PDB Chemical Component A42
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for A42
| Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
| C1 |
C6 |
1.442 |
1.395 |
| C1 |
N2 |
1.384 |
1.333 |
| C1 |
C7 |
1.399 |
1.433 |
| N2 |
C3 |
1.384 |
1.316 |
| C3 |
C4 |
1.441 |
1.396 |
| C3 |
H3 |
1.080 |
1.080 |
| C4 |
N9 |
1.389 |
1.390 |
| C4 |
N5 |
1.408 |
1.327 |
| N5 |
C6 |
1.398 |
1.320 |
| C6 |
H6 |
1.080 |
1.080 |
| C7 |
N8 |
1.163 |
1.136 |
| N9 |
C10 |
1.372 |
1.348 |
| N9 |
HN9 |
1.000 |
0.970 |
| C10 |
O11 |
1.229 |
1.215 |
| C10 |
N12 |
1.397 |
1.348 |
| N12 |
C13 |
1.414 |
1.403 |
| N12 |
HN12 |
1.000 |
0.970 |
| C13 |
C14 |
1.472 |
1.388 |
| C13 |
C18 |
1.461 |
1.393 |
| C14 |
C15 |
1.433 |
1.382 |
| C14 |
H14 |
1.080 |
1.080 |
| C15 |
CL1 |
1.746 |
1.735 |
| C15 |
C16 |
1.450 |
1.388 |
| C16 |
O21 |
1.420 |
1.360 |
| C16 |
C17 |
1.449 |
1.387 |
| C17 |
C18 |
1.455 |
1.386 |
| C17 |
H17 |
1.080 |
1.080 |
| C18 |
O19 |
1.416 |
1.360 |
| O19 |
C20 |
1.426 |
1.429 |
| C20 |
H201 |
1.100 |
1.090 |
| C20 |
H202 |
1.101 |
1.090 |
| C20 |
H203 |
1.100 |
1.090 |
| O21 |
C22 |
1.429 |
1.429 |
| C22 |
H221 |
1.099 |
1.090 |
| C22 |
H222 |
1.100 |
1.090 |
| C22 |
H223 |
1.100 |
1.090 |
Bond Angles for A42
| Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N2 |
C1 |
C6 |
120.7 |
120.0 |
| C6 |
C1 |
C7 |
120.8 |
120.0 |
| C1 |
C6 |
N5 |
120.6 |
120.0 |
| C1 |
C6 |
H6 |
119.7 |
120.0 |
| N2 |
C1 |
C7 |
118.6 |
120.0 |
| C1 |
N2 |
C3 |
118.9 |
119.9 |
| C1 |
C7 |
N8 |
177.0 |
180.0 |
| N2 |
C3 |
C4 |
121.6 |
120.1 |
| N2 |
C3 |
H3 |
119.2 |
120.0 |
| C4 |
C3 |
H3 |
119.2 |
120.0 |
| C3 |
C4 |
N9 |
121.2 |
120.0 |
| C3 |
C4 |
N5 |
119.5 |
120.0 |
| N5 |
C4 |
N9 |
119.4 |
120.0 |
| C4 |
N9 |
C10 |
133.3 |
120.0 |
| C4 |
N9 |
HN9 |
113.4 |
120.0 |
| C4 |
N5 |
C6 |
118.7 |
120.0 |
| N5 |
C6 |
H6 |
119.7 |
120.0 |
| C10 |
N9 |
HN9 |
113.4 |
120.0 |
| N9 |
C10 |
O11 |
118.2 |
120.0 |
| N9 |
C10 |
N12 |
118.2 |
119.9 |
| O11 |
C10 |
N12 |
123.4 |
120.0 |
| C10 |
N12 |
C13 |
130.8 |
120.0 |
| C10 |
N12 |
HN12 |
114.6 |
120.1 |
| C13 |
N12 |
HN12 |
114.6 |
120.0 |
| N12 |
C13 |
C14 |
122.6 |
120.0 |
| N12 |
C13 |
C18 |
119.8 |
120.0 |
| C14 |
C13 |
C18 |
117.6 |
119.9 |
| C13 |
C14 |
C15 |
121.6 |
120.1 |
| C13 |
C14 |
H14 |
119.2 |
120.0 |
| C13 |
C18 |
C17 |
119.4 |
119.9 |
| C13 |
C18 |
O19 |
128.8 |
120.1 |
| C15 |
C14 |
H14 |
119.2 |
120.0 |
| C14 |
