PDB Chemical Component A3V
The following tables include covalent bond distance, bond angle and torsion angle values for the experimental model and ideal geometries stored in the definition for this chemical component.
Bond Distances for A3V
Atom I |
Atom J |
Distance (Experimental Model) |
Distance (Ideal Model) |
C11 |
C10 |
1.528 |
1.530 |
C11 |
C12 |
1.520 |
1.530 |
C10 |
C9 |
1.513 |
1.531 |
C12 |
C13 |
1.514 |
1.531 |
N |
C |
1.438 |
1.469 |
C9 |
C8 |
1.513 |
1.530 |
C9 |
C14 |
1.532 |
1.530 |
C |
C1 |
1.515 |
1.530 |
C13 |
C14 |
1.530 |
1.530 |
C8 |
O1 |
1.424 |
1.429 |
C1 |
C2 |
1.514 |
1.530 |
O |
C2 |
1.428 |
1.429 |
O1 |
C7 |
1.365 |
1.359 |
C15 |
C7 |
1.402 |
1.387 |
C15 |
C3 |
1.394 |
1.382 |
C2 |
C3 |
1.519 |
1.507 |
C7 |
C6 |
1.373 |
1.388 |
C3 |
C4 |
1.377 |
1.382 |
C6 |
C5 |
1.374 |
1.381 |
C4 |
C5 |
1.376 |
1.383 |
O |
H1 |
0.951 |
0.967 |
C2 |
H2 |
1.100 |
1.089 |
C1 |
H3 |
1.100 |
1.090 |
C1 |
H4 |
1.100 |
1.091 |
C |
H5 |
1.101 |
1.090 |
C |
H6 |
1.100 |
1.091 |
N |
H7 |
1.000 |
1.009 |
N |
H8 |
1.000 |
1.009 |
C15 |
H10 |
1.080 |
1.079 |
C6 |
H11 |
1.080 |
1.080 |
C5 |
H12 |
1.080 |
1.080 |
C4 |
H13 |
1.079 |
1.081 |
C8 |
H14 |
1.100 |
1.090 |
C8 |
H15 |
1.099 |
1.090 |
C9 |
H16 |
1.099 |
1.090 |
C14 |
H17 |
1.100 |
1.089 |
C14 |
H18 |
1.100 |
1.090 |
C13 |
H19 |
1.100 |
1.090 |
C13 |
H20 |
1.100 |
1.090 |
C12 |
H21 |
1.100 |
1.090 |
C12 |
H22 |
1.100 |
1.090 |
C11 |
H23 |
1.100 |
1.090 |
C11 |
H24 |
1.100 |
1.089 |
C10 |
H25 |
1.100 |
1.090 |
C10 |
H26 |
1.100 |
1.089 |
Bond Angles for A3V
Atom I |
Atom J |
Atom K |
Angle (Experimental Model) |
Angle (Ideal Model) |
C10 |
C11 |
H23 |
108.9 |
109.4 |
C10 |
C11 |
H24 |
108.9 |
109.5 |
C11 |
C10 |
H25 |
109.1 |
109.5 |
C11 |
C10 |
H26 |
109.1 |
109.5 |
C11 |
C12 |
H21 |
109.1 |
109.5 |
C11 |
C12 |
H22 |
109.1 |
109.5 |
C10 |
C9 |
H16 |
108.3 |
109.4 |
C12 |
C13 |
H19 |
108.8 |
109.4 |
C12 |
C13 |
H20 |
108.8 |
109.5 |
N |
C |
H5 |
107.2 |
109.5 |
N |
C |
H6 |
107.1 |
109.5 |
C9 |
C8 |
H14 |
110.8 |
109.5 |
C9 |
C8 |
H15 |
110.8 |
109.5 |
C14 |
C9 |
H16 |
108.1 |
109.5 |
C9 |
C14 |
H17 |
