6	237.3
O2	C2	C1	O1	280.8	261.4
C1	C2	O2	H2	122.4	122.7
O2	C2	C1	H1	38.7	23.7
C5	C4	O4	C1	145.4	159.4
C3	C4	O4	C1	26.4	40.5
O4	C1	C2	H2	276.6	265.3
C2	C1	O4	H1	237.3	241.1
O4	C1	O1	HO1	295.6	295.4
O1	C1	C2	O2	280.8	261.4
O1	C1	C2	H2	37.4	24.1
C2	C1	O1	H1	122.8	122.3
HO2	O2	C2	H2	300.5	302.7
C5	C6	H61	O6	233.3	239.9
H61	C6	C5	O5	293.0	55.0
H61	C6	C5	C4	171.7	295.1
C5	C6	H61	H62	116.6	120.0
H61	C6	C5	H5	52.5	175.0
O6	C6	H61	H62	243.3	240.1
H61	C6	O6	HO6	60.0	59.9
C5	C6	H62	O6	126.7	120.0
H62	C6	C5	O5	53.0	175.0
H62	C6	C5	C4	291.7	55.0
C5	C6	H62	H61	243.4	240.0
H62	C6	C5	H5	172.5	295.0
O6	C6	H62	H61	116.7	119.9
H62	C6	O6	HO6	300.0	300.0
H5	C5	C6	O6	292.5	55.0
C6	C5	H5	O5	240.1	240.0
C6	C5	H5	C4	120.1	120.1
H5	C5	C6	H61	52.5	175.0
H5	C5	C6	H62	172.5	295.0
O5	C5	H5	C4	240.0	240.0
H5	C5	O5	HO5	60.8	180.0
H5	C5	C4	C3	301.8	295.1
H5	C5	C4	O4	183.8	179.6
H5	C5	C4	H4	63.6	57.3
HO6	O6	C6	H61	60.0	59.9
HO6	O6	C6	H62	300.0	300.0
HO5	O5	C5	C4	301.5	60.0
HO5	O5	C5	H5	60.8	180.0
C5	C4	H4	C3	240.2	237.8
C5	C4	H4	O4	121.4	122.3
H4	C4	C5	H5	63.6	57.3
C3	C4	H4	O4	241.2	244.5
H4	C4	C3	H3	238.2	213.7
C2	C3	H3	O3	237.8	237.5
C2	C3	H3	C4	117.4	114.7
H3	C3	C2	C1	217.2	241.2
H3	C3	C2	O2	96.1	122.6
H3	C3	C2	H2	339.6	359.9
O3	C3	H3	C4	239.6	237.2
H3	C3	O3	HO3	58.9	298.9
H3	C3	C4	O4	118.0	94.7
H3	C3	C4	H4	238.2	213.7
H2	C2	C3	O3	221.4	237.3
H2	C2	C3	C4	102.4	118.6
C3	C2	H2	C1	243.2	245.3
C3	C2	H2	O2	122.5	122.7
H2	C2	C3	H3	339.6	359.9
C1	C2	H2	O2	239.3	237.3
H2	C2	C1	O1	37.4	24.1
H2	C2	C1	H1	155.2	146.4
H2	C2	O2	HO2	300.5	302.7
HO3	O3	C3	C4	296.0	176.1
HO3	O3	C3	H3	58.9	298.9
H1	C1	C2	O2	38.7	23.7
C2	C1	H1	O1	239.3	237.7
H1	C1	C2	H2	155.2	146.4
H1	C1	O1	HO1	57.1	57.8