C15 |
CL1 |
117.5 |
120.0 |
| C14 |
C15 |
C16 |
121.4 |
120.1 |
| C16 |
C15 |
CL1 |
121.1 |
120.0 |
| C15 |
C16 |
O21 |
119.2 |
120.0 |
| C15 |
C16 |
C17 |
117.2 |
120.0 |
| C17 |
C16 |
O21 |
123.7 |
120.0 |
| C16 |
O21 |
C22 |
117.9 |
117.0 |
| C16 |
C17 |
C18 |
122.9 |
120.0 |
| C16 |
C17 |
H17 |
118.6 |
120.0 |
| C18 |
C17 |
H17 |
118.5 |
120.0 |
| C17 |
C18 |
O19 |
111.8 |
120.1 |
| C18 |
O19 |
C20 |
122.2 |
117.0 |
| O19 |
C20 |
H201 |
109.5 |
109.5 |
| O19 |
C20 |
H202 |
109.5 |
109.5 |
| O19 |
C20 |
H203 |
109.4 |
109.4 |
| H201 |
C20 |
H202 |
109.5 |
109.5 |
| H201 |
C20 |
H203 |
109.5 |
109.5 |
| H202 |
C20 |
H203 |
109.5 |
109.5 |
| O21 |
C22 |
H221 |
109.5 |
109.5 |
| O21 |
C22 |
H222 |
109.5 |
109.5 |
| O21 |
C22 |
H223 |
109.4 |
109.4 |
| H221 |
C22 |
H222 |
109.5 |
109.5 |
| H221 |
C22 |
H223 |
109.5 |
109.4 |
| H222 |
C22 |
H223 |
109.5 |
109.5 |
Torsion Angles for A42
| Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
| N2 |
C1 |
C6 |
C7 |
180.1 |
179.7 |
| C6 |
C1 |
N2 |
C3 |
360.0 |
360.0 |
| C6 |
C1 |
C7 |
N8 |
236.6 |
230.3 |
| C4 |
N5 |
C6 |
C1 |
360.0 |
0.1 |
| N5 |
C6 |
C1 |
H6 |
180.0 |
180.0 |
| C6 |
C1 |
N2 |
C7 |
179.9 |
180.3 |
| N2 |
C1 |
C6 |
N5 |
0.0 |
360.0 |
| N2 |
C1 |
C6 |
H6 |
180.0 |
180.0 |
| N2 |
C1 |
C7 |
N8 |
56.4 |
50.6 |
| C1 |
N2 |
C3 |
C4 |
0.0 |
360.0 |
| C1 |
N2 |
C3 |
H3 |
180.1 |
180.0 |
| N2 |
C1 |
C7 |
C6 |
179.9 |
180.3 |
| C7 |
C1 |
C6 |
N5 |
179.9 |
180.3 |
| C7 |
C1 |
C6 |
H6 |
359.9 |
0.3 |
| C7 |
C1 |
N2 |
C3 |
180.1 |
179.7 |
| C3 |
N2 |
C1 |
C6 |
360.0 |
360.0 |
| C3 |
N2 |
C1 |
C7 |
180.1 |
179.7 |
| C4 |
C3 |
N2 |
H3 |
180.0 |
180.0 |
| N2 |
C3 |
C4 |
N9 |
180.3 |
180.0 |
| N2 |
C3 |
C4 |
N5 |
360.0 |
0.1 |
| N2 |
C3 |
C4 |
H3 |
180.0 |
180.0 |
| N5 |
C4 |
C3 |
N9 |
179.7 |
180.1 |
| C3 |
C4 |
N9 |
C10 |
184.3 |
175.0 |
| C3 |
C4 |
N9 |
HN9 |
4.4 |
355.0 |
| C3 |
C4 |
N5 |
C6 |
0.0 |
359.9 |
| N2 |
C3 |
H3 |
C4 |
180.0 |
180.0 |
| H3 |
C3 |
C4 |
N9 |
0.3 |
360.0 |
| H3 |
C3 |
C4 |
N5 |
179.9 |
180.1 |
| N9 |
C4 |
C3 |
H3 |
0.3 |
360.0 |
| C3 |
C4 |
N9 |
N5 |
179.7 |
180.1 |
| N9 |
C4 |
N5 |
C6 |
179.7 |
180.0 |
| C10 |
N9 |
C4 |
HN9 |
180.0 |
180.0 |
| C4 |
N9 |
C10 |
O11 |
159.7 |
5.1 |
| C4 |
N9 |
C10 |
N12 |
344.2 |
185.0 |
| C1 |
C6 |
N5 |
C4 |
360.0 |
0.1 |
| N5 |
C4 |
C3 |
H3 |
179.9 |
180.1 |
| C3 |
C4 |
N5 |
N9 |
180.3 |
179.9 |
| N5 |
C4 |
N9 |
C10 |
4.7 |
354.9 |
| N5 |
C4 |
N9 |