108.3 |
109.5 |
C9 |
C14 |
H18 |
108.3 |
109.5 |
C |
C1 |
H3 |
108.1 |
109.5 |
C |
C1 |
H4 |
108.1 |
109.5 |
C13 |
C14 |
H17 |
108.4 |
109.5 |
C13 |
C14 |
H18 |
108.4 |
109.4 |
C1 |
C2 |
C3 |
113.9 |
109.4 |
C1 |
C2 |
H2 |
106.8 |
109.4 |
O |
C2 |
C3 |
112.0 |
109.5 |
C2 |
O |
H1 |
109.5 |
114.0 |
O |
C2 |
H2 |
107.8 |
109.5 |
C15 |
C7 |
C6 |
120.3 |
119.9 |
C7 |
C15 |
H10 |
120.1 |
120.0 |
C15 |
C3 |
C4 |
118.7 |
120.1 |
C2 |
C3 |
C4 |
118.3 |
120.0 |
C3 |
C2 |
H2 |
106.7 |
109.5 |
C7 |
C6 |
C5 |
119.3 |
120.0 |
C7 |
C6 |
H11 |
120.3 |
120.0 |
C3 |
C4 |
C5 |
120.9 |
120.1 |
C3 |
C4 |
H13 |
119.6 |
120.0 |
C5 |
C6 |
H11 |
120.4 |
120.0 |
C6 |
C5 |
H12 |
119.5 |
120.0 |
C4 |
C5 |
H12 |
119.5 |
120.0 |
H3 |
C1 |
H4 |
109.5 |
109.5 |
H5 |
C |
H6 |
109.5 |
109.5 |
H7 |
N |
H8 |
109.5 |
111.0 |
H14 |
C8 |
H15 |
109.5 |
109.5 |
H17 |
C14 |
H18 |
109.5 |
109.5 |
H19 |
C13 |
H20 |
109.5 |
109.5 |
H21 |
C12 |
H22 |
109.5 |
109.5 |
H23 |
C11 |
H24 |
109.5 |
109.5 |
H25 |
C10 |
H26 |
109.5 |
109.5 |
Torsion Angles for A3V
Atom I |
Atom J |
Atom K |
Atom L |
Angle (Experimental Model) |
Angle (Ideal Model) |
C10 |
C11 |
C12 |
H21 |
64.7 |
180.0 |
C10 |
C11 |
C12 |
H22 |
184.3 |
60.0 |
C11 |
C10 |
C9 |
H16 |
59.8 |
60.1 |
H23 |
C11 |
C10 |
H24 |
240.6 |
120.0 |
H25 |
C10 |
C11 |
H26 |
240.5 |
120.1 |
C11 |
C12 |
C13 |
H19 |
171.4 |
300.0 |
C11 |
C12 |
C13 |
H20 |
290.6 |
180.0 |
H21 |
C12 |
C11 |
H22 |
240.4 |
120.0 |
C10 |
C9 |
C8 |
H14 |
306.5 |
175.0 |
C10 |
C9 |
C8 |
H15 |
68.2 |
55.0 |
C14 |
C9 |
C10 |
H16 |
242.8 |
240.0 |
C10 |
C9 |
C14 |
H17 |
174.9 |
180.0 |
C10 |
C9 |
C14 |
H18 |
293.6 |
300.0 |
C12 |
C13 |
C14 |
H17 |
187.5 |
180.0 |
C12 |
C13 |
C14 |
H18 |
68.8 |
60.0 |
H19 |
C13 |
C12 |
H20 |
240.8 |
120.0 |
N |
C |
C1 |
H3 |
74.8 |
60.0 |
N |
C |
C1 |
H4 |
193.2 |
300.0 |
H5 |
C |
N |
H6 |
242.6 |
120.0 |
H14 |
C8 |
C9 |
H15 |
238.2 |
120.0 |
C10 |
C9 |
C14 |
H16 |
117.4 |
120.0 |
C14 |
C9 |
C8 |
H14 |
184.5 |
55.0 |
C14 |
C9 |
C8 |
H15 |
306.3 |
295.0 |
C13 |
C14 |
C9 |
H17 |
239.4 |
240.0 |
C13 |
C14 |
C9 |
H18 |
120.6 |
120.0 |
H17 |
C14 |
C9 |
H18 |
241.3 |