HN9 |
184.7 |
174.9 |
| C4 |
N5 |
C6 |
H6 |
180.0 |
180.1 |
| N5 |
C6 |
C1 |
C7 |
179.9 |
180.3 |
| C1 |
C6 |
N5 |
H6 |
180.0 |
180.0 |
| C6 |
N5 |
C4 |
N9 |
179.7 |
180.0 |
| H6 |
C6 |
C1 |
C7 |
359.9 |
0.3 |
| C1 |
C6 |
H6 |
N5 |
180.0 |
180.0 |
| C4 |
N9 |
C10 |
HN9 |
180.0 |
180.0 |
| O11 |
C10 |
N9 |
N12 |
175.4 |
180.0 |
| N9 |
C10 |
N12 |
C13 |
206.2 |
185.6 |
| N9 |
C10 |
N12 |
HN12 |
26.2 |
5.6 |
| C4 |
N9 |
HN9 |
C10 |
180.0 |
180.0 |
| HN9 |
N9 |
C10 |
O11 |
339.7 |
185.1 |
| HN9 |
N9 |
C10 |
N12 |
164.2 |
5.1 |
| O11 |
C10 |
N9 |
HN9 |
339.7 |
185.1 |
| N9 |
C10 |
O11 |
N12 |
184.8 |
180.0 |
| O11 |
C10 |
N12 |
C13 |
31.0 |
5.6 |
| O11 |
C10 |
N12 |
HN12 |
211.0 |
185.6 |
| N12 |
C10 |
N9 |
HN9 |
164.2 |
5.1 |
| N9 |
C10 |
N12 |
O11 |
175.2 |
180.0 |
| C13 |
N12 |
C10 |
HN12 |
180.0 |
180.0 |
| C10 |
N12 |
C13 |
C14 |
340.8 |
24.8 |
| C10 |
N12 |
C13 |
C18 |
161.1 |
204.5 |
| C10 |
N12 |
C13 |
HN12 |
180.0 |
180.0 |
| C14 |
C13 |
N12 |
C18 |
179.6 |
180.2 |
| N12 |
C13 |
C14 |
C15 |
180.1 |
180.0 |
| N12 |
C13 |
C14 |
H14 |
0.1 |
0.1 |
| N12 |
C13 |
C18 |
C17 |
179.9 |
179.7 |
| N12 |
C13 |
C18 |
O19 |
359.7 |
360.0 |
| C10 |
N12 |
HN12 |
C13 |
180.0 |
180.0 |
| HN12 |
N12 |
C13 |
C14 |
160.8 |
204.8 |
| HN12 |
N12 |
C13 |
C18 |
341.2 |
24.6 |
| C14 |
C13 |
N12 |
HN12 |
160.8 |
204.8 |
| N12 |
C13 |
C14 |
C18 |
180.4 |
179.8 |
| C14 |
C13 |
C18 |
C17 |
0.2 |
359.5 |
| C14 |
C13 |
C18 |
O19 |
180.0 |
179.8 |
| C15 |
C14 |
C13 |
H14 |
180.0 |
179.9 |
| C13 |
C14 |
C15 |
CL1 |
180.2 |
180.0 |
| C13 |
C14 |
C15 |
C16 |
0.3 |
0.0 |
| C18 |
C13 |
N12 |
HN12 |
341.2 |
24.6 |
| N12 |
C13 |
C18 |
C14 |
179.7 |
180.2 |
| C18 |
C13 |
C14 |
C15 |
359.8 |
0.2 |
| C18 |
C13 |
C14 |
H14 |
179.8 |
180.3 |
| C16 |
C17 |
C18 |
C13 |
359.7 |
0.6 |
| C13 |
C18 |
C17 |
H17 |
179.6 |
180.3 |
| C17 |
C18 |
C13 |
O19 |
180.2 |
179.7 |
| C13 |
C18 |
O19 |
C20 |
71.4 |
180.0 |
| C15 |
C14 |
C13 |
C18 |
359.8 |
0.2 |
| C13 |
C14 |
C15 |
H14 |
180.0 |
180.1 |
| C16 |
C15 |
C14 |
CL1 |
180.1 |
180.0 |
| C14 |
C15 |
C16 |
O21 |
180.1 |
180.0 |
| C14 |
C15 |
C16 |
C17 |
359.6 |
0.0 |
| H14 |
C14 |
C13 |
C18 |
179.8 |
180.3 |
| C13 |
C14 |
H14 |
C15 |
180.0 |
179.9 |
| H14 |
C14 |
C15 |
CL1 |
0.2 |
360.0 |
| H14 |
C14 |
C15 |
C16 |
180.3 |
180.0 |
| CL1 |
C15 |
C14 |
H14 |
0.2 |
360.0 |
| C14 |
C15 |
CL1 |
C16 |
180.1 |
180.0 |
| CL1 |
C15 |
C16 |
O21 |
0.2 |
360.0 |
| CL1 |
C15 |
C16 |
C17 |
179.7 |
180.0 |
| C16 |
C15 |
C14 |
H14 |
180.3 |
180.0 |
| C14 |
C15 |
C16 |
CL1 |
179.9 |
180.0 |
| C17 |
C16 |
C15 |
O21 |
179.6 |
180.0 |
| C15 |
C16 |
O21 |
C22 |
252.8 |
180.0 |
| C15 |
C16 |
C17 |
C18 |
0.4 |
359.7 |
| C15 |
C16 |
C17 |
H17 |
180.4 |
180.0 |
| O21 |
C16 |
C15 |
CL1 |
0.2 |
360.0 |
| C15 |
C16 |
O21 |
C17 |
179.5 |
180.0 |
| O21 |
C16 |
C17 |
C18 |
179.9 |
179.7 |
| O21 |
C16 |
C17 |
H17 |
360.0 |
0.0 |
| C16 |
O21 |
C22 |
H221 |
84.8 |
59.9 |
| C16 |
O21 |
C22 |
H222 |
204.8 |
180.0 |
| C16 |
O21 |
C22 |
H223 |
324.8 |
300.0 |
| C13 |
C18 |
C17 |
C16 |
359.7 |
0.6 |
| C17 |
C16 |
C15 |
CL1 |
179.7 |
180.0 |
| C15 |
C16 |
C17 |
O21 |
180.5 |
180.0 |
| C17 |
C16 |
O21 |
C22 |
73.3 |
360.0 |
| C18 |
C17 |
C16 |
H17 |
180.0 |
179.7 |
| C16 |
C17 |
C18 |
O19 |
179.8 |
180.3 |
| C13 |
C18 |
C17 |
O19 |
179.8 |
180.3 |
| C18 |
C17 |
C16 |
O21 |
179.9 |
179.7 |
| C16 |
C17 |
C18 |
H17 |
180.0 |
180.3 |
| C17 |
C18 |
O19 |
C20 |
251.2 |
0.3 |
| H17 |
C17 |
C16 |
O21 |
360.0 |
0.0 |
| C16 |
C17 |
H17 |
C18 |
180.0 |
179.7 |
| H17 |
C17 |
C18 |
O19 |
359.8 |
0.0 |
| C13 |
C18 |
O19 |
C17 |
180.2 |
179.7 |
| O19 |
C18 |
C17 |
H17 |
359.8 |
0.0 |
| C18 |
O19 |
C20 |
H201 |
202.5 |
300.0 |
| C18 |
O19 |
C20 |
H202 |
322.5 |
60.0 |
| C18 |
O19 |
C20 |
H203 |
82.5 |
180.0 |
| H201 |
C20 |
O19 |
H202 |
240.0 |
240.0 |
| H201 |
C20 |
O19 |
H203 |
120.0 |
120.0 |
| H202 |
C20 |
O19 |
H203 |
240.0 |
240.0 |
| O19 |
C20 |
H201 |
H202 |
120.0 |
120.0 |
| O19 |
C20 |
H201 |
H203 |
240.0 |
240.1 |
| H202 |
C20 |
H201 |
H203 |
120.0 |
120.0 |
| O19 |
C20 |
H202 |
H201 |
240.0 |
240.0 |
| O19 |
C20 |
H202 |
H203 |
120.0 |
120.0 |
| H201 |
C20 |
H202 |
H203 |
240.0 |
240.0 |
| O19 |
C20 |
H203 |
H201 |
120.0 |
120.0 |
| O19 |
C20 |
H203 |
H202 |
240.0 |
240.0 |
| H201 |
C20 |
H203 |
H202 |
120.0 |
120.0 |
| H221 |
C22 |
O21 |
H222 |
240.0 |
240.0 |
| H221 |
C22 |
O21 |
H223 |
120.0 |
120.0 |
| H222 |
C22 |
O21 |
H223 |
240.0 |
240.0 |
| O21 |
C22 |
H221 |
H222 |
120.0 |
120.0 |
| O21 |
C22 |
H221 |
H223 |
240.0 |
240.0 |
| H222 |
C22 |
H221 |
H223 |
120.0 |
120.0 |
| O21 |
C22 |
H222 |
H221 |
240.0 |
239.9 |
| O21 |
C22 |
H222 |
H223 |
120.0 |
120.0 |
| H221 |
C22 |
H222 |
H223 |
240.0 |
240.0 |
| O21 |
C22 |
H223 |
H221 |
120.0 |
120.0 |
| O21 |
C22 |
H223 |
H222 |
240.0 |
240.0 |
| H221 |
C22 |
H223 |
H222 |
120.0 |
120.0 |