240.0 |
C |
C1 |
C2 |
C3 |
187.5 |
185.0 |
C |
C1 |
C2 |
H2 |
304.9 |
305.0 |
H3 |
C1 |
C |
H4 |
241.6 |
120.0 |
C13 |
C14 |
C9 |
H16 |
296.9 |
300.0 |
C9 |
C14 |
C13 |
H17 |
120.6 |
120.0 |
C9 |
C14 |
C13 |
H18 |
239.4 |
240.0 |
H17 |
C14 |
C13 |
H18 |
118.7 |
120.0 |
O |
C2 |
C1 |
C3 |
233.9 |
240.0 |
C1 |
C2 |
O |
H1 |
180.0 |
60.0 |
O |
C2 |
C1 |
H2 |
116.4 |
120.0 |
C1 |
C2 |
C3 |
C4 |
131.9 |
280.0 |
C3 |
C2 |
C1 |
H2 |
242.5 |
240.0 |
C1 |
C2 |
O |
C3 |
127.2 |
120.0 |
C1 |
C2 |
O |
H2 |
244.3 |
240.0 |
O |
C2 |
C3 |
C4 |
256.6 |
40.0 |
C3 |
C2 |
O |
H2 |
117.1 |
120.0 |
O1 |
C7 |
C15 |
H10 |
358.8 |
360.0 |
O1 |
C7 |
C6 |
H11 |
359.5 |
0.1 |
C7 |
C15 |
C3 |
C4 |
1.8 |
0.3 |
C15 |
C7 |
C6 |
C5 |
359.8 |
360.0 |
C15 |
C7 |
C6 |
H11 |
179.8 |
180.0 |
C2 |
C3 |
C15 |
C4 |
183.4 |
179.7 |
C15 |
C3 |
C2 |
H2 |
190.9 |
340.3 |
C15 |
C3 |
C4 |
C5 |
359.6 |
359.4 |
C15 |
C3 |
C4 |
H13 |
179.6 |
179.7 |
C1 |
C2 |
C3 |
H2 |
117.5 |
119.9 |
C3 |
C2 |
O |
H1 |
52.8 |
300.0 |
O |
C2 |
C3 |
H2 |
242.3 |
240.0 |
C15 |
C3 |
C2 |
C4 |
176.6 |
180.3 |
C2 |
C3 |
C4 |
C5 |
176.3 |
179.7 |
C2 |
C3 |
C4 |
H13 |
356.3 |
0.0 |
C6 |
C7 |
C15 |
H10 |
178.5 |
180.1 |
C5 |
C6 |
C7 |
H11 |
180.0 |
179.9 |
C7 |
C6 |
C5 |
H12 |
181.6 |
180.1 |
C4 |
C3 |
C2 |
H2 |
14.3 |
160.0 |
C3 |
C4 |
C5 |
H12 |
178.7 |
180.2 |
C7 |
C6 |
C5 |
H11 |
180.0 |
180.1 |
C3 |
C4 |
C5 |
C6 |
358.7 |
0.6 |
C4 |
C5 |
C6 |
H12 |
180.0 |
179.7 |
C3 |
C4 |
C5 |
H13 |
180.0 |
180.3 |
C4 |
C5 |
C6 |
H11 |
181.6 |
179.7 |
C6 |
C5 |
C4 |
H12 |
180.0 |
180.3 |
H1 |
O |
C2 |
C3 |
52.8 |
300.0 |
H1 |
O |
C2 |
H2 |
295.7 |
180.0 |
C1 |
C2 |
H2 |
C3 |
237.8 |
240.1 |
O |
C2 |
H2 |
C3 |
120.4 |
120.0 |
H2 |
C2 |
O |
H1 |
295.7 |
180.0 |
H2 |
C2 |
C3 |
C4 |
14.3 |
160.0 |
C |
C1 |
H3 |
H4 |
117.5 |
240.0 |
H3 |
C1 |
C2 |
C3 |
66.7 |
305.0 |
H3 |
C1 |
C2 |
H2 |
184.2 |
64.9 |
C |
C1 |
H4 |
H3 |
242.4 |
120.0 |
H4 |
C1 |
C2 |
C3 |
308.2 |
65.0 |
H4 |
C1 |
C2 |
H2 |
65.7 |
185.0 |
N |
C |
H5 |
H6 |
115.9 |
240.0 |
H5 |
C |
C1 |
H3 |
313.5 |
180.0 |
H5 |
C |
C1 |
H4 |
71.9 |
60.0 |
N |
C |
H6 |
H5 |
244.1 |
120.0 |
H6 |
C |
C1 |
H3 |
196.1 |
300.0 |
H6 |
C |
C1 |
H4 |
314.5 |
180.0 |
H7 |
N |
C |
H5 |
301.3 |
60.0 |
H7 |
N |
C |
H6 |
58.7 |
300.0 |
H8 |
N |
C |
H5 |
61.3 |
184.0 |
H8 |
N |
C |
H6 |
178.7 |
64.0 |
H10 |
C15 |
C7 |
C6 |
178.5 |
180.1 |
H10 |
C15 |
C3 |
C4 |
181.8 |
180.2 |
C7 |
C6 |
H11 |
C5 |
180.0 |
179.9 |
H11 |
C6 |
C5 |
H12 |
1.6 |
0.0 |
H12 |
C5 |
C6 |
H11 |
1.6 |
0.0 |
C3 |
C4 |
H13 |
C5 |
180.0 |
179.7 |
H13 |
C4 |
C5 |
H12 |
358.7 |
359.9 |
C9 |
C8 |
H14 |
H15 |
122.6 |
240.0 |
C9 |
C8 |
H15 |
H14 |
237.5 |
120.0 |
H16 |
C9 |
C8 |
H14 |
66.2 |
295.0 |
H16 |
C9 |
C8 |
H15 |
188.0 |
175.0 |
H16 |
C9 |
C14 |
H17 |
57.5 |
60.0 |
H16 |
C9 |
C14 |
H18 |
176.3 |
180.0 |
H17 |
C14 |
C9 |
H16 |
57.5 |
60.0 |
C9 |
C14 |
H17 |
H18 |
118.0 |
120.0 |
C13 |
C14 |
H17 |
H18 |
242.0 |
240.0 |
H18 |
C14 |
C9 |
H16 |
176.3 |
180.0 |
C9 |
C14 |
H18 |
H17 |
242.0 |
240.0 |
C13 |
C14 |
H18 |
H17 |
118.0 |
120.0 |
C12 |
C13 |
H19 |
H20 |
118.8 |
240.0 |
H19 |
C13 |
C14 |
H17 |
67.1 |
300.0 |
H19 |
C13 |
C14 |
H18 |
308.4 |
180.0 |
C12 |
C13 |
H20 |
H19 |
241.2 |
120.0 |
H20 |
C13 |
C14 |
H17 |
307.9 |
60.0 |
H20 |
C13 |
C14 |
H18 |
189.2 |
300.0 |
C11 |
C12 |
H21 |
H22 |
119.3 |
240.0 |
H21 |
C12 |
C13 |
H19 |
51.2 |
60.0 |
H21 |
C12 |
C13 |
H20 |
170.4 |
300.0 |
C11 |
C12 |
H22 |
H21 |
240.7 |
120.0 |
H22 |
C12 |
C13 |
H19 |
291.6 |
180.0 |
H22 |
C12 |
C13 |
H20 |
50.8 |
60.0 |
C10 |
C11 |
H23 |
H24 |
119.0 |
240.0 |
H23 |
C11 |
C10 |
H25 |
300.3 |
180.0 |
H23 |
C11 |
C10 |
H26 |
59.8 |
60.0 |
H23 |
C11 |
C12 |
H21 |
304.4 |
300.0 |
H23 |
C11 |
C12 |
H22 |
64.0 |
180.0 |
C10 |
C11 |
H24 |
H23 |
241.0 |
120.0 |
H24 |
C11 |
C10 |
H25 |
59.6 |
60.0 |
H24 |
C11 |
C10 |
H26 |
179.2 |
300.0 |
H24 |
C11 |
C12 |
H21 |
185.1 |
60.0 |
H24 |
C11 |
C12 |
H22 |
304.6 |
300.0 |
H25 |
C10 |
C11 |
H23 |
300.3 |
180.0 |
H25 |
C10 |
C11 |
H24 |
59.6 |
60.0 |
C11 |
C10 |
H25 |
H26 |
119.3 |
239.9 |
H25 |
C10 |
C9 |
H16 |
299.6 |
180.0 |
H26 |
C10 |
C11 |
H23 |
59.8 |
60.0 |
H26 |
C10 |
C11 |
H24 |
179.2 |
300.0 |
C11 |
C10 |
H26 |
H25 |
240.7 |
120.0 |
H26 |
C10 |
C9 |
H16 |
180.1 |
300.0 |